RNA–Protein interactions for RNA: ENST00000492462.1

MDC1-207, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 3

Gene MDC1, Length 819 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-207ENST00000492462 CLTAP09496 248 aa12.86□□□□□ -0.35
MDC1-207ENST00000492462 TXLNAP40222 546 aa12.86□□□□□ -0.35
MDC1-207ENST00000492462 STAT6P42226 847 aa12.86□□□□□ -0.35
MDC1-207ENST00000492462 GUCY2FP51841 1108 aa12.86□□□□□ -0.35
MDC1-207ENST00000492462 KCNA1Q09470 495 aa12.86□□□□□ -0.35
MDC1-207ENST00000492462 ELAVL2Q12926 359 aaKnown RBP12.86□□□□□ -0.35
MDC1-207ENST00000492462 ENOX2Q16206 610 aaKnown RBP12.86□□□□□ -0.35
MDC1-207ENST00000492462 SHC4Q6S5L8 630 aa12.86□□□□□ -0.35
MDC1-207ENST00000492462 PDZRN4Q6ZMN7 1036 aaPredicted RBP12.86□□□□□ -0.35
MDC1-207ENST00000492462 SV2BQ7L1I2 683 aa12.86□□□□□ -0.35
MDC1-207ENST00000492462 MAP4K3Q8IVH8 894 aa12.86□□□□□ -0.35
MDC1-207ENST00000492462 KREMEN2Q8NCW0 462 aa12.86□□□□□ -0.35
MDC1-207ENST00000492462 CMASQ8NFW8 434 aaPredicted RBP12.86□□□□□ -0.35
MDC1-207ENST00000492462 DDX27Q96GQ7 796 aaKnown RBP12.86□□□□□ -0.35
MDC1-207ENST00000492462 CHAMP1Q96JM3 812 aa12.86□□□□□ -0.35
MDC1-207ENST00000492462 UROC1Q96N76 676 aa12.86□□□□□ -0.35
MDC1-207ENST00000492462 ZNF396Q96N95 335 aaPredicted RBP12.86□□□□□ -0.35
MDC1-207ENST00000492462 FGFBP2Q9BYJ0 223 aa12.86□□□□□ -0.35
MDC1-207ENST00000492462 SMOC2Q9H3U7 446 aa12.86□□□□□ -0.35
MDC1-207ENST00000492462 DAXXQ9UER7 740 aaPredicted RBP12.86□□□□□ -0.35
MDC1-207ENST00000492462 CHD8Q9HCK8 2581 aa12.85□□□□□ -0.35
MDC1-207ENST00000492462 A0A0B4J269 797 aa12.85□□□□□ -0.35
MDC1-207ENST00000492462 CCDC195A0A1B0GUA6 201 aa12.85□□□□□ -0.35
MDC1-207ENST00000492462 LACTBL1A8MY62 500 aa12.85□□□□□ -0.35
MDC1-207ENST00000492462 PPP1R37O75864 691 aa12.85□□□□□ -0.35
MDC1-207ENST00000492462 ASGR2P07307 311 aa12.85□□□□□ -0.35
MDC1-207ENST00000492462 CASP5P51878 434 aa12.85□□□□□ -0.35
MDC1-207ENST00000492462 ZXDAP98168 799 aa12.85□□□□□ -0.35
MDC1-207ENST00000492462 E2F4Q16254 413 aa12.85□□□□□ -0.35
MDC1-207ENST00000492462 AXDND1Q5T1B0 1012 aaPredicted RBP12.85□□□□□ -0.35
MDC1-207ENST00000492462 CCDC73Q6ZRK6 1079 aa12.85□□□□□ -0.35
MDC1-207ENST00000492462 ZNF720Q7Z2F6 126 aa12.85□□□□□ -0.35
MDC1-207ENST00000492462 EDAQ92838 391 aa12.85□□□□□ -0.35
MDC1-207ENST00000492462 MSTO1Q9BUK6 570 aa12.85□□□□□ -0.35
MDC1-207ENST00000492462 STRA6Q9BX79 667 aa12.85□□□□□ -0.35
MDC1-207ENST00000492462 ST6GALNAC4Q9H4F1 302 aa12.85□□□□□ -0.35
MDC1-207ENST00000492462 SLC38A7Q9NVC3 462 aa12.85□□□□□ -0.35
MDC1-207ENST00000492462 PPEF2O14830 753 aa12.84□□□□□ -0.35
MDC1-207ENST00000492462 OGTO15294 1046 aa12.84□□□□□ -0.35
MDC1-207ENST00000492462 N4BP1O75113 896 aaKnown RBP12.84□□□□□ -0.35
MDC1-207ENST00000492462 PPP6R2O75170 966 aa12.84□□□□□ -0.35
MDC1-207ENST00000492462 YEATS4O95619 227 aa12.84□□□□□ -0.35
MDC1-207ENST00000492462 IDEP14735 1019 aa12.84□□□□□ -0.35
MDC1-207ENST00000492462 OR1D2P34982 312 aa12.84□□□□□ -0.35
MDC1-207ENST00000492462 CREMQ03060 361 aa12.84□□□□□ -0.35
MDC1-207ENST00000492462 ZBTB6Q15916 424 aa12.84□□□□□ -0.35
MDC1-207ENST00000492462 PTPN21Q16825 1174 aa12.84□□□□□ -0.35
MDC1-207ENST00000492462 C15orf39Q6ZRI6 1047 aa12.84□□□□□ -0.35
MDC1-207ENST00000492462 TRIM67Q6ZTA4 783 aa12.84□□□□□ -0.35
MDC1-207ENST00000492462 HFE2Q6ZVN8 426 aa12.84□□□□□ -0.35
MDC1-207ENST00000492462 ZSWIM2Q8NEG5 633 aa12.84□□□□□ -0.35
MDC1-207ENST00000492462 PRSS33Q8NF86 280 aa12.84□□□□□ -0.35
MDC1-207ENST00000492462 SMG7Q92540 1137 aaKnown RBP12.84□□□□□ -0.35
MDC1-207ENST00000492462 KIF12Q96FN5 646 aa12.84□□□□□ -0.35
MDC1-207ENST00000492462 PLEKHA4Q9H4M7 779 aa12.84□□□□□ -0.35
MDC1-207ENST00000492462 MTRRQ9UBK8 725 aa12.84□□□□□ -0.35
MDC1-207ENST00000492462 LIMD1Q9UGP4 676 aa12.84□□□□□ -0.35
MDC1-207ENST00000492462 FBXW11Q9UKB1 542 aa12.84□□□□□ -0.35
MDC1-207ENST00000492462 CPSF3Q9UKF6 684 aaKnown RBP12.84□□□□□ -0.35
MDC1-207ENST00000492462 ZDHHC9Q9Y397 364 aa12.84□□□□□ -0.35
MDC1-207ENST00000492462 NR2E1Q9Y466 385 aa12.84□□□□□ -0.35
MDC1-207ENST00000492462 CDY1Q9Y6F8 540 aa12.84□□□□□ -0.35
MDC1-207ENST00000492462 SCN1AP35498 2009 aa12.83□□□□□ -0.36
MDC1-207ENST00000492462 NOTCH4Q99466 2003 aa12.83□□□□□ -0.36
MDC1-207ENST00000492462 FRMD3A2A2Y4 597 aa12.83□□□□□ -0.36
MDC1-207ENST00000492462 CUTAO60888 179 aa12.83□□□□□ -0.36
MDC1-207ENST00000492462 ZMYND10O75800 440 aa12.83□□□□□ -0.36
MDC1-207ENST00000492462 GAP43P17677 238 aa12.83□□□□□ -0.36
MDC1-207ENST00000492462 ADSSP30520 456 aa12.83□□□□□ -0.36
MDC1-207ENST00000492462 RPL9P32969 192 aaKnown RBP12.83□□□□□ -0.36
MDC1-207ENST00000492462 ACOT2P49753 483 aa12.83□□□□□ -0.36
MDC1-207ENST00000492462 DNM1Q05193 864 aaKnown RBP12.83□□□□□ -0.36
MDC1-207ENST00000492462 PPP2R3AQ06190 1150 aa12.83□□□□□ -0.36
MDC1-207ENST00000492462 RAB33AQ14088 237 aa12.83□□□□□ -0.36
MDC1-207ENST00000492462 VARS2Q5ST30 1063 aaKnown RBP12.83□□□□□ -0.36
MDC1-207ENST00000492462 CCDC149Q6ZUS6 474 aa12.83□□□□□ -0.36
MDC1-207ENST00000492462 ZDHHC14Q8IZN3 488 aa12.83□□□□□ -0.36
MDC1-207ENST00000492462 TDRD5Q8NAT2 981 aaKnown RBP12.83□□□□□ -0.36
MDC1-207ENST00000492462 GLIS3Q8NEA6 775 aa12.83□□□□□ -0.36
MDC1-207ENST00000492462 HDAC7Q8WUI4 952 aa12.83□□□□□ -0.36
MDC1-207ENST00000492462 HPS3Q969F9 1004 aa12.83□□□□□ -0.36
MDC1-207ENST00000492462 FAM212AQ96EL1 285 aa12.83□□□□□ -0.36
MDC1-207ENST00000492462 MRPL44Q9H9J2 332 aaKnown RBP12.83□□□□□ -0.36
MDC1-207ENST00000492462 RPF1Q9H9Y2 349 aaKnown RBP12.83□□□□□ -0.36
MDC1-207ENST00000492462 PLEKHA5Q9HAU0 1116 aa12.83□□□□□ -0.36
MDC1-207ENST00000492462 WDR6Q9NNW5 1121 aaKnown RBP12.83□□□□□ -0.36
MDC1-207ENST00000492462 USTQ9Y2C2 406 aa12.83□□□□□ -0.36
MDC1-207ENST00000492462 NUB1Q9Y5A7 615 aa12.83□□□□□ -0.36
MDC1-207ENST00000492462 STYXL1Q9Y6J8 313 aa12.83□□□□□ -0.36
MDC1-207ENST00000492462 MYO15AQ9UKN7 3530 aa12.83□□□□□ -0.36
MDC1-207ENST00000492462 TMEM221A6NGB7 291 aa12.82□□□□□ -0.36
MDC1-207ENST00000492462 M0R296 226 aa12.82□□□□□ -0.36
MDC1-207ENST00000492462 TRAPPC3O43617 180 aa12.82□□□□□ -0.36
MDC1-207ENST00000492462 TBC1D4O60343 1298 aa12.82□□□□□ -0.36
MDC1-207ENST00000492462 PAPLNO95428 1278 aa12.82□□□□□ -0.36
MDC1-207ENST00000492462 C1RP00736 705 aa12.82□□□□□ -0.36
MDC1-207ENST00000492462 C8AP07357 584 aa12.82□□□□□ -0.36
MDC1-207ENST00000492462 ADRB2P07550 413 aa12.82□□□□□ -0.36
MDC1-207ENST00000492462 NFICP08651 508 aa12.82□□□□□ -0.36
MDC1-207ENST00000492462 SCP2P22307 547 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 63.9 ms