RNA–Protein interactions for RNA: ENST00000491334.1

CDK5RAP2-218, Transcript of CDK5 regulatory subunit associated protein 2, human

TSL 2

Gene CDK5RAP2, Length 546 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CDK5RAP2-218	ENST00000491334	SH2B1	Q9NRF2	756 aa	Predicted RBP	21.24	■□□□□ 0.99
CDK5RAP2-218	ENST00000491334	SNX14	Q9Y5W7	946 aa		21.24	■□□□□ 0.99
CDK5RAP2-218	ENST00000491334	WDR27	A2RRH5	827 aa		21.23	■□□□□ 0.99
CDK5RAP2-218	ENST00000491334	TM4SF5	O14894	197 aa		21.23	■□□□□ 0.99
CDK5RAP2-218	ENST00000491334	XRCC6	P12956	609 aa	Known RBP eCLIP	21.23	■□□□□ 0.99
CDK5RAP2-218	ENST00000491334	ATF2	P15336	505 aa		21.23	■□□□□ 0.99
CDK5RAP2-218	ENST00000491334	RARRES1	P49788	294 aa		21.23	■□□□□ 0.99
CDK5RAP2-218	ENST00000491334	ROR1	Q01973	937 aa		21.23	■□□□□ 0.99
CDK5RAP2-218	ENST00000491334	PRPF4B	Q13523	1007 aa	Known RBP	21.23	■□□□□ 0.99
CDK5RAP2-218	ENST00000491334	GAS6	Q14393	721 aa		21.23	■□□□□ 0.99
CDK5RAP2-218	ENST00000491334	HEATR6	Q6AI08	1181 aa	Known RBP	21.23	■□□□□ 0.99
CDK5RAP2-218	ENST00000491334	IQCE	Q6IPM2	695 aa		21.23	■□□□□ 0.99
CDK5RAP2-218	ENST00000491334	NOSTRIN	Q8IVI9	506 aa		21.23	■□□□□ 0.99
CDK5RAP2-218	ENST00000491334	MFSD6L	Q8IWD5	586 aa		21.23	■□□□□ 0.99
CDK5RAP2-218	ENST00000491334	TCEAL8	Q8IYN2	117 aa		21.23	■□□□□ 0.99
CDK5RAP2-218	ENST00000491334	CSGALNACT1	Q8TDX6	532 aa		21.23	■□□□□ 0.99
CDK5RAP2-218	ENST00000491334	DDX27	Q96GQ7	796 aa	Known RBP	21.23	■□□□□ 0.99
CDK5RAP2-218	ENST00000491334	ZNF512	Q96ME7	567 aa	Predicted RBP	21.23	■□□□□ 0.99
CDK5RAP2-218	ENST00000491334	CXCL16	Q9H2A7	254 aa		21.23	■□□□□ 0.99
CDK5RAP2-218	ENST00000491334	PDZD7	Q9H5P4	517 aa		21.23	■□□□□ 0.99
CDK5RAP2-218	ENST00000491334	CYP4F11	Q9HBI6	524 aa		21.23	■□□□□ 0.99
CDK5RAP2-218	ENST00000491334	PCDHA12	Q9UN75	941 aa		21.23	■□□□□ 0.99
CDK5RAP2-218	ENST00000491334	KCNJ14	Q9UNX9	436 aa		21.23	■□□□□ 0.99
CDK5RAP2-218	ENST00000491334	SDK1	Q7Z5N4	2213 aa		21.23	■□□□□ 0.99
CDK5RAP2-218	ENST00000491334		K7ESF4	209 aa		21.22	■□□□□ 0.99
CDK5RAP2-218	ENST00000491334	HOXA6	P31267	233 aa		21.22	■□□□□ 0.99
CDK5RAP2-218	ENST00000491334	CLCNKB	P51801	687 aa		21.22	■□□□□ 0.99
CDK5RAP2-218	ENST00000491334	COL9A2	Q14055	689 aa	Predicted RBP	21.22	■□□□□ 0.99
CDK5RAP2-218	ENST00000491334	POTED	Q86YR6	584 aa		21.22	■□□□□ 0.99
CDK5RAP2-218	ENST00000491334	E2F7	Q96AV8	911 aa		21.22	■□□□□ 0.99
CDK5RAP2-218	ENST00000491334	ZSWIM3	Q96MP5	696 aa		21.22	■□□□□ 0.99
CDK5RAP2-218	ENST00000491334	AIFM3	Q96NN9	605 aa		21.22	■□□□□ 0.99
CDK5RAP2-218	ENST00000491334	C2orf40	Q9H1Z8	148 aa		21.22	■□□□□ 0.99
CDK5RAP2-218	ENST00000491334	C8orf33	Q9H7E9	229 aa	Predicted RBP	21.22	■□□□□ 0.99
CDK5RAP2-218	ENST00000491334	TRPV4	Q9HBA0	871 aa		21.22	■□□□□ 0.99
CDK5RAP2-218	ENST00000491334	GDA	Q9Y2T3	454 aa		21.22	■□□□□ 0.99
CDK5RAP2-218	ENST00000491334	PROS1	P07225	676 aa		21.21	■□□□□ 0.99
CDK5RAP2-218	ENST00000491334	ZNF806	P0C7X5	589 aa		21.21	■□□□□ 0.99
CDK5RAP2-218	ENST00000491334	IGFBP6	P24592	240 aa	Predicted RBP	21.21	■□□□□ 0.99
CDK5RAP2-218	ENST00000491334	HSPA4	P34932	840 aa		21.21	■□□□□ 0.99
CDK5RAP2-218	ENST00000491334	VIPR2	P41587	438 aa		21.21	■□□□□ 0.99
CDK5RAP2-218	ENST00000491334	CCR2	P41597	374 aa		21.21	■□□□□ 0.99
CDK5RAP2-218	ENST00000491334	MAPK6	Q16659	721 aa		21.21	■□□□□ 0.99
CDK5RAP2-218	ENST00000491334	UPP1	Q16831	310 aa		21.21	■□□□□ 0.99
CDK5RAP2-218	ENST00000491334	DGKK	Q5KSL6	1271 aa		21.21	■□□□□ 0.99
CDK5RAP2-218	ENST00000491334	CDCA2	Q69YH5	1023 aa	Predicted RBP	21.21	■□□□□ 0.99
CDK5RAP2-218	ENST00000491334	PIK3AP1	Q6ZUJ8	805 aa		21.21	■□□□□ 0.99
CDK5RAP2-218	ENST00000491334	MAEA	Q7L5Y9	396 aa		21.21	■□□□□ 0.99
CDK5RAP2-218	ENST00000491334	YAF2	Q8IY57	180 aa		21.21	■□□□□ 0.99
CDK5RAP2-218	ENST00000491334	LEMD2	Q8NC56	503 aa		21.21	■□□□□ 0.99
CDK5RAP2-218	ENST00000491334	LOXL4	Q96JB6	756 aa		21.21	■□□□□ 0.99
CDK5RAP2-218	ENST00000491334	GPR88	Q9GZN0	384 aa		21.21	■□□□□ 0.99
CDK5RAP2-218	ENST00000491334	VWA8	A3KMH1	1905 aa		21.21	■□□□□ 0.99
CDK5RAP2-218	ENST00000491334		H7C4K7	107 aa		21.2	■□□□□ 0.98
CDK5RAP2-218	ENST00000491334	NRG2	O14511	850 aa	Predicted RBP	21.2	■□□□□ 0.98
CDK5RAP2-218	ENST00000491334	AXIN1	O15169	862 aa		21.2	■□□□□ 0.98
CDK5RAP2-218	ENST00000491334	USO1	O60763	962 aa	Known RBP	21.2	■□□□□ 0.98
CDK5RAP2-218	ENST00000491334	XBP1	P17861	261 aa		21.2	■□□□□ 0.98
CDK5RAP2-218	ENST00000491334	KPNA1	P52294	538 aa	Predicted RBP	21.2	■□□□□ 0.98
CDK5RAP2-218	ENST00000491334	ARPP19	P56211	112 aa		21.2	■□□□□ 0.98
CDK5RAP2-218	ENST00000491334	TPGS2	Q68CL5	300 aa		21.2	■□□□□ 0.98
CDK5RAP2-218	ENST00000491334	CD300LG	Q6UXG3	332 aa		21.2	■□□□□ 0.98
CDK5RAP2-218	ENST00000491334	MCPH1	Q8NEM0	835 aa		21.2	■□□□□ 0.98
CDK5RAP2-218	ENST00000491334	ZSCAN18	Q8TBC5	510 aa	Predicted RBP	21.2	■□□□□ 0.98
CDK5RAP2-218	ENST00000491334	PIGO	Q8TEQ8	1089 aa		21.2	■□□□□ 0.98
CDK5RAP2-218	ENST00000491334	PPP1R10	Q96QC0	940 aa	Known RBP	21.2	■□□□□ 0.98
CDK5RAP2-218	ENST00000491334	ARRDC1-AS1	Q9H2J1	176 aa		21.2	■□□□□ 0.98
CDK5RAP2-218	ENST00000491334	GPRC5C	Q9NQ84	441 aa		21.2	■□□□□ 0.98
CDK5RAP2-218	ENST00000491334	INSL5	Q9Y5Q6	135 aa		21.2	■□□□□ 0.98
CDK5RAP2-218	ENST00000491334	TTLL13P	A6NNM8	815 aa		21.19	■□□□□ 0.98
CDK5RAP2-218	ENST00000491334		I3L4J1	428 aa		21.19	■□□□□ 0.98
CDK5RAP2-218	ENST00000491334	ACKR2	O00590	384 aa		21.19	■□□□□ 0.98
CDK5RAP2-218	ENST00000491334	CDC45	O75419	566 aa		21.19	■□□□□ 0.98
CDK5RAP2-218	ENST00000491334	BRCC3	P46736	316 aa		21.19	■□□□□ 0.98
CDK5RAP2-218	ENST00000491334	SF3A2	Q15428	464 aa	Known RBP	21.19	■□□□□ 0.98
CDK5RAP2-218	ENST00000491334	DCAF4L1	Q3SXM0	396 aa		21.19	■□□□□ 0.98
CDK5RAP2-218	ENST00000491334	WDR5B	Q86VZ2	330 aa		21.19	■□□□□ 0.98
CDK5RAP2-218	ENST00000491334	ZNF274	Q96GC6	653 aa	Predicted RBP	21.19	■□□□□ 0.98
CDK5RAP2-218	ENST00000491334	RBM12	Q9NTZ6	932 aa	Known RBP	21.19	■□□□□ 0.98
CDK5RAP2-218	ENST00000491334	MAFF	Q9ULX9	164 aa		21.19	■□□□□ 0.98
CDK5RAP2-218	ENST00000491334	HEPACAM2	A8MVW5	462 aa		21.18	■□□□□ 0.98
CDK5RAP2-218	ENST00000491334	ARNTL	O00327	626 aa		21.18	■□□□□ 0.98
CDK5RAP2-218	ENST00000491334	CHAD	O15335	359 aa		21.18	■□□□□ 0.98
CDK5RAP2-218	ENST00000491334	SEC24A	O95486	1093 aa		21.18	■□□□□ 0.98
CDK5RAP2-218	ENST00000491334	PRKCB	P05771	671 aa		21.18	■□□□□ 0.98
CDK5RAP2-218	ENST00000491334	MYL4	P12829	197 aa		21.18	■□□□□ 0.98
CDK5RAP2-218	ENST00000491334	ATP2B1	P20020	1258 aa		21.18	■□□□□ 0.98
CDK5RAP2-218	ENST00000491334	GLRA4	Q5JXX5	417 aa		21.18	■□□□□ 0.98
CDK5RAP2-218	ENST00000491334	STPG1	Q5TH74	334 aa		21.18	■□□□□ 0.98
CDK5RAP2-218	ENST00000491334	APBB1IP	Q7Z5R6	666 aa	Predicted RBP	21.18	■□□□□ 0.98
CDK5RAP2-218	ENST00000491334	HS6ST3	Q8IZP7	471 aa		21.18	■□□□□ 0.98
CDK5RAP2-218	ENST00000491334	FAM200A	Q8TCP9	573 aa		21.18	■□□□□ 0.98
CDK5RAP2-218	ENST00000491334	ARID2	Q68CP9	1835 aa		21.18	■□□□□ 0.98
CDK5RAP2-218	ENST00000491334	ANKRD11	Q6UB99	2663 aa	Predicted RBP	21.17	■□□□□ 0.98
CDK5RAP2-218	ENST00000491334		A0A087WWV3	80 aa		21.17	■□□□□ 0.98
CDK5RAP2-218	ENST00000491334	SYN3	O14994	580 aa		21.17	■□□□□ 0.98
CDK5RAP2-218	ENST00000491334	LIG1	P18858	919 aa		21.17	■□□□□ 0.98
CDK5RAP2-218	ENST00000491334	CACNA2D4	Q7Z3S7	1137 aa		21.17	■□□□□ 0.98
CDK5RAP2-218	ENST00000491334	SYNPO	Q8N3V7	929 aa		21.17	■□□□□ 0.98
CDK5RAP2-218	ENST00000491334	LSM14B	Q9BX40	385 aa	Known RBP	21.17	■□□□□ 0.98

Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms