RNA–Protein interactions for RNA: ENST00000489614.5

NOD1-208, Transcript of nucleotide binding oligomerization domain containing 1, humanhuman

TSL 2

Gene NOD1, Length 3,098 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOD1-208ENST00000489614 CA12O43570 354 aa10.48□□□□□ -0.73
NOD1-208ENST00000489614 ZNF865P0CJ78 1059 aaPredicted RBP10.48□□□□□ -0.73
NOD1-208ENST00000489614 CCNFP41002 786 aa10.48□□□□□ -0.73
NOD1-208ENST00000489614 SERPINB4P48594 390 aa10.48□□□□□ -0.73
NOD1-208ENST00000489614 MAP2K5Q13163 448 aa10.48□□□□□ -0.73
NOD1-208ENST00000489614 CRHR2Q13324 411 aa10.48□□□□□ -0.73
NOD1-208ENST00000489614 LY6KQ17RY6 165 aa10.48□□□□□ -0.73
NOD1-208ENST00000489614 CCDC38Q502W7 563 aa10.48□□□□□ -0.73
NOD1-208ENST00000489614 PADI6Q6TGC4 694 aa10.48□□□□□ -0.73
NOD1-208ENST00000489614 CYFIP1Q7L576 1253 aa10.48□□□□□ -0.73
NOD1-208ENST00000489614 ZNF720Q7Z2F6 126 aa10.48□□□□□ -0.73
NOD1-208ENST00000489614 FBXO16Q8IX29 292 aaPredicted RBP10.48□□□□□ -0.73
NOD1-208ENST00000489614 ARFGAP2Q8N6H7 521 aa10.48□□□□□ -0.73
NOD1-208ENST00000489614 SPIRE2Q8WWL2 714 aa10.48□□□□□ -0.73
NOD1-208ENST00000489614 KLHL29Q96CT2 875 aa10.48□□□□□ -0.73
NOD1-208ENST00000489614 DHRS1Q96LJ7 313 aa10.48□□□□□ -0.73
NOD1-208ENST00000489614 PDGFCQ9NRA1 345 aa10.48□□□□□ -0.73
NOD1-208ENST00000489614 DMAC2Q9NW81 257 aa10.48□□□□□ -0.73
NOD1-208ENST00000489614 UBAP1Q9NZ09 502 aa10.48□□□□□ -0.73
NOD1-208ENST00000489614 ADAM22Q9P0K1 906 aa10.48□□□□□ -0.73
NOD1-208ENST00000489614 NKX1-2Q9UD57 310 aaPredicted RBP10.48□□□□□ -0.73
NOD1-208ENST00000489614 PAIP2BQ9ULR5 123 aaKnown RBP10.48□□□□□ -0.73
NOD1-208ENST00000489614 TRIM33Q9UPN9 1127 aa10.48□□□□□ -0.73
NOD1-208ENST00000489614 GNEQ9Y223 722 aaKnown RBP10.48□□□□□ -0.73
NOD1-208ENST00000489614 TMEM98Q9Y2Y6 226 aa10.48□□□□□ -0.73
NOD1-208ENST00000489614 REXO2Q9Y3B8 237 aaKnown RBP10.48□□□□□ -0.73
NOD1-208ENST00000489614 HMGB1P1B2RPK0 211 aaPredicted RBP10.47□□□□□ -0.73
NOD1-208ENST00000489614 TGFB1I1O43294 461 aa10.47□□□□□ -0.73
NOD1-208ENST00000489614 HIP1RO75146 1068 aa10.47□□□□□ -0.73
NOD1-208ENST00000489614 GHRP10912 638 aa10.47□□□□□ -0.73
NOD1-208ENST00000489614 ETS2P15036 469 aa10.47□□□□□ -0.73
NOD1-208ENST00000489614 KRT9P35527 623 aa10.47□□□□□ -0.73
NOD1-208ENST00000489614 ATP11AP98196 1134 aa10.47□□□□□ -0.73
NOD1-208ENST00000489614 ADCY1Q08828 1119 aa10.47□□□□□ -0.73
NOD1-208ENST00000489614 TRADDQ15628 312 aa10.47□□□□□ -0.73
NOD1-208ENST00000489614 NANOGNBQ7Z5D8 188 aa10.47□□□□□ -0.73
NOD1-208ENST00000489614 CNGA4Q8IV77 575 aa10.47□□□□□ -0.73
NOD1-208ENST00000489614 C12orf56Q8IXR9 622 aa10.47□□□□□ -0.73
NOD1-208ENST00000489614 ANKS4BQ8N8V4 417 aa10.47□□□□□ -0.73
NOD1-208ENST00000489614 SPATA4Q8NEY3 305 aa10.47□□□□□ -0.73
NOD1-208ENST00000489614 SMCR8Q8TEV9 937 aaPredicted RBP10.47□□□□□ -0.73
NOD1-208ENST00000489614 CDKN2AIPQ9NXV6 580 aaPredicted RBP10.47□□□□□ -0.73
NOD1-208ENST00000489614 CNOT8Q9UFF9 292 aaKnown RBP10.47□□□□□ -0.73
NOD1-208ENST00000489614 TUBGCP4Q9UGJ1 667 aa10.47□□□□□ -0.73
NOD1-208ENST00000489614 BICDL2A1A5D9 508 aa10.47□□□□□ -0.73
NOD1-208ENST00000489614 H0Y3Z8 333 aa10.47□□□□□ -0.73
NOD1-208ENST00000489614 MYBP10242 640 aa10.47□□□□□ -0.73
NOD1-208ENST00000489614 EEF1GP26641 437 aaKnown RBP10.47□□□□□ -0.73
NOD1-208ENST00000489614 RAD23BP54727 409 aa10.47□□□□□ -0.73
NOD1-208ENST00000489614 GTF2BQ00403 316 aa10.47□□□□□ -0.73
NOD1-208ENST00000489614 RNASELQ05823 741 aaKnown RBP10.47□□□□□ -0.73
NOD1-208ENST00000489614 KRT31Q15323 416 aa10.47□□□□□ -0.73
NOD1-208ENST00000489614 PAPD7Q5XG87 772 aaKnown RBP10.47□□□□□ -0.73
NOD1-208ENST00000489614 IQCEQ6IPM2 695 aa10.47□□□□□ -0.73
NOD1-208ENST00000489614 CYP26C1Q6V0L0 522 aa10.47□□□□□ -0.73
NOD1-208ENST00000489614 MPHOSPH6Q99547 160 aaKnown RBP10.47□□□□□ -0.73
NOD1-208ENST00000489614 ELAC2Q9BQ52 826 aaKnown RBP10.47□□□□□ -0.73
NOD1-208ENST00000489614 LBHD1Q9BQE6 289 aaPredicted RBP10.47□□□□□ -0.73
NOD1-208ENST00000489614 EPB41L5Q9HCM4 733 aa10.47□□□□□ -0.73
NOD1-208ENST00000489614 ABCF3Q9NUQ8 709 aa10.47□□□□□ -0.73
NOD1-208ENST00000489614 PKD2L1Q9P0L9 805 aa10.47□□□□□ -0.73
NOD1-208ENST00000489614 GABBR1Q9UBS5 961 aa10.47□□□□□ -0.73
NOD1-208ENST00000489614 CPA4Q9UI42 421 aa10.47□□□□□ -0.73
NOD1-208ENST00000489614 COL4A3BPQ9Y5P4 624 aa10.47□□□□□ -0.73
NOD1-208ENST00000489614 TMEM150BA6NC51 233 aa10.47□□□□□ -0.73
NOD1-208ENST00000489614 DCDC2CA8MYV0 355 aa10.47□□□□□ -0.73
NOD1-208ENST00000489614 PSMA7O14818 248 aa10.47□□□□□ -0.73
NOD1-208ENST00000489614 CETN3O15182 167 aa10.47□□□□□ -0.73
NOD1-208ENST00000489614 CEP104O60308 925 aa10.47□□□□□ -0.73
NOD1-208ENST00000489614 ARL2P36404 184 aa10.47□□□□□ -0.73
NOD1-208ENST00000489614 PRKCEQ02156 737 aa10.47□□□□□ -0.73
NOD1-208ENST00000489614 MKRN4PQ13434 485 aaPredicted RBP10.47□□□□□ -0.73
NOD1-208ENST00000489614 MYOCDQ8IZQ8 938 aa10.47□□□□□ -0.73
NOD1-208ENST00000489614 ATP6V0A1Q93050 837 aa10.47□□□□□ -0.73
NOD1-208ENST00000489614 CEP63Q96MT8 703 aa10.47□□□□□ -0.73
NOD1-208ENST00000489614 NOVA2Q9UNW9 492 aaKnown RBP10.47□□□□□ -0.73
NOD1-208ENST00000489614 DKC1O60832 514 aaKnown RBP eCLIP10.46□□□□□ -0.73
NOD1-208ENST00000489614 UBOX5O94941 541 aa10.46□□□□□ -0.73
NOD1-208ENST00000489614 NDUFA10O95299 355 aa10.46□□□□□ -0.73
NOD1-208ENST00000489614 MYZAPP0CAP1 466 aa10.46□□□□□ -0.73
NOD1-208ENST00000489614 PLS3P13797 630 aa10.46□□□□□ -0.73
NOD1-208ENST00000489614 CACNB1Q02641 598 aaPredicted RBP10.46□□□□□ -0.73
NOD1-208ENST00000489614 MCL1Q07820 350 aa10.46□□□□□ -0.73
NOD1-208ENST00000489614 HSDL1Q3SXM5 330 aa10.46□□□□□ -0.73
NOD1-208ENST00000489614 CCDC92Q53HC0 331 aaPredicted RBP10.46□□□□□ -0.73
NOD1-208ENST00000489614 XKR3Q5GH77 459 aa10.46□□□□□ -0.73
NOD1-208ENST00000489614 C8orf74Q6P047 294 aa10.46□□□□□ -0.73
NOD1-208ENST00000489614 SLC9A9Q8IVB4 645 aa10.46□□□□□ -0.73
NOD1-208ENST00000489614 PPTC7Q8NI37 304 aa10.46□□□□□ -0.73
NOD1-208ENST00000489614 BSNDQ8WZ55 320 aa10.46□□□□□ -0.73
NOD1-208ENST00000489614 TINF2Q9BSI4 451 aa10.46□□□□□ -0.73
NOD1-208ENST00000489614 TTYH3Q9C0H2 523 aa10.46□□□□□ -0.73
NOD1-208ENST00000489614 VCXQ9H320 206 aa10.46□□□□□ -0.73
NOD1-208ENST00000489614 ECT2Q9H8V3 914 aa10.46□□□□□ -0.73
NOD1-208ENST00000489614 C17orf75Q9HAS0 396 aa10.46□□□□□ -0.73
NOD1-208ENST00000489614 CYP26B1Q9NR63 512 aa10.46□□□□□ -0.73
NOD1-208ENST00000489614 ABHD10Q9NUJ1 306 aa10.46□□□□□ -0.73
NOD1-208ENST00000489614 TRIP12Q14669 1992 aaPredicted RBP10.46□□□□□ -0.74
NOD1-208ENST00000489614 PDXKO00764 312 aa10.46□□□□□ -0.74
NOD1-208ENST00000489614 NDUFB5O43674 189 aa10.46□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms