RNA–Protein interactions for RNA: ENST00000489212.2

LIME1-207, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

TSL 5

Gene LIME1, Length 559 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-207ENST00000489212 ADSSP30520 456 aa23.05■■□□□ 1.28
LIME1-207ENST00000489212 RPL9P32969 192 aaKnown RBP23.05■■□□□ 1.28
LIME1-207ENST00000489212 CREMQ03060 361 aa23.05■■□□□ 1.28
LIME1-207ENST00000489212 ZBTB6Q15916 424 aa23.05■■□□□ 1.28
LIME1-207ENST00000489212 KYAT1Q16773 422 aa23.05■■□□□ 1.28
LIME1-207ENST00000489212 RESP18Q5W5W9 173 aa23.05■■□□□ 1.28
LIME1-207ENST00000489212 GPR149Q86SP6 731 aa23.05■■□□□ 1.28
LIME1-207ENST00000489212 IQUBQ8NA54 791 aa23.05■■□□□ 1.28
LIME1-207ENST00000489212 KIF12Q96FN5 646 aa23.05■■□□□ 1.28
LIME1-207ENST00000489212 RIPOR3Q96MK2 946 aa23.05■■□□□ 1.28
LIME1-207ENST00000489212 TRIM9Q9C026 710 aa23.05■■□□□ 1.28
LIME1-207ENST00000489212 RPF1Q9H9Y2 349 aaKnown RBP23.05■■□□□ 1.28
LIME1-207ENST00000489212 MUTYHQ9UIF7 546 aa23.05■■□□□ 1.28
LIME1-207ENST00000489212 SPDYE4A6NLX3 237 aa23.04■■□□□ 1.28
LIME1-207ENST00000489212 POLR2DO15514 142 aaKnown RBP23.04■■□□□ 1.28
LIME1-207ENST00000489212 DCXO43602 365 aa23.04■■□□□ 1.28
LIME1-207ENST00000489212 RFPL2O75678 378 aa23.04■■□□□ 1.28
LIME1-207ENST00000489212 GCNT3O95395 438 aa23.04■■□□□ 1.28
LIME1-207ENST00000489212 C1RP00736 705 aa23.04■■□□□ 1.28
LIME1-207ENST00000489212 PPP2R3AQ06190 1150 aa23.04■■□□□ 1.28
LIME1-207ENST00000489212 ATAT1Q5SQI0 421 aa23.04■■□□□ 1.28
LIME1-207ENST00000489212 L1TD1Q5T7N2 865 aaKnown RBP23.04■■□□□ 1.28
LIME1-207ENST00000489212 ADALQ6DHV7 355 aa23.04■■□□□ 1.28
LIME1-207ENST00000489212 C1QTNF1Q9BXJ1 281 aa23.04■■□□□ 1.28
LIME1-207ENST00000489212 ANK1P16157 1881 aa23.04■■□□□ 1.28
LIME1-207ENST00000489212 DENND4AQ7Z401 1863 aa23.03■■□□□ 1.28
LIME1-207ENST00000489212 ACOT2P49753 483 aa23.03■■□□□ 1.28
LIME1-207ENST00000489212 GUCY2FP51841 1108 aa23.03■■□□□ 1.28
LIME1-207ENST00000489212 SLFN12LQ6IEE8 588 aa23.03■■□□□ 1.28
LIME1-207ENST00000489212 RSPO2Q6UXX9 243 aaPredicted RBP23.03■■□□□ 1.28
LIME1-207ENST00000489212 CCDC65Q8IXS2 484 aa23.03■■□□□ 1.28
LIME1-207ENST00000489212 GLIS3Q8NEA6 775 aa23.03■■□□□ 1.28
LIME1-207ENST00000489212 CMASQ8NFW8 434 aaPredicted RBP23.03■■□□□ 1.28
LIME1-207ENST00000489212 HPS3Q969F9 1004 aa23.03■■□□□ 1.28
LIME1-207ENST00000489212 ACCSQ96QU6 501 aa23.03■■□□□ 1.28
LIME1-207ENST00000489212 MTRRQ9UBK8 725 aa23.03■■□□□ 1.28
LIME1-207ENST00000489212 AGO2Q9UKV8 859 aaKnown RBP23.03■■□□□ 1.28
LIME1-207ENST00000489212 TCHHQ07283 1943 aa23.02■■□□□ 1.28
LIME1-207ENST00000489212 FAM86C2PA6NEL3 165 aa23.02■■□□□ 1.28
LIME1-207ENST00000489212 TRAPPC3O43617 180 aa23.02■■□□□ 1.28
LIME1-207ENST00000489212 ALADP13716 330 aa23.02■■□□□ 1.28
LIME1-207ENST00000489212 LRPAP1P30533 357 aa23.02■■□□□ 1.28
LIME1-207ENST00000489212 PDXDC1Q6P996 788 aa23.02■■□□□ 1.28
LIME1-207ENST00000489212 KREMEN2Q8NCW0 462 aa23.02■■□□□ 1.28
LIME1-207ENST00000489212 HDAC7Q8WUI4 952 aa23.02■■□□□ 1.28
LIME1-207ENST00000489212 LEO1Q8WVC0 666 aaPredicted RBP23.02■■□□□ 1.28
LIME1-207ENST00000489212 ZNF707Q96C28 371 aaPredicted RBP23.02■■□□□ 1.28
LIME1-207ENST00000489212 FAM212AQ96EL1 285 aa23.02■■□□□ 1.28
LIME1-207ENST00000489212 LRRC27Q9C0I9 530 aa23.02■■□□□ 1.28
LIME1-207ENST00000489212 PLEKHA4Q9H4M7 779 aa23.02■■□□□ 1.28
LIME1-207ENST00000489212 TSHZ2Q9NRE2 1034 aa23.02■■□□□ 1.28
LIME1-207ENST00000489212 FAM13BQ9NYF5 915 aa23.02■■□□□ 1.28
LIME1-207ENST00000489212 UBQLN1Q9UMX0 589 aaKnown RBP23.02■■□□□ 1.28
LIME1-207ENST00000489212 PCDHB13Q9Y5F0 798 aa23.02■■□□□ 1.28
LIME1-207ENST00000489212 CCDC195A0A1B0GUA6 201 aa23.01■■□□□ 1.27
LIME1-207ENST00000489212 C2CD4DB7Z1M9 353 aa23.01■■□□□ 1.27
LIME1-207ENST00000489212 PRPF6O94906 941 aaKnown RBP23.01■■□□□ 1.27
LIME1-207ENST00000489212 PAPLNO95428 1278 aa23.01■■□□□ 1.27
LIME1-207ENST00000489212 CYP3A5P20815 502 aa23.01■■□□□ 1.27
LIME1-207ENST00000489212 CASP1P29466 404 aa23.01■■□□□ 1.27
LIME1-207ENST00000489212 JADE1Q6IE81 842 aa23.01■■□□□ 1.27
LIME1-207ENST00000489212 CNNM4Q6P4Q7 775 aa23.01■■□□□ 1.27
LIME1-207ENST00000489212 CRELD2Q6UXH1 353 aaPredicted RBP23.01■■□□□ 1.27
LIME1-207ENST00000489212 C15orf39Q6ZRI6 1047 aa23.01■■□□□ 1.27
LIME1-207ENST00000489212 ZSWIM2Q8NEG5 633 aa23.01■■□□□ 1.27
LIME1-207ENST00000489212 POMGNT1Q8WZA1 660 aa23.01■■□□□ 1.27
LIME1-207ENST00000489212 C7orf25Q9BPX7 421 aa23.01■■□□□ 1.27
LIME1-207ENST00000489212 DPP7Q9UHL4 492 aa23.01■■□□□ 1.27
LIME1-207ENST00000489212 FBXW11Q9UKB1 542 aa23.01■■□□□ 1.27
LIME1-207ENST00000489212 EXOC7Q9UPT5 735 aa23.01■■□□□ 1.27
LIME1-207ENST00000489212 NUB1Q9Y5A7 615 aa23.01■■□□□ 1.27
LIME1-207ENST00000489212 NFICP08651 508 aa23■■□□□ 1.27
LIME1-207ENST00000489212 OR1D2P34982 312 aa23■■□□□ 1.27
LIME1-207ENST00000489212 ASIC1P78348 528 aa23■■□□□ 1.27
LIME1-207ENST00000489212 AMPD3Q01432 767 aa23■■□□□ 1.27
LIME1-207ENST00000489212 VARS2Q5ST30 1063 aaKnown RBP23■■□□□ 1.27
LIME1-207ENST00000489212 CD302Q8IX05 232 aa23■■□□□ 1.27
LIME1-207ENST00000489212 SUSD3Q96L08 255 aa23■■□□□ 1.27
LIME1-207ENST00000489212 MAGEF1Q9HAY2 307 aa23■■□□□ 1.27
LIME1-207ENST00000489212 KCNH3Q9ULD8 1083 aa23■■□□□ 1.27
LIME1-207ENST00000489212 NR2E1Q9Y466 385 aa23■■□□□ 1.27
LIME1-207ENST00000489212 BACE2Q9Y5Z0 518 aa23■■□□□ 1.27
LIME1-207ENST00000489212 CDY1Q9Y6F8 540 aa23■■□□□ 1.27
LIME1-207ENST00000489212 MYO10Q9HD67 2058 aa23■■□□□ 1.27
LIME1-207ENST00000489212 DOCK6Q96HP0 2047 aa22.99■■□□□ 1.27
LIME1-207ENST00000489212 TECTAO75443 2155 aa22.99■■□□□ 1.27
LIME1-207ENST00000489212 PPEF2O14830 753 aa22.99■■□□□ 1.27
LIME1-207ENST00000489212 GPR37L1O60883 481 aa22.99■■□□□ 1.27
LIME1-207ENST00000489212 MCM4P33991 863 aa22.99■■□□□ 1.27
LIME1-207ENST00000489212 KRT85P78386 507 aa22.99■■□□□ 1.27
LIME1-207ENST00000489212 ALCAMQ13740 583 aa22.99■■□□□ 1.27
LIME1-207ENST00000489212 RAB33AQ14088 237 aa22.99■■□□□ 1.27
LIME1-207ENST00000489212 POSTNQ15063 836 aa22.99■■□□□ 1.27
LIME1-207ENST00000489212 SPATA1Q5VX52 437 aa22.99■■□□□ 1.27
LIME1-207ENST00000489212 ELMSAN1Q6PJG2 1045 aa22.99■■□□□ 1.27
LIME1-207ENST00000489212 ANKS3Q6ZW76 656 aa22.99■■□□□ 1.27
LIME1-207ENST00000489212 TSPAN18Q96SJ8 248 aa22.99■■□□□ 1.27
LIME1-207ENST00000489212 LRFN3Q9BTN0 628 aa22.99■■□□□ 1.27
LIME1-207ENST00000489212 RHOBTB2Q9BYZ6 727 aa22.99■■□□□ 1.27
LIME1-207ENST00000489212 BLZF1Q9H2G9 400 aa22.99■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms