RNA–Protein interactions for RNA: ENST00000488920.2

CCHCR1-215, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 3

Gene CCHCR1, Length 715 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-215ENST00000488920 ARPP19P56211 112 aa13.02□□□□□ -0.33
CCHCR1-215ENST00000488920 VARS2Q5ST30 1063 aaKnown RBP13.02□□□□□ -0.33
CCHCR1-215ENST00000488920 ZBTB41Q5SVQ8 909 aa13.02□□□□□ -0.33
CCHCR1-215ENST00000488920 ALYREFQ86V81 257 aaKnown RBP13.02□□□□□ -0.33
CCHCR1-215ENST00000488920 LARP4BQ92615 738 aaKnown RBP13.02□□□□□ -0.33
CCHCR1-215ENST00000488920 INTS4Q96HW7 963 aaKnown RBP13.02□□□□□ -0.33
CCHCR1-215ENST00000488920 MFSD1Q9H3U5 465 aa13.02□□□□□ -0.33
CCHCR1-215ENST00000488920 PLEKHA5Q9HAU0 1116 aa13.02□□□□□ -0.33
CCHCR1-215ENST00000488920 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP13.02□□□□□ -0.33
CCHCR1-215ENST00000488920 IGSF9Q9P2J2 1179 aa13.02□□□□□ -0.33
CCHCR1-215ENST00000488920 TUBGCP4Q9UGJ1 667 aa13.02□□□□□ -0.33
CCHCR1-215ENST00000488920 MTMR6Q9Y217 621 aa13.02□□□□□ -0.33
CCHCR1-215ENST00000488920 SRPRBQ9Y5M8 271 aaKnown RBP13.02□□□□□ -0.33
CCHCR1-215ENST00000488920 MUC6Q6W4X9 2439 aa13.02□□□□□ -0.33
CCHCR1-215ENST00000488920 PLXNA3P51805 1871 aa13.02□□□□□ -0.33
CCHCR1-215ENST00000488920 TTC26A0AVF1 554 aa13.01□□□□□ -0.33
CCHCR1-215ENST00000488920 LACTBL1A8MY62 500 aa13.01□□□□□ -0.33
CCHCR1-215ENST00000488920 HNRNPDLO14979 420 aaKnown RBP13.01□□□□□ -0.33
CCHCR1-215ENST00000488920 XYLBO75191 536 aa13.01□□□□□ -0.33
CCHCR1-215ENST00000488920 UVSSAQ2YD98 709 aa13.01□□□□□ -0.33
CCHCR1-215ENST00000488920 ZC2HC1CQ53FD0 456 aaPredicted RBP13.01□□□□□ -0.33
CCHCR1-215ENST00000488920 RRAGBQ5VZM2 374 aa13.01□□□□□ -0.33
CCHCR1-215ENST00000488920 DYMQ7RTS9 669 aa13.01□□□□□ -0.33
CCHCR1-215ENST00000488920 SLC44A3Q8N4M1 653 aa13.01□□□□□ -0.33
CCHCR1-215ENST00000488920 KRI1Q8N9T8 703 aaKnown RBP13.01□□□□□ -0.33
CCHCR1-215ENST00000488920 KIF12Q96FN5 646 aa13.01□□□□□ -0.33
CCHCR1-215ENST00000488920 PANK2Q9BZ23 570 aa13.01□□□□□ -0.33
CCHCR1-215ENST00000488920 HCFC1R1Q9NWW0 138 aa13.01□□□□□ -0.33
CCHCR1-215ENST00000488920 CCDC39Q9UFE4 941 aa13.01□□□□□ -0.33
CCHCR1-215ENST00000488920 FBXL21Q9UKT6 434 aa13.01□□□□□ -0.33
CCHCR1-215ENST00000488920 DUSP12Q9UNI6 340 aa13.01□□□□□ -0.33
CCHCR1-215ENST00000488920 A0A0B4J269 797 aa13□□□□□ -0.33
CCHCR1-215ENST00000488920 ANKRD63C9JTQ0 380 aa13□□□□□ -0.33
CCHCR1-215ENST00000488920 K7ELQ4 463 aaPredicted RBP13□□□□□ -0.33
CCHCR1-215ENST00000488920 SYN3O14994 580 aa13□□□□□ -0.33
CCHCR1-215ENST00000488920 OGTO15294 1046 aa13□□□□□ -0.33
CCHCR1-215ENST00000488920 FAM189A1O60320 539 aa13□□□□□ -0.33
CCHCR1-215ENST00000488920 PIGRP01833 764 aa13□□□□□ -0.33
CCHCR1-215ENST00000488920 SCP2P22307 547 aa13□□□□□ -0.33
CCHCR1-215ENST00000488920 HOXA9P31269 272 aa13□□□□□ -0.33
CCHCR1-215ENST00000488920 MCM4P33991 863 aa13□□□□□ -0.33
CCHCR1-215ENST00000488920 GUCY2FP51841 1108 aa13□□□□□ -0.33
CCHCR1-215ENST00000488920 PTPN5P54829 565 aa13□□□□□ -0.33
CCHCR1-215ENST00000488920 GTF2BQ00403 316 aa13□□□□□ -0.33
CCHCR1-215ENST00000488920 TCF15Q12870 199 aa13□□□□□ -0.33
CCHCR1-215ENST00000488920 MRPL58Q14197 206 aaKnown RBP13□□□□□ -0.33
CCHCR1-215ENST00000488920 ZBTB6Q15916 424 aa13□□□□□ -0.33
CCHCR1-215ENST00000488920 ENOX2Q16206 610 aaKnown RBP13□□□□□ -0.33
CCHCR1-215ENST00000488920 SLC8B1Q6J4K2 584 aa13□□□□□ -0.33
CCHCR1-215ENST00000488920 SLC39A4Q6P5W5 647 aa13□□□□□ -0.33
CCHCR1-215ENST00000488920 TMEM105Q8N8V8 129 aa13□□□□□ -0.33
CCHCR1-215ENST00000488920 FLCNQ8NFG4 579 aa13□□□□□ -0.33
CCHCR1-215ENST00000488920 ZNF461Q8TAF7 563 aa13□□□□□ -0.33
CCHCR1-215ENST00000488920 ITFG1Q8TB96 612 aa13□□□□□ -0.33
CCHCR1-215ENST00000488920 KCNN1Q92952 543 aa13□□□□□ -0.33
CCHCR1-215ENST00000488920 FAM212AQ96EL1 285 aa13□□□□□ -0.33
CCHCR1-215ENST00000488920 SUSD3Q96L08 255 aa13□□□□□ -0.33
CCHCR1-215ENST00000488920 USP28Q96RU2 1077 aa13□□□□□ -0.33
CCHCR1-215ENST00000488920 FIZ1Q96SL8 496 aa13□□□□□ -0.33
CCHCR1-215ENST00000488920 PHOX2BQ99453 314 aa13□□□□□ -0.33
CCHCR1-215ENST00000488920 PRRX2Q99811 253 aa13□□□□□ -0.33
CCHCR1-215ENST00000488920 MSTO1Q9BUK6 570 aa13□□□□□ -0.33
CCHCR1-215ENST00000488920 RPF1Q9H9Y2 349 aaKnown RBP13□□□□□ -0.33
CCHCR1-215ENST00000488920 MYO10Q9HD67 2058 aa13□□□□□ -0.33
CCHCR1-215ENST00000488920 MYMKA6NI61 221 aa12.99□□□□□ -0.33
CCHCR1-215ENST00000488920 TISP43B9A030 160 aa12.99□□□□□ -0.33
CCHCR1-215ENST00000488920 ANHXE9PGG2 379 aa12.99□□□□□ -0.33
CCHCR1-215ENST00000488920 H7C4K7 107 aa12.99□□□□□ -0.33
CCHCR1-215ENST00000488920 PRRG1O14668 218 aa12.99□□□□□ -0.33
CCHCR1-215ENST00000488920 STX6O43752 255 aa12.99□□□□□ -0.33
CCHCR1-215ENST00000488920 TBC1D4O60343 1298 aa12.99□□□□□ -0.33
CCHCR1-215ENST00000488920 ABLIM3O94929 683 aa12.99□□□□□ -0.33
CCHCR1-215ENST00000488920 CFHP08603 1231 aa12.99□□□□□ -0.33
CCHCR1-215ENST00000488920 NPR3P17342 541 aa12.99□□□□□ -0.33
CCHCR1-215ENST00000488920 ELF1P32519 619 aa12.99□□□□□ -0.33
CCHCR1-215ENST00000488920 ROR1Q01973 937 aa12.99□□□□□ -0.33
CCHCR1-215ENST00000488920 PPP2R3AQ06190 1150 aa12.99□□□□□ -0.33
CCHCR1-215ENST00000488920 SLC39A14Q15043 492 aa12.99□□□□□ -0.33
CCHCR1-215ENST00000488920 KYAT1Q16773 422 aa12.99□□□□□ -0.33
CCHCR1-215ENST00000488920 CTXN3Q4LDR2 81 aa12.99□□□□□ -0.33
CCHCR1-215ENST00000488920 ASTLQ6HA08 431 aaPredicted RBP12.99□□□□□ -0.33
CCHCR1-215ENST00000488920 SIX5Q8N196 739 aa12.99□□□□□ -0.33
CCHCR1-215ENST00000488920 APPL2Q8NEU8 664 aa12.99□□□□□ -0.33
CCHCR1-215ENST00000488920 DDX12PQ92771 950 aa12.99□□□□□ -0.33
CCHCR1-215ENST00000488920 FGF13Q92913 245 aa12.99□□□□□ -0.33
CCHCR1-215ENST00000488920 NXPE3Q969Y0 559 aa12.99□□□□□ -0.33
CCHCR1-215ENST00000488920 RPP25Q9BUL9 199 aaKnown RBP12.99□□□□□ -0.33
CCHCR1-215ENST00000488920 IKZF4Q9H2S9 585 aa12.99□□□□□ -0.33
CCHCR1-215ENST00000488920 DNMT3BQ9UBC3 853 aaKnown RBP12.99□□□□□ -0.33
CCHCR1-215ENST00000488920 STK17AQ9UEE5 414 aa12.99□□□□□ -0.33
CCHCR1-215ENST00000488920 FBXL5Q9UKA1 691 aa12.99□□□□□ -0.33
CCHCR1-215ENST00000488920 CDH7Q9ULB5 785 aa12.99□□□□□ -0.33
CCHCR1-215ENST00000488920 NUMBLQ9Y6R0 609 aa12.99□□□□□ -0.33
CCHCR1-215ENST00000488920 ZDBF2Q9HCK1 2354 aa12.98□□□□□ -0.33
CCHCR1-215ENST00000488920 WDR27A2RRH5 827 aa12.98□□□□□ -0.33
CCHCR1-215ENST00000488920 STK25O00506 426 aa12.98□□□□□ -0.33
CCHCR1-215ENST00000488920 PI15O43692 258 aa12.98□□□□□ -0.33
CCHCR1-215ENST00000488920 SEC24AO95486 1093 aa12.98□□□□□ -0.33
CCHCR1-215ENST00000488920 LRPAP1P30533 357 aa12.98□□□□□ -0.33
CCHCR1-215ENST00000488920 TXLNAP40222 546 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms