RNA–Protein interactions for RNA: ENST00000490730.1

SYNE4-205, Transcript of spectrin repeat containing nuclear envelope family member 4, humanhuman

TSL 2

Gene SYNE4, Length 1,175 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4-205ENST00000490730 ITFG1Q8TB96 612 aa22.92■■□□□ 1.26
SYNE4-205ENST00000490730 GPR152Q8TDT2 470 aa22.92■■□□□ 1.26
SYNE4-205ENST00000490730 CALML4Q96GE6 196 aa22.92■■□□□ 1.26
SYNE4-205ENST00000490730 RTP3Q9BQQ7 232 aa22.92■■□□□ 1.26
SYNE4-205ENST00000490730 MYH15Q9Y2K3 1946 aa22.91■■□□□ 1.26
SYNE4-205ENST00000490730 CLDN3O15551 220 aa22.91■■□□□ 1.26
SYNE4-205ENST00000490730 UBA7P41226 1012 aa22.91■■□□□ 1.26
SYNE4-205ENST00000490730 PABPC1LQ4VXU2 614 aaKnown RBP22.91■■□□□ 1.26
SYNE4-205ENST00000490730 PARM1Q6UWI2 310 aa22.91■■□□□ 1.26
SYNE4-205ENST00000490730 GPBP1Q86WP2 473 aa22.91■■□□□ 1.26
SYNE4-205ENST00000490730 FGF13Q92913 245 aa22.91■■□□□ 1.26
SYNE4-205ENST00000490730 AK8Q96MA6 479 aa22.91■■□□□ 1.26
SYNE4-205ENST00000490730 LARSQ9P2J5 1176 aaKnown RBP22.91■■□□□ 1.26
SYNE4-205ENST00000490730 H0YCG3 227 aa22.9■■□□□ 1.26
SYNE4-205ENST00000490730 MEFVO15553 781 aaPredicted RBP22.9■■□□□ 1.26
SYNE4-205ENST00000490730 KRT18P05783 430 aaKnown RBP22.9■■□□□ 1.26
SYNE4-205ENST00000490730 ELF1P32519 619 aa22.9■■□□□ 1.26
SYNE4-205ENST00000490730 RPL9P32969 192 aaKnown RBP22.9■■□□□ 1.26
SYNE4-205ENST00000490730 MCM4P33991 863 aa22.9■■□□□ 1.26
SYNE4-205ENST00000490730 ROR1Q01973 937 aa22.9■■□□□ 1.26
SYNE4-205ENST00000490730 ARSHQ5FYA8 562 aa22.9■■□□□ 1.26
SYNE4-205ENST00000490730 ZPBP2Q6X784 338 aa22.9■■□□□ 1.26
SYNE4-205ENST00000490730 CCDC105Q8IYK2 499 aa22.9■■□□□ 1.26
SYNE4-205ENST00000490730 ING5Q8WYH8 240 aa22.9■■□□□ 1.26
SYNE4-205ENST00000490730 FGF14Q92915 247 aa22.9■■□□□ 1.26
SYNE4-205ENST00000490730 REEP2Q9BRK0 252 aa22.9■■□□□ 1.26
SYNE4-205ENST00000490730 RPP25Q9BUL9 199 aaKnown RBP22.9■■□□□ 1.26
SYNE4-205ENST00000490730 TBC1D17Q9HA65 648 aa22.9■■□□□ 1.26
SYNE4-205ENST00000490730 TUBGCP4Q9UGJ1 667 aa22.9■■□□□ 1.26
SYNE4-205ENST00000490730 MYO15AQ9UKN7 3530 aa22.9■■□□□ 1.26
SYNE4-205ENST00000490730 PRRG1O14668 218 aa22.89■■□□□ 1.25
SYNE4-205ENST00000490730 CXCL8P10145 99 aa22.89■■□□□ 1.25
SYNE4-205ENST00000490730 SPAG1Q07617 926 aa22.89■■□□□ 1.25
SYNE4-205ENST00000490730 SLC10A6Q3KNW5 377 aa22.89■■□□□ 1.25
SYNE4-205ENST00000490730 HAUS6Q7Z4H7 955 aa22.89■■□□□ 1.25
SYNE4-205ENST00000490730 DTWD2Q8NBA8 298 aa22.89■■□□□ 1.25
SYNE4-205ENST00000490730 TBC1D32Q96NH3 1257 aa22.89■■□□□ 1.25
SYNE4-205ENST00000490730 ZHX3Q9H4I2 956 aa22.89■■□□□ 1.25
SYNE4-205ENST00000490730 ARHGEF3Q9NR81 526 aa22.89■■□□□ 1.25
SYNE4-205ENST00000490730 DNMT3BQ9UBC3 853 aaKnown RBP22.89■■□□□ 1.25
SYNE4-205ENST00000490730 VPS37CA5D8V6 355 aaPredicted RBP22.88■■□□□ 1.25
SYNE4-205ENST00000490730 H7C4K7 107 aa22.88■■□□□ 1.25
SYNE4-205ENST00000490730 K7ENM7 598 aa22.88■■□□□ 1.25
SYNE4-205ENST00000490730 SYN3O14994 580 aa22.88■■□□□ 1.25
SYNE4-205ENST00000490730 FAM13AO94988 1023 aa22.88■■□□□ 1.25
SYNE4-205ENST00000490730 LRG1P02750 347 aa22.88■■□□□ 1.25
SYNE4-205ENST00000490730 POU2F2P09086 479 aa22.88■■□□□ 1.25
SYNE4-205ENST00000490730 LIG4P49917 911 aa22.88■■□□□ 1.25
SYNE4-205ENST00000490730 NCKAP1LP55160 1127 aa22.88■■□□□ 1.25
SYNE4-205ENST00000490730 MCL1Q07820 350 aa22.88■■□□□ 1.25
SYNE4-205ENST00000490730 CTXN3Q4LDR2 81 aa22.88■■□□□ 1.25
SYNE4-205ENST00000490730 SLC8B1Q6J4K2 584 aa22.88■■□□□ 1.25
SYNE4-205ENST00000490730 MTSS1LQ765P7 747 aa22.88■■□□□ 1.25
SYNE4-205ENST00000490730 BRAPQ7Z569 592 aa22.88■■□□□ 1.25
SYNE4-205ENST00000490730 MYCT1Q8N699 235 aa22.88■■□□□ 1.25
SYNE4-205ENST00000490730 ZNF461Q8TAF7 563 aa22.88■■□□□ 1.25
SYNE4-205ENST00000490730 ODF2LQ9ULJ1 636 aa22.88■■□□□ 1.25
SYNE4-205ENST00000490730 MRPS23Q9Y3D9 190 aaKnown RBP22.88■■□□□ 1.25
SYNE4-205ENST00000490730 WDR27A2RRH5 827 aa22.87■■□□□ 1.25
SYNE4-205ENST00000490730 HNRNPDLO14979 420 aaKnown RBP22.87■■□□□ 1.25
SYNE4-205ENST00000490730 BMP15O95972 392 aa22.87■■□□□ 1.25
SYNE4-205ENST00000490730 PLCG1P19174 1290 aa22.87■■□□□ 1.25
SYNE4-205ENST00000490730 KARSQ15046 597 aaKnown RBP22.87■■□□□ 1.25
SYNE4-205ENST00000490730 SPECC1Q5M775 1068 aa22.87■■□□□ 1.25
SYNE4-205ENST00000490730 RTL10Q7L3V2 364 aa22.87■■□□□ 1.25
SYNE4-205ENST00000490730 FRMD5Q7Z6J6 570 aa22.87■■□□□ 1.25
SYNE4-205ENST00000490730 TMEM130Q8N3G9 435 aa22.87■■□□□ 1.25
SYNE4-205ENST00000490730 KXD1Q9BQD3 176 aa22.87■■□□□ 1.25
SYNE4-205ENST00000490730 HAPLN2Q9GZV7 340 aa22.87■■□□□ 1.25
SYNE4-205ENST00000490730 CYP4F11Q9HBI6 524 aa22.87■■□□□ 1.25
SYNE4-205ENST00000490730 SLC2A4RGQ9NR83 387 aa22.87■■□□□ 1.25
SYNE4-205ENST00000490730 FBXL5Q9UKA1 691 aa22.87■■□□□ 1.25
SYNE4-205ENST00000490730 NOTCH4Q99466 2003 aa22.87■■□□□ 1.25
SYNE4-205ENST00000490730 SLC26A4O43511 780 aa22.86■■□□□ 1.25
SYNE4-205ENST00000490730 RHOP08100 348 aa22.86■■□□□ 1.25
SYNE4-205ENST00000490730 CLTAP09496 248 aa22.86■■□□□ 1.25
SYNE4-205ENST00000490730 TNFSF9P41273 254 aa22.86■■□□□ 1.25
SYNE4-205ENST00000490730 GPC5P78333 572 aa22.86■■□□□ 1.25
SYNE4-205ENST00000490730 GRIN1Q05586 938 aa22.86■■□□□ 1.25
SYNE4-205ENST00000490730 PPP2R3AQ06190 1150 aa22.86■■□□□ 1.25
SYNE4-205ENST00000490730 MCM6Q14566 821 aa22.86■■□□□ 1.25
SYNE4-205ENST00000490730 ANGPT1Q15389 498 aa22.86■■□□□ 1.25
SYNE4-205ENST00000490730 SF3A1Q15459 793 aaKnown RBP22.86■■□□□ 1.25
SYNE4-205ENST00000490730 ZNF280DQ6N043 979 aa22.86■■□□□ 1.25
SYNE4-205ENST00000490730 NPAS3Q8IXF0 933 aa22.86■■□□□ 1.25
SYNE4-205ENST00000490730 APPL2Q8NEU8 664 aa22.86■■□□□ 1.25
SYNE4-205ENST00000490730 LRRC15Q8TF66 581 aa22.86■■□□□ 1.25
SYNE4-205ENST00000490730 KIF12Q96FN5 646 aa22.86■■□□□ 1.25
SYNE4-205ENST00000490730 SUSD3Q96L08 255 aa22.86■■□□□ 1.25
SYNE4-205ENST00000490730 KCNH3Q9ULD8 1083 aa22.86■■□□□ 1.25
SYNE4-205ENST00000490730 TBCAO75347 108 aaKnown RBP22.85■■□□□ 1.25
SYNE4-205ENST00000490730 ABLIM3O94929 683 aa22.85■■□□□ 1.25
SYNE4-205ENST00000490730 MARCKSP29966 332 aaPredicted RBP22.85■■□□□ 1.25
SYNE4-205ENST00000490730 LONP1P36776 959 aaKnown RBP22.85■■□□□ 1.25
SYNE4-205ENST00000490730 NBL1P41271 181 aa22.85■■□□□ 1.25
SYNE4-205ENST00000490730 RAD54LQ92698 747 aa22.85■■□□□ 1.25
SYNE4-205ENST00000490730 DDX12PQ92771 950 aa22.85■■□□□ 1.25
SYNE4-205ENST00000490730 MCRS1Q96EZ8 462 aa22.85■■□□□ 1.25
SYNE4-205ENST00000490730 CORO1BQ9BR76 489 aa22.85■■□□□ 1.25
SYNE4-205ENST00000490730 PLEKHA5Q9HAU0 1116 aa22.85■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms