RNA–Protein interactions for RNA: ENST00000488905.1

HDAC6-231, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 492 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-231ENST00000488905 EIF4ENIF1Q9NRA8 985 aaKnown RBP20.18■□□□□ 0.82
HDAC6-231ENST00000488905 CNTN3Q9P232 1028 aa20.18■□□□□ 0.82
HDAC6-231ENST00000488905 RBM19Q9Y4C8 960 aaKnown RBP20.18■□□□□ 0.82
HDAC6-231ENST00000488905 HARSP12081 509 aaKnown RBP20.17■□□□□ 0.82
HDAC6-231ENST00000488905 KCNE1P15382 129 aa20.17■□□□□ 0.82
HDAC6-231ENST00000488905 DTHD1Q6ZMT9 781 aa20.17■□□□□ 0.82
HDAC6-231ENST00000488905 ACAP3Q96P50 834 aa20.17■□□□□ 0.82
HDAC6-231ENST00000488905 KXD1Q9BQD3 176 aa20.17■□□□□ 0.82
HDAC6-231ENST00000488905 TIPINQ9BVW5 301 aa20.17■□□□□ 0.82
HDAC6-231ENST00000488905 ARHGEF37A1IGU5 675 aa20.16■□□□□ 0.82
HDAC6-231ENST00000488905 WDR27A2RRH5 827 aa20.16■□□□□ 0.82
HDAC6-231ENST00000488905 SYN3O14994 580 aa20.16■□□□□ 0.82
HDAC6-231ENST00000488905 SLC16A4O15374 487 aa20.16■□□□□ 0.82
HDAC6-231ENST00000488905 RHOP08100 348 aa20.16■□□□□ 0.82
HDAC6-231ENST00000488905 GLULP15104 373 aa20.16■□□□□ 0.82
HDAC6-231ENST00000488905 GUCY2CP25092 1073 aa20.16■□□□□ 0.82
HDAC6-231ENST00000488905 SNW1Q13573 536 aaKnown RBP20.16■□□□□ 0.82
HDAC6-231ENST00000488905 MLF2Q15773 248 aaPredicted RBP20.16■□□□□ 0.82
HDAC6-231ENST00000488905 SLC5A9Q2M3M2 681 aa20.16■□□□□ 0.82
HDAC6-231ENST00000488905 C1orf210Q8IVY1 113 aa20.16■□□□□ 0.82
HDAC6-231ENST00000488905 TCHPQ9BT92 498 aa20.16■□□□□ 0.82
HDAC6-231ENST00000488905 DDX23Q9BUQ8 820 aaKnown RBP20.16■□□□□ 0.82
HDAC6-231ENST00000488905 ANKFY1Q9P2R3 1169 aa20.16■□□□□ 0.82
HDAC6-231ENST00000488905 MRPS23Q9Y3D9 190 aaKnown RBP20.16■□□□□ 0.82
HDAC6-231ENST00000488905 R4GN57 208 aa20.16■□□□□ 0.82
HDAC6-231ENST00000488905 COL4A2P08572 1712 aa20.16■□□□□ 0.82
HDAC6-231ENST00000488905 ANK1P16157 1881 aa20.16■□□□□ 0.82
HDAC6-231ENST00000488905 CACNA1AO00555 2505 aa20.15■□□□□ 0.82
HDAC6-231ENST00000488905 KANSL1LA0AUZ9 987 aa20.15■□□□□ 0.82
HDAC6-231ENST00000488905 MEFVO15553 781 aaPredicted RBP20.15■□□□□ 0.82
HDAC6-231ENST00000488905 LRG1P02750 347 aa20.15■□□□□ 0.82
HDAC6-231ENST00000488905 PFKPQ01813 784 aa20.15■□□□□ 0.82
HDAC6-231ENST00000488905 PRKCQQ04759 706 aa20.15■□□□□ 0.82
HDAC6-231ENST00000488905 NOLC1Q14978 699 aaKnown RBP eCLIP20.15■□□□□ 0.82
HDAC6-231ENST00000488905 ZNF461Q8TAF7 563 aa20.15■□□□□ 0.82
HDAC6-231ENST00000488905 C18orf25Q96B23 403 aaPredicted RBP20.15■□□□□ 0.82
HDAC6-231ENST00000488905 SEMA4AQ9H3S1 761 aa20.15■□□□□ 0.82
HDAC6-231ENST00000488905 AVENQ9NQS1 362 aaPredicted RBP20.15■□□□□ 0.82
HDAC6-231ENST00000488905 GDE1Q9NZC3 331 aa20.15■□□□□ 0.82
HDAC6-231ENST00000488905 KIF3AQ9Y496 699 aa20.15■□□□□ 0.82
HDAC6-231ENST00000488905 NUB1Q9Y5A7 615 aa20.15■□□□□ 0.82
HDAC6-231ENST00000488905 F5P12259 2224 aa20.14■□□□□ 0.81
HDAC6-231ENST00000488905 TICRRQ7Z2Z1 1910 aa20.14■□□□□ 0.81
HDAC6-231ENST00000488905 PRRG1O14668 218 aa20.14■□□□□ 0.81
HDAC6-231ENST00000488905 LRRN2O75325 713 aa20.14■□□□□ 0.81
HDAC6-231ENST00000488905 ABLIM3O94929 683 aa20.14■□□□□ 0.81
HDAC6-231ENST00000488905 LMNAP02545 664 aaKnown RBP20.14■□□□□ 0.81
HDAC6-231ENST00000488905 CEBPBP17676 345 aa20.14■□□□□ 0.81
HDAC6-231ENST00000488905 ELF1P32519 619 aa20.14■□□□□ 0.81
HDAC6-231ENST00000488905 RPL9P32969 192 aaKnown RBP20.14■□□□□ 0.81
HDAC6-231ENST00000488905 ATP2C1P98194 919 aaPredicted RBP20.14■□□□□ 0.81
HDAC6-231ENST00000488905 RAD51AP2Q09MP3 1159 aa20.14■□□□□ 0.81
HDAC6-231ENST00000488905 STRN3Q13033 797 aa20.14■□□□□ 0.81
HDAC6-231ENST00000488905 ZRSR1Q15695 479 aaKnown RBP20.14■□□□□ 0.81
HDAC6-231ENST00000488905 HYIQ5T013 277 aa20.14■□□□□ 0.81
HDAC6-231ENST00000488905 ZC3H14Q6PJT7 736 aaKnown RBP20.14■□□□□ 0.81
HDAC6-231ENST00000488905 SPIRE2Q8WWL2 714 aa20.14■□□□□ 0.81
HDAC6-231ENST00000488905 ZBTB45Q96K62 511 aaPredicted RBP20.14■□□□□ 0.81
HDAC6-231ENST00000488905 NTPCRQ9BSD7 190 aaKnown RBP20.14■□□□□ 0.81
HDAC6-231ENST00000488905 TSC2P49815 1807 aa20.13■□□□□ 0.81
HDAC6-231ENST00000488905 SFI1A8K8P3 1242 aa20.13■□□□□ 0.81
HDAC6-231ENST00000488905 H7C4K7 107 aa20.13■□□□□ 0.81
HDAC6-231ENST00000488905 TBC1D4O60343 1298 aa20.13■□□□□ 0.81
HDAC6-231ENST00000488905 ECI2O75521 394 aa20.13■□□□□ 0.81
HDAC6-231ENST00000488905 TOM1L1O75674 476 aa20.13■□□□□ 0.81
HDAC6-231ENST00000488905 SP9P0CG40 484 aa20.13■□□□□ 0.81
HDAC6-231ENST00000488905 PLS3P13797 630 aa20.13■□□□□ 0.81
HDAC6-231ENST00000488905 ATF2P15336 505 aa20.13■□□□□ 0.81
HDAC6-231ENST00000488905 ARPP19P56211 112 aa20.13■□□□□ 0.81
HDAC6-231ENST00000488905 MRPL58Q14197 206 aaKnown RBP20.13■□□□□ 0.81
HDAC6-231ENST00000488905 C8orf34Q49A92 452 aa20.13■□□□□ 0.81
HDAC6-231ENST00000488905 SLC44A4Q53GD3 710 aa20.13■□□□□ 0.81
HDAC6-231ENST00000488905 RILPL1Q5EBL4 403 aa20.13■□□□□ 0.81
HDAC6-231ENST00000488905 MCTP1Q6DN14 999 aa20.13■□□□□ 0.81
HDAC6-231ENST00000488905 TMEM161BQ8NDZ6 487 aa20.13■□□□□ 0.81
HDAC6-231ENST00000488905 KCNG4Q8TDN1 519 aa20.13■□□□□ 0.81
HDAC6-231ENST00000488905 SUSD3Q96L08 255 aa20.13■□□□□ 0.81
HDAC6-231ENST00000488905 PNMA5Q96PV4 448 aa20.13■□□□□ 0.81
HDAC6-231ENST00000488905 FBXL5Q9UKA1 691 aa20.13■□□□□ 0.81
HDAC6-231ENST00000488905 INSL5Q9Y5Q6 135 aa20.13■□□□□ 0.81
HDAC6-231ENST00000488905 CEP250Q9BV73 2442 aa20.12■□□□□ 0.81
HDAC6-231ENST00000488905 MAPTP10636 758 aaKnown RBP20.12■□□□□ 0.81
HDAC6-231ENST00000488905 PTPN2P17706 415 aa20.12■□□□□ 0.81
HDAC6-231ENST00000488905 MCM4P33991 863 aa20.12■□□□□ 0.81
HDAC6-231ENST00000488905 SMTNP53814 917 aa20.12■□□□□ 0.81
HDAC6-231ENST00000488905 UBXN2BQ14CS0 331 aa20.12■□□□□ 0.81
HDAC6-231ENST00000488905 SEZ6Q53EL9 994 aa20.12■□□□□ 0.81
HDAC6-231ENST00000488905 ZNF280DQ6N043 979 aa20.12■□□□□ 0.81
HDAC6-231ENST00000488905 TCEAL8Q8IYN2 117 aa20.12■□□□□ 0.81
HDAC6-231ENST00000488905 KCTD17Q8N5Z5 321 aa20.12■□□□□ 0.81
HDAC6-231ENST00000488905 SYT2Q8N9I0 419 aaPredicted RBP20.12■□□□□ 0.81
HDAC6-231ENST00000488905 MCRS1Q96EZ8 462 aa20.12■□□□□ 0.81
HDAC6-231ENST00000488905 BCO2Q9BYV7 579 aa20.12■□□□□ 0.81
HDAC6-231ENST00000488905 OSBPL6Q9BZF3 934 aa20.12■□□□□ 0.81
HDAC6-231ENST00000488905 CYP4F11Q9HBI6 524 aa20.12■□□□□ 0.81
HDAC6-231ENST00000488905 KCND2Q9NZV8 630 aa20.12■□□□□ 0.81
HDAC6-231ENST00000488905 TUBGCP4Q9UGJ1 667 aa20.12■□□□□ 0.81
HDAC6-231ENST00000488905 GPR179Q6PRD1 2367 aa20.11■□□□□ 0.81
HDAC6-231ENST00000488905 SLC12A3P55017 1021 aa20.11■□□□□ 0.81
HDAC6-231ENST00000488905 FOXK2Q01167 660 aa20.11■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms