RNA–Protein interactions for RNA: ENST00000490346.1

ECM1-205, Transcript of extracellular matrix protein 1, humanhuman

TSL 3

Gene ECM1, Length 502 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECM1-205ENST00000490346 C12orf56Q8IXR9 622 aa9.96□□□□□ -0.82
ECM1-205ENST00000490346 EFCAB13Q8IY85 973 aa9.96□□□□□ -0.82
ECM1-205ENST00000490346 GUF1Q8N442 669 aaKnown RBP9.96□□□□□ -0.82
ECM1-205ENST00000490346 XXYLT1Q8NBI6 393 aa9.96□□□□□ -0.82
ECM1-205ENST00000490346 RDH13Q8NBN7 331 aa9.96□□□□□ -0.82
ECM1-205ENST00000490346 SPATA20Q8TB22 786 aa9.96□□□□□ -0.82
ECM1-205ENST00000490346 GOLGA5Q8TBA6 731 aa9.96□□□□□ -0.82
ECM1-205ENST00000490346 PPP2R3CQ969Q6 453 aa9.96□□□□□ -0.82
ECM1-205ENST00000490346 FAM84AQ96KN4 292 aa9.96□□□□□ -0.82
ECM1-205ENST00000490346 FBXL18Q96ME1 805 aa9.96□□□□□ -0.82
ECM1-205ENST00000490346 TSPAN18Q96SJ8 248 aa9.96□□□□□ -0.82
ECM1-205ENST00000490346 ASB7Q9H672 318 aa9.96□□□□□ -0.82
ECM1-205ENST00000490346 KIAA1586Q9HCI6 787 aa9.96□□□□□ -0.82
ECM1-205ENST00000490346 PDE11AQ9HCR9 933 aa9.96□□□□□ -0.82
ECM1-205ENST00000490346 LMBRD1Q9NUN5 540 aa9.96□□□□□ -0.82
ECM1-205ENST00000490346 CGNQ9P2M7 1197 aaKnown RBP9.96□□□□□ -0.82
ECM1-205ENST00000490346 STK39Q9UEW8 545 aa9.96□□□□□ -0.82
ECM1-205ENST00000490346 MAN1B1Q9UKM7 699 aa9.96□□□□□ -0.82
ECM1-205ENST00000490346 DERAQ9Y315 318 aa9.96□□□□□ -0.82
ECM1-205ENST00000490346 C2CD2Q9Y426 696 aa9.96□□□□□ -0.82
ECM1-205ENST00000490346 SF3B1O75533 1304 aaKnown RBP eCLIP9.96□□□□□ -0.82
ECM1-205ENST00000490346 ZNF233A6NK53 670 aa9.95□□□□□ -0.82
ECM1-205ENST00000490346 PDXKO00764 312 aa9.95□□□□□ -0.82
ECM1-205ENST00000490346 PPEF2O14830 753 aa9.95□□□□□ -0.82
ECM1-205ENST00000490346 LINC01565O15544 149 aa9.95□□□□□ -0.82
ECM1-205ENST00000490346 EXOC3O60645 756 aa9.95□□□□□ -0.82
ECM1-205ENST00000490346 NR3C1P04150 777 aa9.95□□□□□ -0.82
ECM1-205ENST00000490346 CYP3A5P20815 502 aa9.95□□□□□ -0.82
ECM1-205ENST00000490346 LRPAP1P30533 357 aa9.95□□□□□ -0.82
ECM1-205ENST00000490346 PRCPP42785 496 aa9.95□□□□□ -0.82
ECM1-205ENST00000490346 BRCC3P46736 316 aa9.95□□□□□ -0.82
ECM1-205ENST00000490346 GLUD2P49448 558 aa9.95□□□□□ -0.82
ECM1-205ENST00000490346 RBM10P98175 930 aaKnown RBP9.95□□□□□ -0.82
ECM1-205ENST00000490346 TFAMQ00059 246 aaKnown RBP9.95□□□□□ -0.82
ECM1-205ENST00000490346 DSG1Q02413 1049 aa9.95□□□□□ -0.82
ECM1-205ENST00000490346 SNRNP35Q16560 246 aaKnown RBP9.95□□□□□ -0.82
ECM1-205ENST00000490346 DUSP6Q16828 381 aa9.95□□□□□ -0.82
ECM1-205ENST00000490346 USP41Q3LFD5 358 aa9.95□□□□□ -0.82
ECM1-205ENST00000490346 RTP2Q5QGT7 225 aa9.95□□□□□ -0.82
ECM1-205ENST00000490346 ZNF658Q5TYW1 1059 aaPredicted RBP9.95□□□□□ -0.82
ECM1-205ENST00000490346 SPATA1Q5VX52 437 aa9.95□□□□□ -0.82
ECM1-205ENST00000490346 KIAA1841Q6NSI8 718 aa9.95□□□□□ -0.82
ECM1-205ENST00000490346 CEP57Q86XR8 500 aa9.95□□□□□ -0.82
ECM1-205ENST00000490346 BEST2Q8NFU1 509 aa9.95□□□□□ -0.82
ECM1-205ENST00000490346 RIN2Q8WYP3 895 aaPredicted RBP9.95□□□□□ -0.82
ECM1-205ENST00000490346 HLA-CQ95604 372 aa9.95□□□□□ -0.82
ECM1-205ENST00000490346 PABPC5Q96DU9 382 aaKnown RBP9.95□□□□□ -0.82
ECM1-205ENST00000490346 MRPL17Q9NRX2 175 aaKnown RBP9.95□□□□□ -0.82
ECM1-205ENST00000490346 CHST7Q9NS84 486 aa9.95□□□□□ -0.82
ECM1-205ENST00000490346 CLDND1Q9NY35 253 aa9.95□□□□□ -0.82
ECM1-205ENST00000490346 NUB1Q9Y5A7 615 aa9.95□□□□□ -0.82
ECM1-205ENST00000490346 GTF3C5Q9Y5Q8 519 aaPredicted RBP9.95□□□□□ -0.82
ECM1-205ENST00000490346 IRAK3Q9Y616 596 aa9.95□□□□□ -0.82
ECM1-205ENST00000490346 PTPRJQ12913 1337 aa9.94□□□□□ -0.82
ECM1-205ENST00000490346 GOLGA6L22H0YM25 854 aa9.94□□□□□ -0.82
ECM1-205ENST00000490346 BIN1O00499 593 aa9.94□□□□□ -0.82
ECM1-205ENST00000490346 NCK2O43639 380 aa9.94□□□□□ -0.82
ECM1-205ENST00000490346 CALUO43852 315 aaPredicted RBP9.94□□□□□ -0.82
ECM1-205ENST00000490346 LILRB3O75022 631 aa9.94□□□□□ -0.82
ECM1-205ENST00000490346 CNPP09543 421 aaKnown RBP9.94□□□□□ -0.82
ECM1-205ENST00000490346 KCNA5P22460 613 aa9.94□□□□□ -0.82
ECM1-205ENST00000490346 MCM4P33991 863 aa9.94□□□□□ -0.82
ECM1-205ENST00000490346 TFF2Q03403 129 aa9.94□□□□□ -0.82
ECM1-205ENST00000490346 CYP24A1Q07973 514 aa9.94□□□□□ -0.82
ECM1-205ENST00000490346 ELAVL2Q12926 359 aaKnown RBP9.94□□□□□ -0.82
ECM1-205ENST00000490346 COL19A1Q14993 1142 aa9.94□□□□□ -0.82
ECM1-205ENST00000490346 CTC1Q2NKJ3 1217 aa9.94□□□□□ -0.82
ECM1-205ENST00000490346 KIAA0319Q5VV43 1072 aa9.94□□□□□ -0.82
ECM1-205ENST00000490346 C9orf57Q5W0N0 161 aa9.94□□□□□ -0.82
ECM1-205ENST00000490346 LMBRD2Q68DH5 695 aaPredicted RBP9.94□□□□□ -0.82
ECM1-205ENST00000490346 LLGL2Q6P1M3 1020 aa9.94□□□□□ -0.82
ECM1-205ENST00000490346 PRSS55Q6UWB4 352 aaPredicted RBP9.94□□□□□ -0.82
ECM1-205ENST00000490346 NT5DC4Q86YG4 428 aa9.94□□□□□ -0.82
ECM1-205ENST00000490346 EFHBQ8N7U6 833 aa9.94□□□□□ -0.82
ECM1-205ENST00000490346 VN1R2Q8NFZ6 395 aa9.94□□□□□ -0.82
ECM1-205ENST00000490346 CCDC127Q96BQ5 260 aa9.94□□□□□ -0.82
ECM1-205ENST00000490346 CDCA3Q99618 268 aaPredicted RBP9.94□□□□□ -0.82
ECM1-205ENST00000490346 TTPALQ9BTX7 342 aa9.94□□□□□ -0.82
ECM1-205ENST00000490346 CLSTN2Q9H4D0 955 aa9.94□□□□□ -0.82
ECM1-205ENST00000490346 UBE2ZQ9H832 354 aaPredicted RBP9.94□□□□□ -0.82
ECM1-205ENST00000490346 DMAC2Q9NW81 257 aa9.94□□□□□ -0.82
ECM1-205ENST00000490346 DPP3Q9NY33 737 aa9.94□□□□□ -0.82
ECM1-205ENST00000490346 THEGQ9P2T0 379 aa9.94□□□□□ -0.82
ECM1-205ENST00000490346 TRAF3IP3Q9Y228 551 aa9.94□□□□□ -0.82
ECM1-205ENST00000490346 SSX2IPQ9Y2D8 614 aa9.94□□□□□ -0.82
ECM1-205ENST00000490346 BRWD1Q9NSI6 2320 aa9.94□□□□□ -0.82
ECM1-205ENST00000490346 VWA8A3KMH1 1905 aa9.94□□□□□ -0.82
ECM1-205ENST00000490346 ANO9A1A5B4 782 aa9.93□□□□□ -0.82
ECM1-205ENST00000490346 H3BQ06 376 aaPredicted RBP9.93□□□□□ -0.82
ECM1-205ENST00000490346 TRAPPC3O43617 180 aa9.93□□□□□ -0.82
ECM1-205ENST00000490346 CLASP2O75122 1294 aaKnown RBP9.93□□□□□ -0.82
ECM1-205ENST00000490346 TBX10O75333 385 aa9.93□□□□□ -0.82
ECM1-205ENST00000490346 GLP2RO95838 553 aa9.93□□□□□ -0.82
ECM1-205ENST00000490346 TMEM191BP0C7N4 346 aa9.93□□□□□ -0.82
ECM1-205ENST00000490346 DLATP10515 647 aaKnown RBP9.93□□□□□ -0.82
ECM1-205ENST00000490346 RPL17P18621 184 aaKnown RBP9.93□□□□□ -0.82
ECM1-205ENST00000490346 BMP6P22004 513 aa9.93□□□□□ -0.82
ECM1-205ENST00000490346 FGFR3P22607 806 aa9.93□□□□□ -0.82
ECM1-205ENST00000490346 NR2F2P24468 414 aa9.93□□□□□ -0.82
ECM1-205ENST00000490346 TKTP29401 623 aaKnown RBP9.93□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms