RNA–Protein interactions for RNA: ENST00000489324.1

FDPS-214, Transcript of farnesyl diphosphate synthase, humanhuman

TSL 2

Gene FDPS, Length 475 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FDPS-214ENST00000489324 TADA2AO75478 443 aa10.56□□□□□ -0.72
FDPS-214ENST00000489324 FGF18O76093 207 aa10.56□□□□□ -0.72
FDPS-214ENST00000489324 B3GAT3O94766 335 aa10.56□□□□□ -0.72
FDPS-214ENST00000489324 ARHGEF15O94989 841 aa10.56□□□□□ -0.72
FDPS-214ENST00000489324 NFICP08651 508 aa10.56□□□□□ -0.72
FDPS-214ENST00000489324 TNNI1P19237 187 aa10.56□□□□□ -0.72
FDPS-214ENST00000489324 POU3F3P20264 500 aaPredicted RBP10.56□□□□□ -0.72
FDPS-214ENST00000489324 CASP4P49662 377 aa10.56□□□□□ -0.72
FDPS-214ENST00000489324 FXR1P51114 621 aaKnown RBP eCLIP10.56□□□□□ -0.72
FDPS-214ENST00000489324 VAMP7P51809 220 aa10.56□□□□□ -0.72
FDPS-214ENST00000489324 MARSP56192 900 aaKnown RBP10.56□□□□□ -0.72
FDPS-214ENST00000489324 RBP5P82980 135 aa10.56□□□□□ -0.72
FDPS-214ENST00000489324 TFAMQ00059 246 aaKnown RBP10.56□□□□□ -0.72
FDPS-214ENST00000489324 TYRO3Q06418 890 aa10.56□□□□□ -0.72
FDPS-214ENST00000489324 BFSP1Q12934 665 aa10.56□□□□□ -0.72
FDPS-214ENST00000489324 GPM6BQ13491 265 aa10.56□□□□□ -0.72
FDPS-214ENST00000489324 TPD52L1Q16890 204 aaPredicted RBP10.56□□□□□ -0.72
FDPS-214ENST00000489324 EFCAB13Q8IY85 973 aa10.56□□□□□ -0.72
FDPS-214ENST00000489324 KLHL23Q8NBE8 558 aa10.56□□□□□ -0.72
FDPS-214ENST00000489324 ZSWIM2Q8NEG5 633 aa10.56□□□□□ -0.72
FDPS-214ENST00000489324 ARNTL2Q8WYA1 636 aa10.56□□□□□ -0.72
FDPS-214ENST00000489324 CCDC127Q96BQ5 260 aa10.56□□□□□ -0.72
FDPS-214ENST00000489324 BORCS6Q96GS4 357 aa10.56□□□□□ -0.72
FDPS-214ENST00000489324 LRCH3Q96II8 777 aa10.56□□□□□ -0.72
FDPS-214ENST00000489324 ZNF560Q96MR9 790 aa10.56□□□□□ -0.72
FDPS-214ENST00000489324 DUSP9Q99956 384 aaKnown RBP10.56□□□□□ -0.72
FDPS-214ENST00000489324 BPIFA3Q9BQP9 254 aa10.56□□□□□ -0.72
FDPS-214ENST00000489324 TTYH1Q9H313 450 aaPredicted RBP10.56□□□□□ -0.72
FDPS-214ENST00000489324 THAP9Q9H5L6 903 aa10.56□□□□□ -0.72
FDPS-214ENST00000489324 DPP3Q9NY33 737 aa10.56□□□□□ -0.72
FDPS-214ENST00000489324 DNAJB4Q9UDY4 337 aa10.56□□□□□ -0.72
FDPS-214ENST00000489324 ARMCX3Q9UH62 379 aaPredicted RBP10.56□□□□□ -0.72
FDPS-214ENST00000489324 ADAM28Q9UKQ2 775 aa10.56□□□□□ -0.72
FDPS-214ENST00000489324 SF3B1O75533 1304 aaKnown RBP eCLIP10.56□□□□□ -0.72
FDPS-214ENST00000489324 PTPRSQ13332 1948 aa10.55□□□□□ -0.72
FDPS-214ENST00000489324 ANO9A1A5B4 782 aa10.55□□□□□ -0.72
FDPS-214ENST00000489324 PIRO00625 290 aa10.55□□□□□ -0.72
FDPS-214ENST00000489324 PMM2O15305 246 aa10.55□□□□□ -0.72
FDPS-214ENST00000489324 ITGB1P05556 798 aa10.55□□□□□ -0.72
FDPS-214ENST00000489324 DLATP10515 647 aaKnown RBP10.55□□□□□ -0.72
FDPS-214ENST00000489324 CLCNKBP51801 687 aa10.55□□□□□ -0.72
FDPS-214ENST00000489324 STX17P56962 302 aa10.55□□□□□ -0.72
FDPS-214ENST00000489324 SOX4Q06945 474 aaPredicted RBP10.55□□□□□ -0.72
FDPS-214ENST00000489324 CCDC40Q4G0X9 1142 aa10.55□□□□□ -0.72
FDPS-214ENST00000489324 C9orf57Q5W0N0 161 aa10.55□□□□□ -0.72
FDPS-214ENST00000489324 FUT10Q6P4F1 479 aa10.55□□□□□ -0.72
FDPS-214ENST00000489324 PDXDC1Q6P996 788 aa10.55□□□□□ -0.72
FDPS-214ENST00000489324 RNF168Q8IYW5 571 aaPredicted RBP10.55□□□□□ -0.72
FDPS-214ENST00000489324 LRRC52Q8N7C0 313 aa10.55□□□□□ -0.72
FDPS-214ENST00000489324 SPPL3Q8TCT6 385 aa10.55□□□□□ -0.72
FDPS-214ENST00000489324 PPP2R3CQ969Q6 453 aa10.55□□□□□ -0.72
FDPS-214ENST00000489324 C18orf25Q96B23 403 aaPredicted RBP10.55□□□□□ -0.72
FDPS-214ENST00000489324 SRRTQ9BXP5 876 aaKnown RBP10.55□□□□□ -0.72
FDPS-214ENST00000489324 CXCL16Q9H2A7 254 aa10.55□□□□□ -0.72
FDPS-214ENST00000489324 NGRNQ9NPE2 291 aaKnown RBP10.55□□□□□ -0.72
FDPS-214ENST00000489324 MARCH5Q9NX47 278 aa10.55□□□□□ -0.72
FDPS-214ENST00000489324 TUBGCP4Q9UGJ1 667 aa10.55□□□□□ -0.72
FDPS-214ENST00000489324 PRG3Q9Y2Y8 225 aaPredicted RBP10.55□□□□□ -0.72
FDPS-214ENST00000489324 NUB1Q9Y5A7 615 aa10.55□□□□□ -0.72
FDPS-214ENST00000489324 FNDC1Q4ZHG4 1894 aaPredicted RBP10.55□□□□□ -0.72
FDPS-214ENST00000489324 SYCE3A1L190 88 aa10.54□□□□□ -0.72
FDPS-214ENST00000489324 FSD2A1L4K1 749 aa10.54□□□□□ -0.72
FDPS-214ENST00000489324 LRRIQ3A6PVS8 624 aaPredicted RBP10.54□□□□□ -0.72
FDPS-214ENST00000489324 SMTNL1A8MU46 457 aa10.54□□□□□ -0.72
FDPS-214ENST00000489324 SYN3O14994 580 aa10.54□□□□□ -0.72
FDPS-214ENST00000489324 P4HA2O15460 535 aa10.54□□□□□ -0.72
FDPS-214ENST00000489324 B4GALT3O60512 393 aa10.54□□□□□ -0.72
FDPS-214ENST00000489324 N4BP1O75113 896 aaKnown RBP10.54□□□□□ -0.72
FDPS-214ENST00000489324 STAU1O95793 577 aaKnown RBP10.54□□□□□ -0.72
FDPS-214ENST00000489324 EFEMP2O95967 443 aa10.54□□□□□ -0.72
FDPS-214ENST00000489324 SOD2P04179 222 aa10.54□□□□□ -0.72
FDPS-214ENST00000489324 FAM163BP0C2L3 166 aa10.54□□□□□ -0.72
FDPS-214ENST00000489324 ATICP31939 592 aa10.54□□□□□ -0.72
FDPS-214ENST00000489324 AARSP49588 968 aaKnown RBP eCLIP10.54□□□□□ -0.72
FDPS-214ENST00000489324 TAF6P49848 677 aa10.54□□□□□ -0.72
FDPS-214ENST00000489324 MYL5Q02045 173 aa10.54□□□□□ -0.72
FDPS-214ENST00000489324 CREMQ03060 361 aa10.54□□□□□ -0.72
FDPS-214ENST00000489324 SPAG1Q07617 926 aa10.54□□□□□ -0.72
FDPS-214ENST00000489324 CETN1Q12798 172 aa10.54□□□□□ -0.72
FDPS-214ENST00000489324 MYO1EQ12965 1108 aa10.54□□□□□ -0.72
FDPS-214ENST00000489324 TRPC3Q13507 836 aa10.54□□□□□ -0.72
FDPS-214ENST00000489324 USP41Q3LFD5 358 aa10.54□□□□□ -0.72
FDPS-214ENST00000489324 ZSCAN23Q3MJ62 389 aa10.54□□□□□ -0.72
FDPS-214ENST00000489324 PDZRN4Q6ZMN7 1036 aaPredicted RBP10.54□□□□□ -0.72
FDPS-214ENST00000489324 TRAPPC11Q7Z392 1133 aa10.54□□□□□ -0.72
FDPS-214ENST00000489324 C1orf127Q8N9H9 656 aa10.54□□□□□ -0.72
FDPS-214ENST00000489324 SPATA18Q8TC71 538 aa10.54□□□□□ -0.72
FDPS-214ENST00000489324 POF1BQ8WVV4 589 aa10.54□□□□□ -0.72
FDPS-214ENST00000489324 TAF4BQ92750 862 aa10.54□□□□□ -0.72
FDPS-214ENST00000489324 FAXDC2Q96IV6 333 aa10.54□□□□□ -0.72
FDPS-214ENST00000489324 SUSD3Q96L08 255 aa10.54□□□□□ -0.72
FDPS-214ENST00000489324 GAS2L1Q99501 681 aaPredicted RBP10.54□□□□□ -0.72
FDPS-214ENST00000489324 FUCA2Q9BTY2 467 aa10.54□□□□□ -0.72
FDPS-214ENST00000489324 HERC2P3Q9BVR0 1158 aa10.54□□□□□ -0.72
FDPS-214ENST00000489324 OXCT2Q9BYC2 517 aaPredicted RBP10.54□□□□□ -0.72
FDPS-214ENST00000489324 MTMR12Q9C0I1 747 aa10.54□□□□□ -0.72
FDPS-214ENST00000489324 TMEM8AQ9HCN3 771 aa10.54□□□□□ -0.72
FDPS-214ENST00000489324 TLR9Q9NR96 1032 aa10.54□□□□□ -0.72
FDPS-214ENST00000489324 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP10.54□□□□□ -0.723e-17■■□□□ 13.1
FDPS-214ENST00000489324 MAGEC2Q9UBF1 373 aaPredicted RBP10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms