RNA–Protein interactions for RNA: ENST00000489247.1

ATG4A-208, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 2

Gene ATG4A, Length 623 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-208ENST00000489247 FKBP15Q5T1M5 1219 aa6.08□□□□□ -1.44
ATG4A-208ENST00000489247 RASIP1Q5U651 963 aa6.08□□□□□ -1.44
ATG4A-208ENST00000489247 SNRNP48Q6IEG0 339 aaKnown RBP6.08□□□□□ -1.44
ATG4A-208ENST00000489247 DPY19L2P1Q6NXN4 242 aa6.08□□□□□ -1.44
ATG4A-208ENST00000489247 FDX2Q6P4F2 183 aa6.08□□□□□ -1.44
ATG4A-208ENST00000489247 WDR59Q6PJI9 974 aa6.08□□□□□ -1.44
ATG4A-208ENST00000489247 STXBP4Q6ZWJ1 553 aa6.08□□□□□ -1.44
ATG4A-208ENST00000489247 ZNF720Q7Z2F6 126 aa6.08□□□□□ -1.44
ATG4A-208ENST00000489247 MIER3Q7Z3K6 550 aa6.08□□□□□ -1.44
ATG4A-208ENST00000489247 PDZD3Q86UT5 571 aa6.08□□□□□ -1.44
ATG4A-208ENST00000489247 NLRX1Q86UT6 975 aa6.08□□□□□ -1.44
ATG4A-208ENST00000489247 SFR1Q86XK3 245 aa6.08□□□□□ -1.44
ATG4A-208ENST00000489247 ERO1BQ86YB8 467 aa6.08□□□□□ -1.44
ATG4A-208ENST00000489247 RELL1Q8IUW5 271 aa6.08□□□□□ -1.44
ATG4A-208ENST00000489247 SULF2Q8IWU5 870 aa6.08□□□□□ -1.44
ATG4A-208ENST00000489247 CCDC170Q8IYT3 715 aa6.08□□□□□ -1.44
ATG4A-208ENST00000489247 ANKRD13AQ8IZ07 590 aa6.08□□□□□ -1.44
ATG4A-208ENST00000489247 CPXCR1Q8N123 301 aa6.08□□□□□ -1.44
ATG4A-208ENST00000489247 C12orf50Q8NA57 414 aaPredicted RBP6.08□□□□□ -1.44
ATG4A-208ENST00000489247 SMG8Q8ND04 991 aaKnown RBP6.08□□□□□ -1.44
ATG4A-208ENST00000489247 KIF18AQ8NI77 898 aa6.08□□□□□ -1.44
ATG4A-208ENST00000489247 GOLGA5Q8TBA6 731 aa6.08□□□□□ -1.44
ATG4A-208ENST00000489247 DCPSQ96C86 337 aaKnown RBP6.08□□□□□ -1.44
ATG4A-208ENST00000489247 C16orf45Q96MC5 204 aaPredicted RBP6.08□□□□□ -1.44
ATG4A-208ENST00000489247 TINF2Q9BSI4 451 aa6.08□□□□□ -1.44
ATG4A-208ENST00000489247 CEP41Q9BYV8 373 aa6.08□□□□□ -1.44
ATG4A-208ENST00000489247 CEP44Q9C0F1 390 aa6.08□□□□□ -1.44
ATG4A-208ENST00000489247 PARVGQ9HBI0 331 aa6.08□□□□□ -1.44
ATG4A-208ENST00000489247 METTL14Q9HCE5 456 aaKnown RBP6.08□□□□□ -1.44
ATG4A-208ENST00000489247 A1CFQ9NQ94 594 aaKnown RBP6.08□□□□□ -1.44
ATG4A-208ENST00000489247 MYO1AQ9UBC5 1043 aa6.08□□□□□ -1.44
ATG4A-208ENST00000489247 FBXL5Q9UKA1 691 aa6.08□□□□□ -1.44
ATG4A-208ENST00000489247 MYO6Q9UM54 1294 aa6.08□□□□□ -1.44
ATG4A-208ENST00000489247 PLAGL2Q9UPG8 496 aa6.08□□□□□ -1.44
ATG4A-208ENST00000489247 LUC7L2Q9Y383 392 aaKnown RBP6.08□□□□□ -1.44
ATG4A-208ENST00000489247 DAAM1Q9Y4D1 1078 aa6.08□□□□□ -1.44
ATG4A-208ENST00000489247 CTDP1Q9Y5B0 961 aaPredicted RBP6.08□□□□□ -1.44
ATG4A-208ENST00000489247 CSADQ9Y600 493 aa6.08□□□□□ -1.44
ATG4A-208ENST00000489247 GOLGB1Q14789 3259 aaKnown RBP6.07□□□□□ -1.44
ATG4A-208ENST00000489247 ATP8B3O60423 1300 aa6.07□□□□□ -1.44
ATG4A-208ENST00000489247 PARP14Q460N5 1801 aa6.07□□□□□ -1.44
ATG4A-208ENST00000489247 UQCRHLA0A096LP55 91 aa6.07□□□□□ -1.44
ATG4A-208ENST00000489247 ARHGEF35A5YM69 484 aa6.07□□□□□ -1.44
ATG4A-208ENST00000489247 RSPH10B2B2RC85 870 aa6.07□□□□□ -1.44
ATG4A-208ENST00000489247 EIF3CLB5ME19 914 aaKnown RBP6.07□□□□□ -1.44
ATG4A-208ENST00000489247 ADM5C9JUS6 153 aa6.07□□□□□ -1.44
ATG4A-208ENST00000489247 NKRFO15226 690 aaKnown RBP eCLIP6.07□□□□□ -1.44
ATG4A-208ENST00000489247 MAPK13O15264 365 aa6.07□□□□□ -1.44
ATG4A-208ENST00000489247 PMM2O15305 246 aa6.07□□□□□ -1.44
ATG4A-208ENST00000489247 TGFB1I1O43294 461 aa6.07□□□□□ -1.44
ATG4A-208ENST00000489247 CALUO43852 315 aaPredicted RBP6.07□□□□□ -1.44
ATG4A-208ENST00000489247 STBD1O95210 358 aa6.07□□□□□ -1.44
ATG4A-208ENST00000489247 CCNE2O96020 404 aa6.07□□□□□ -1.44
ATG4A-208ENST00000489247 UQCRHP07919 91 aa6.07□□□□□ -1.44
ATG4A-208ENST00000489247 GSTP1P09211 210 aaKnown RBP6.07□□□□□ -1.44
ATG4A-208ENST00000489247 RSPH10BP0C881 870 aa6.07□□□□□ -1.44
ATG4A-208ENST00000489247 RPL13P26373 211 aaKnown RBP6.07□□□□□ -1.44
ATG4A-208ENST00000489247 ANXA13P27216 316 aa6.07□□□□□ -1.44
ATG4A-208ENST00000489247 ARHGAP25P42331 645 aa6.07□□□□□ -1.44
ATG4A-208ENST00000489247 LIG3P49916 1009 aa6.07□□□□□ -1.44
ATG4A-208ENST00000489247 CASP5P51878 434 aa6.07□□□□□ -1.44
ATG4A-208ENST00000489247 RTP1P59025 263 aa6.07□□□□□ -1.44
ATG4A-208ENST00000489247 PSMC5P62195 406 aa6.07□□□□□ -1.44
ATG4A-208ENST00000489247 UBXN2AP68543 259 aa6.07□□□□□ -1.44
ATG4A-208ENST00000489247 CYP4A11Q02928 519 aa6.07□□□□□ -1.44
ATG4A-208ENST00000489247 GOLGA8FQ08AF8 430 aa6.07□□□□□ -1.44
ATG4A-208ENST00000489247 GOLGA8DPQ0D2H9 430 aa6.07□□□□□ -1.44
ATG4A-208ENST00000489247 ADAM9Q13443 819 aa6.07□□□□□ -1.44
ATG4A-208ENST00000489247 PTPN21Q16825 1174 aa6.07□□□□□ -1.44
ATG4A-208ENST00000489247 GNPTABQ3T906 1256 aa6.07□□□□□ -1.44
ATG4A-208ENST00000489247 ARHGEF16Q5VV41 709 aa6.07□□□□□ -1.44
ATG4A-208ENST00000489247 PRAMEF18Q5VWM3 479 aa6.07□□□□□ -1.44
ATG4A-208ENST00000489247 ANKRD34AQ69YU3 496 aa6.07□□□□□ -1.44
ATG4A-208ENST00000489247 PRR23CQ6ZRP0 262 aa6.07□□□□□ -1.44
ATG4A-208ENST00000489247 TOGARAM2Q6ZUX3 1019 aa6.07□□□□□ -1.44
ATG4A-208ENST00000489247 TPH2Q8IWU9 490 aa6.07□□□□□ -1.44
ATG4A-208ENST00000489247 GRIN3AQ8TCU5 1115 aa6.07□□□□□ -1.44
ATG4A-208ENST00000489247 MORC4Q8TE76 937 aa6.07□□□□□ -1.44
ATG4A-208ENST00000489247 PIGOQ8TEQ8 1089 aa6.07□□□□□ -1.44
ATG4A-208ENST00000489247 UTP4Q969X6 686 aaKnown RBP6.07□□□□□ -1.44
ATG4A-208ENST00000489247 HVCN1Q96D96 273 aa6.07□□□□□ -1.44
ATG4A-208ENST00000489247 CDCA5Q96FF9 252 aa6.07□□□□□ -1.44
ATG4A-208ENST00000489247 EIF3CQ99613 913 aaKnown RBP6.07□□□□□ -1.44
ATG4A-208ENST00000489247 MOV10L1Q9BXT6 1211 aaKnown RBP6.07□□□□□ -1.44
ATG4A-208ENST00000489247 C17orf75Q9HAS0 396 aa6.07□□□□□ -1.44
ATG4A-208ENST00000489247 PLCB1Q9NQ66 1216 aa6.07□□□□□ -1.44
ATG4A-208ENST00000489247 TRMT1Q9NXH9 659 aaKnown RBP6.07□□□□□ -1.44
ATG4A-208ENST00000489247 TLR6Q9Y2C9 796 aa6.07□□□□□ -1.44
ATG4A-208ENST00000489247 SLC45A1Q9Y2W3 748 aa6.07□□□□□ -1.44
ATG4A-208ENST00000489247 EPN1Q9Y6I3 576 aaPredicted RBP6.07□□□□□ -1.44
ATG4A-208ENST00000489247 RBBP6Q7Z6E9 1792 aaKnown RBP6.07□□□□□ -1.44
ATG4A-208ENST00000489247 IGSF9BQ9UPX0 1349 aa6.06□□□□□ -1.44
ATG4A-208ENST00000489247 DNAJC25-GNG10A0A024R161 153 aa6.06□□□□□ -1.44
ATG4A-208ENST00000489247 IGKV6D-21A0A0A0MT36 114 aa6.06□□□□□ -1.44
ATG4A-208ENST00000489247 SSU72P8A0A1W2PR75 194 aa6.06□□□□□ -1.44
ATG4A-208ENST00000489247 IQCA1LA6NCM1 817 aa6.06□□□□□ -1.44
ATG4A-208ENST00000489247 GLTPD2A6NH11 291 aa6.06□□□□□ -1.44
ATG4A-208ENST00000489247 RBAK-RBAKDNI3L0D1 243 aa6.06□□□□□ -1.44
ATG4A-208ENST00000489247 TRAF5O00463 557 aa6.06□□□□□ -1.44
ATG4A-208ENST00000489247 FANCGO15287 622 aa6.06□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms