RNA–Protein interactions for RNA: ENST00000490833.5

FN1-223, Transcript of fibronectin 1, humanhuman

TSL 3

Gene FN1, Length 699 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-223ENST00000490833 PARVAQ9NVD7 372 aa6.78□□□□□ -1.32
FN1-223ENST00000490833 DDX56Q9NY93 547 aaKnown RBP6.78□□□□□ -1.32
FN1-223ENST00000490833 WHRNQ9P202 907 aa6.78□□□□□ -1.32
FN1-223ENST00000490833 WDR35Q9P2L0 1181 aa6.78□□□□□ -1.32
FN1-223ENST00000490833 IP6K2Q9UHH9 426 aa6.78□□□□□ -1.32
FN1-223ENST00000490833 AGO2Q9UKV8 859 aaKnown RBP6.78□□□□□ -1.32
FN1-223ENST00000490833 ZNF214Q9UL59 606 aaPredicted RBP6.78□□□□□ -1.32
FN1-223ENST00000490833 KIAA1257Q9ULG3 409 aa6.78□□□□□ -1.32
FN1-223ENST00000490833 CNTN6Q9UQ52 1028 aa6.78□□□□□ -1.32
FN1-223ENST00000490833 EFR3BQ9Y2G0 817 aa6.78□□□□□ -1.32
FN1-223ENST00000490833 AFG3L2Q9Y4W6 797 aa6.78□□□□□ -1.32
FN1-223ENST00000490833 TNS1Q9HBL0 1735 aaKnown RBP6.77□□□□□ -1.33
FN1-223ENST00000490833 ASB14A6NK59 587 aa6.77□□□□□ -1.33
FN1-223ENST00000490833 FSCN2O14926 492 aa6.77□□□□□ -1.33
FN1-223ENST00000490833 EIF3HO15372 352 aaKnown RBP eCLIP6.77□□□□□ -1.33
FN1-223ENST00000490833 MAGEB2O15479 319 aa6.77□□□□□ -1.33
FN1-223ENST00000490833 CLDN3O15551 220 aa6.77□□□□□ -1.33
FN1-223ENST00000490833 RAD51CO43502 376 aa6.77□□□□□ -1.33
FN1-223ENST00000490833 PHACTR2O75167 634 aa6.77□□□□□ -1.33
FN1-223ENST00000490833 TOM1L1O75674 476 aa6.77□□□□□ -1.33
FN1-223ENST00000490833 TOMM70O94826 608 aa6.77□□□□□ -1.33
FN1-223ENST00000490833 ECEL1O95672 775 aa6.77□□□□□ -1.33
FN1-223ENST00000490833 AGTP01019 485 aa6.77□□□□□ -1.33
FN1-223ENST00000490833 RARGP13631 454 aa6.77□□□□□ -1.33
FN1-223ENST00000490833 ERCC3P19447 782 aa6.77□□□□□ -1.33
FN1-223ENST00000490833 NR1D1P20393 614 aa6.77□□□□□ -1.33
FN1-223ENST00000490833 ABCB4P21439 1286 aa6.77□□□□□ -1.33
FN1-223ENST00000490833 MAPK4P31152 587 aa6.77□□□□□ -1.33
FN1-223ENST00000490833 ARL2P36404 184 aa6.77□□□□□ -1.33
FN1-223ENST00000490833 CARSP49589 748 aaKnown RBP6.77□□□□□ -1.33
FN1-223ENST00000490833 IRAK1P51617 712 aa6.77□□□□□ -1.33
FN1-223ENST00000490833 STAT5BP51692 787 aa6.77□□□□□ -1.33
FN1-223ENST00000490833 HNRNPH2P55795 449 aaKnown RBP6.77□□□□□ -1.33
FN1-223ENST00000490833 UBXN2AP68543 259 aa6.77□□□□□ -1.33
FN1-223ENST00000490833 CCNA1P78396 465 aa6.77□□□□□ -1.33
FN1-223ENST00000490833 SLC7A5Q01650 507 aa6.77□□□□□ -1.33
FN1-223ENST00000490833 PRKCEQ02156 737 aa6.77□□□□□ -1.33
FN1-223ENST00000490833 MCL1Q07820 350 aa6.77□□□□□ -1.33
FN1-223ENST00000490833 PPP3CAQ08209 521 aa6.77□□□□□ -1.33
FN1-223ENST00000490833 IRF5Q13568 498 aa6.77□□□□□ -1.33
FN1-223ENST00000490833 STILQ15468 1287 aa6.77□□□□□ -1.33
FN1-223ENST00000490833 MAPK6Q16659 721 aa6.77□□□□□ -1.33
FN1-223ENST00000490833 CLEC16AQ2KHT3 1053 aa6.77□□□□□ -1.33
FN1-223ENST00000490833 ZACNQ401N2 412 aa6.77□□□□□ -1.33
FN1-223ENST00000490833 DENND2CQ68D51 928 aa6.77□□□□□ -1.33
FN1-223ENST00000490833 DUPD1Q68J44 220 aa6.77□□□□□ -1.33
FN1-223ENST00000490833 METTL7BQ6UX53 244 aa6.77□□□□□ -1.33
FN1-223ENST00000490833 PCGF5Q86SE9 256 aa6.77□□□□□ -1.33
FN1-223ENST00000490833 WDR49Q8IV35 697 aa6.77□□□□□ -1.33
FN1-223ENST00000490833 SULF1Q8IWU6 871 aa6.77□□□□□ -1.33
FN1-223ENST00000490833 RHOT1Q8IXI2 618 aa6.77□□□□□ -1.33
FN1-223ENST00000490833 CCDC105Q8IYK2 499 aa6.77□□□□□ -1.33
FN1-223ENST00000490833 RCOR2Q8IZ40 523 aa6.77□□□□□ -1.33
FN1-223ENST00000490833 ANKS4BQ8N8V4 417 aa6.77□□□□□ -1.33
FN1-223ENST00000490833 SHCBP1Q8NEM2 672 aa6.77□□□□□ -1.33
FN1-223ENST00000490833 REPS2Q8NFH8 660 aa6.77□□□□□ -1.33
FN1-223ENST00000490833 LNX1Q8TBB1 728 aaPredicted RBP6.77□□□□□ -1.33
FN1-223ENST00000490833 ZNF564Q8TBZ8 553 aaPredicted RBP6.77□□□□□ -1.33
FN1-223ENST00000490833 MAGOHBQ96A72 148 aaKnown RBP6.77□□□□□ -1.33
FN1-223ENST00000490833 ATG4CQ96DT6 458 aa6.77□□□□□ -1.33
FN1-223ENST00000490833 MS4A14Q96JA4 679 aa6.77□□□□□ -1.33
FN1-223ENST00000490833 PSMB7Q99436 277 aa6.77□□□□□ -1.33
FN1-223ENST00000490833 CBWD1Q9BRT8 395 aa6.77□□□□□ -1.33
FN1-223ENST00000490833 PAGR1Q9BTK6 254 aa6.77□□□□□ -1.33
FN1-223ENST00000490833 PACSIN1Q9BY11 444 aa6.77□□□□□ -1.33
FN1-223ENST00000490833 NFKBIZQ9BYH8 718 aa6.77□□□□□ -1.33
FN1-223ENST00000490833 GPR88Q9GZN0 384 aa6.77□□□□□ -1.33
FN1-223ENST00000490833 THAP2Q9H0W7 228 aa6.77□□□□□ -1.33
FN1-223ENST00000490833 EPN3Q9H201 632 aa6.77□□□□□ -1.33
FN1-223ENST00000490833 PABPC3Q9H361 631 aaKnown RBP6.77□□□□□ -1.33
FN1-223ENST00000490833 SMARCAD1Q9H4L7 1026 aa6.77□□□□□ -1.33
FN1-223ENST00000490833 PCIF1Q9H4Z3 704 aa6.77□□□□□ -1.33
FN1-223ENST00000490833 TMBIM4Q9HC24 238 aa6.77□□□□□ -1.33
FN1-223ENST00000490833 HOMER2Q9NSB8 354 aa6.77□□□□□ -1.33
FN1-223ENST00000490833 GPRC5DQ9NZD1 345 aa6.77□□□□□ -1.33
FN1-223ENST00000490833 NOCTQ9UK39 431 aaKnown RBP6.77□□□□□ -1.33
FN1-223ENST00000490833 FCF1Q9Y324 198 aaKnown RBP6.77□□□□□ -1.33
FN1-223ENST00000490833 A0A087WUV0 522 aaPredicted RBP6.76□□□□□ -1.33
FN1-223ENST00000490833 A0A0B4J269 797 aa6.76□□□□□ -1.33
FN1-223ENST00000490833 AGPSO00116 658 aa6.76□□□□□ -1.33
FN1-223ENST00000490833 NOP56O00567 594 aaKnown RBP6.76□□□□□ -1.33
FN1-223ENST00000490833 DDX3YO15523 660 aaKnown RBP6.76□□□□□ -1.33
FN1-223ENST00000490833 NCK2O43639 380 aa6.76□□□□□ -1.33
FN1-223ENST00000490833 ADCY3O60266 1144 aa6.76□□□□□ -1.33
FN1-223ENST00000490833 MAFO75444 373 aaPredicted RBP6.76□□□□□ -1.33
FN1-223ENST00000490833 TJP3O95049 919 aa6.76□□□□□ -1.33
FN1-223ENST00000490833 CCNE2O96020 404 aa6.76□□□□□ -1.33
FN1-223ENST00000490833 TRIM49P0CI25 452 aa6.76□□□□□ -1.33
FN1-223ENST00000490833 TRIM49CP0CI26 452 aa6.76□□□□□ -1.33
FN1-223ENST00000490833 KRT5P13647 590 aa6.76□□□□□ -1.33
FN1-223ENST00000490833 EIF4BP23588 611 aaKnown RBP6.76□□□□□ -1.33
FN1-223ENST00000490833 EDNRBP24530 442 aa6.76□□□□□ -1.33
FN1-223ENST00000490833 TMOD1P28289 359 aa6.76□□□□□ -1.33
FN1-223ENST00000490833 ATICP31939 592 aa6.76□□□□□ -1.33
FN1-223ENST00000490833 PEX5P50542 639 aa6.76□□□□□ -1.33
FN1-223ENST00000490833 IRX3P78415 501 aaPredicted RBP6.76□□□□□ -1.33
FN1-223ENST00000490833 MAP2K1Q02750 393 aaPredicted RBP6.76□□□□□ -1.33
FN1-223ENST00000490833 DHX9Q08211 1270 aaKnown RBP6.76□□□□□ -1.33
FN1-223ENST00000490833 SLC20A2Q08357 652 aa6.76□□□□□ -1.33
FN1-223ENST00000490833 TRPC3Q13507 836 aa6.76□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms