RNA–Protein interactions for RNA: ENST00000491659.5

USP39-217, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 648 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-217ENST00000491659 SLC39A4Q6P5W5 647 aa16.43■□□□□ 0.22
USP39-217ENST00000491659 SPATA31D4Q6ZUB0 917 aa16.43■□□□□ 0.22
USP39-217ENST00000491659 ANKS3Q6ZW76 656 aa16.43■□□□□ 0.22
USP39-217ENST00000491659 ZNF720Q7Z2F6 126 aa16.43■□□□□ 0.22
USP39-217ENST00000491659 KREMEN2Q8NCW0 462 aa16.43■□□□□ 0.22
USP39-217ENST00000491659 TSPAN18Q96SJ8 248 aa16.43■□□□□ 0.22
USP39-217ENST00000491659 CLSTN3Q9BQT9 956 aa16.43■□□□□ 0.22
USP39-217ENST00000491659 TNMDQ9H2S6 317 aa16.43■□□□□ 0.22
USP39-217ENST00000491659 OLFML3Q9NRN5 406 aa16.43■□□□□ 0.22
USP39-217ENST00000491659 ZDHHC7Q9NXF8 308 aa16.43■□□□□ 0.22
USP39-217ENST00000491659 MTRRQ9UBK8 725 aa16.43■□□□□ 0.22
USP39-217ENST00000491659 TUBGCP4Q9UGJ1 667 aa16.43■□□□□ 0.22
USP39-217ENST00000491659 UBQLN1Q9UMX0 589 aaKnown RBP16.43■□□□□ 0.22
USP39-217ENST00000491659 EXOC7Q9UPT5 735 aa16.43■□□□□ 0.22
USP39-217ENST00000491659 USTQ9Y2C2 406 aa16.43■□□□□ 0.22
USP39-217ENST00000491659 SYN3O14994 580 aa16.42■□□□□ 0.22
USP39-217ENST00000491659 FAM189A1O60320 539 aa16.42■□□□□ 0.22
USP39-217ENST00000491659 RFPL2O75678 378 aa16.42■□□□□ 0.22
USP39-217ENST00000491659 PPP1R37O75864 691 aa16.42■□□□□ 0.22
USP39-217ENST00000491659 MCM4P33991 863 aa16.42■□□□□ 0.22
USP39-217ENST00000491659 ME1P48163 572 aa16.42■□□□□ 0.22
USP39-217ENST00000491659 SPAG1Q07617 926 aa16.42■□□□□ 0.22
USP39-217ENST00000491659 ALCAMQ13740 583 aa16.42■□□□□ 0.22
USP39-217ENST00000491659 ENOX2Q16206 610 aaKnown RBP16.42■□□□□ 0.22
USP39-217ENST00000491659 ZBTB41Q5SVQ8 909 aa16.42■□□□□ 0.22
USP39-217ENST00000491659 ADALQ6DHV7 355 aa16.42■□□□□ 0.22
USP39-217ENST00000491659 LILRA6Q6PI73 481 aa16.42■□□□□ 0.22
USP39-217ENST00000491659 CD300LGQ6UXG3 332 aa16.42■□□□□ 0.22
USP39-217ENST00000491659 CD302Q8IX05 232 aa16.42■□□□□ 0.22
USP39-217ENST00000491659 CCDC65Q8IXS2 484 aa16.42■□□□□ 0.22
USP39-217ENST00000491659 SMG7Q92540 1137 aaKnown RBP16.42■□□□□ 0.22
USP39-217ENST00000491659 STAMQ92783 540 aa16.42■□□□□ 0.22
USP39-217ENST00000491659 DHX58Q96C10 678 aa16.42■□□□□ 0.22
USP39-217ENST00000491659 ACSF2Q96CM8 615 aaPredicted RBP16.42■□□□□ 0.22
USP39-217ENST00000491659 FAM212AQ96EL1 285 aa16.42■□□□□ 0.22
USP39-217ENST00000491659 ACCSQ96QU6 501 aa16.42■□□□□ 0.22
USP39-217ENST00000491659 RHOBTB2Q9BYZ6 727 aa16.42■□□□□ 0.22
USP39-217ENST00000491659 PIDD1Q9HB75 910 aa16.42■□□□□ 0.22
USP39-217ENST00000491659 PANK4Q9NVE7 773 aa16.42■□□□□ 0.22
USP39-217ENST00000491659 TBC1D7Q9P0N9 293 aa16.42■□□□□ 0.22
USP39-217ENST00000491659 FBXW11Q9UKB1 542 aa16.42■□□□□ 0.22
USP39-217ENST00000491659 FRMD3A2A2Y4 597 aa16.41■□□□□ 0.22
USP39-217ENST00000491659 LACTBL1A8MY62 500 aa16.41■□□□□ 0.22
USP39-217ENST00000491659 ANKRD63C9JTQ0 380 aa16.41■□□□□ 0.22
USP39-217ENST00000491659 CYP3A5P20815 502 aa16.41■□□□□ 0.22
USP39-217ENST00000491659 IGFBP6P24592 240 aaPredicted RBP16.41■□□□□ 0.22
USP39-217ENST00000491659 AMPD3Q01432 767 aa16.41■□□□□ 0.22
USP39-217ENST00000491659 E2F4Q16254 413 aa16.41■□□□□ 0.22
USP39-217ENST00000491659 PTPN21Q16825 1174 aa16.41■□□□□ 0.22
USP39-217ENST00000491659 L1TD1Q5T7N2 865 aaKnown RBP16.41■□□□□ 0.22
USP39-217ENST00000491659 SHC4Q6S5L8 630 aa16.41■□□□□ 0.22
USP39-217ENST00000491659 OTOP3Q7RTS5 596 aa16.41■□□□□ 0.22
USP39-217ENST00000491659 PLCD3Q8N3E9 789 aa16.41■□□□□ 0.22
USP39-217ENST00000491659 IQUBQ8NA54 791 aa16.41■□□□□ 0.22
USP39-217ENST00000491659 FEZF2Q8TBJ5 459 aa16.41■□□□□ 0.22
USP39-217ENST00000491659 POMGNT1Q8WZA1 660 aa16.41■□□□□ 0.22
USP39-217ENST00000491659 EDAQ92838 391 aa16.41■□□□□ 0.22
USP39-217ENST00000491659 MAGEF1Q9HAY2 307 aa16.41■□□□□ 0.22
USP39-217ENST00000491659 FAM13BQ9NYF5 915 aa16.41■□□□□ 0.22
USP39-217ENST00000491659 CPSF3Q9UKF6 684 aaKnown RBP16.41■□□□□ 0.22
USP39-217ENST00000491659 AGO2Q9UKV8 859 aaKnown RBP16.41■□□□□ 0.22
USP39-217ENST00000491659 PCDHB13Q9Y5F0 798 aa16.41■□□□□ 0.22
USP39-217ENST00000491659 BACE2Q9Y5Z0 518 aa16.41■□□□□ 0.22
USP39-217ENST00000491659 CDY1Q9Y6F8 540 aa16.41■□□□□ 0.22
USP39-217ENST00000491659 CLUHO75153 1309 aa16.41■□□□□ 0.22
USP39-217ENST00000491659 TISP43B9A030 160 aa16.4■□□□□ 0.22
USP39-217ENST00000491659 H7C4K7 107 aa16.4■□□□□ 0.22
USP39-217ENST00000491659 ZMYND10O75800 440 aa16.4■□□□□ 0.22
USP39-217ENST00000491659 C8AP07357 584 aa16.4■□□□□ 0.22
USP39-217ENST00000491659 LRPAP1P30533 357 aa16.4■□□□□ 0.22
USP39-217ENST00000491659 OR1D2P34982 312 aa16.4■□□□□ 0.22
USP39-217ENST00000491659 ZXDAP98168 799 aa16.4■□□□□ 0.22
USP39-217ENST00000491659 DNM1Q05193 864 aaKnown RBP16.4■□□□□ 0.22
USP39-217ENST00000491659 RAB33AQ14088 237 aa16.4■□□□□ 0.22
USP39-217ENST00000491659 POSTNQ15063 836 aa16.4■□□□□ 0.22
USP39-217ENST00000491659 PPM1LQ5SGD2 360 aa16.4■□□□□ 0.22
USP39-217ENST00000491659 VARS2Q5ST30 1063 aaKnown RBP16.4■□□□□ 0.22
USP39-217ENST00000491659 AXDND1Q5T1B0 1012 aaPredicted RBP16.4■□□□□ 0.22
USP39-217ENST00000491659 STXBP4Q6ZWJ1 553 aa16.4■□□□□ 0.22
USP39-217ENST00000491659 ZDHHC14Q8IZN3 488 aa16.4■□□□□ 0.22
USP39-217ENST00000491659 SYCP3Q8IZU3 236 aa16.4■□□□□ 0.22
USP39-217ENST00000491659 BEST2Q8NFU1 509 aa16.4■□□□□ 0.22
USP39-217ENST00000491659 SUSD3Q96L08 255 aa16.4■□□□□ 0.22
USP39-217ENST00000491659 STRA6Q9BX79 667 aa16.4■□□□□ 0.22
USP39-217ENST00000491659 PRKD2Q9BZL6 878 aa16.4■□□□□ 0.22
USP39-217ENST00000491659 HCN4Q9Y3Q4 1203 aa16.4■□□□□ 0.22
USP39-217ENST00000491659 STYXL1Q9Y6J8 313 aa16.4■□□□□ 0.22
USP39-217ENST00000491659 ADAM12O43184 909 aa16.39■□□□□ 0.21
USP39-217ENST00000491659 ACOT2P49753 483 aa16.39■□□□□ 0.21
USP39-217ENST00000491659 ASIC1P78348 528 aa16.39■□□□□ 0.21
USP39-217ENST00000491659 TMEM132DQ14C87 1099 aa16.39■□□□□ 0.21
USP39-217ENST00000491659 ZBTB6Q15916 424 aa16.39■□□□□ 0.21
USP39-217ENST00000491659 JADE1Q6IE81 842 aa16.39■□□□□ 0.21
USP39-217ENST00000491659 ZNF280DQ6N043 979 aa16.39■□□□□ 0.21
USP39-217ENST00000491659 APPL2Q8NEU8 664 aa16.39■□□□□ 0.21
USP39-217ENST00000491659 ZNF707Q96C28 371 aaPredicted RBP16.39■□□□□ 0.21
USP39-217ENST00000491659 PYM1Q9BRP8 204 aaKnown RBP16.39■□□□□ 0.21
USP39-217ENST00000491659 TRIM9Q9C026 710 aa16.39■□□□□ 0.21
USP39-217ENST00000491659 WDR6Q9NNW5 1121 aaKnown RBP16.39■□□□□ 0.21
USP39-217ENST00000491659 KBTBD4Q9NVX7 518 aa16.39■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms