RNA–Protein interactions for RNA: ENST00000488765.1

MCF2L-229, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 2

Gene MCF2L, Length 3,205 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-229ENST00000488765 BANF1O75531 89 aa17.15■□□□□ 0.34
MCF2L-229ENST00000488765 VIL1P09327 827 aaKnown RBP17.15■□□□□ 0.34
MCF2L-229ENST00000488765 KITP10721 976 aa17.15■□□□□ 0.34
MCF2L-229ENST00000488765 CTC1Q2NKJ3 1217 aa17.15■□□□□ 0.34
MCF2L-229ENST00000488765 SFT2D3Q587I9 215 aa17.15■□□□□ 0.34
MCF2L-229ENST00000488765 SEL1L2Q5TEA6 688 aa17.15■□□□□ 0.34
MCF2L-229ENST00000488765 C1orf146Q5VVC0 180 aa17.15■□□□□ 0.34
MCF2L-229ENST00000488765 KRT79Q5XKE5 535 aa17.15■□□□□ 0.34
MCF2L-229ENST00000488765 RIPOR1Q6ZS17 1223 aa17.15■□□□□ 0.34
MCF2L-229ENST00000488765 ALYREFQ86V81 257 aaKnown RBP17.15■□□□□ 0.34
MCF2L-229ENST00000488765 SESTD1Q86VW0 696 aa17.15■□□□□ 0.34
MCF2L-229ENST00000488765 ANKRD35Q8N283 1001 aa17.15■□□□□ 0.34
MCF2L-229ENST00000488765 SLC44A5Q8NCS7 719 aa17.15■□□□□ 0.34
MCF2L-229ENST00000488765 TGFBRAP1Q8WUH2 860 aa17.15■□□□□ 0.34
MCF2L-229ENST00000488765 RAD54LQ92698 747 aa17.15■□□□□ 0.34
MCF2L-229ENST00000488765 GRAMD1AQ96CP6 724 aa17.15■□□□□ 0.34
MCF2L-229ENST00000488765 SRPK1Q96SB4 655 aaKnown RBP17.15■□□□□ 0.34
MCF2L-229ENST00000488765 RIC8AQ9NPQ8 531 aa17.15■□□□□ 0.34
MCF2L-229ENST00000488765 BARX2Q9UMQ3 279 aaPredicted RBP17.15■□□□□ 0.34
MCF2L-229ENST00000488765 MYH3P11055 1940 aa17.15■□□□□ 0.34
MCF2L-229ENST00000488765 ANKRD62A6NC57 917 aa17.14■□□□□ 0.33
MCF2L-229ENST00000488765 AKAP3O75969 853 aa17.14■□□□□ 0.33
MCF2L-229ENST00000488765 DRAP1Q14919 205 aaPredicted RBP17.14■□□□□ 0.33
MCF2L-229ENST00000488765 IYDQ6PHW0 289 aa17.14■□□□□ 0.33
MCF2L-229ENST00000488765 OLFML1Q6UWY5 402 aa17.14■□□□□ 0.33
MCF2L-229ENST00000488765 RNF207Q6ZRF8 634 aa17.14■□□□□ 0.33
MCF2L-229ENST00000488765 NEK8Q86SG6 692 aa17.14■□□□□ 0.33
MCF2L-229ENST00000488765 SYT2Q8N9I0 419 aaPredicted RBP17.14■□□□□ 0.33
MCF2L-229ENST00000488765 RIN3Q8TB24 985 aa17.14■□□□□ 0.33
MCF2L-229ENST00000488765 ZNF75CPQ92670 426 aaPredicted RBP17.14■□□□□ 0.33
MCF2L-229ENST00000488765 KANSL3Q9P2N6 904 aa17.14■□□□□ 0.33
MCF2L-229ENST00000488765 ANAPC5Q9UJX4 755 aa17.14■□□□□ 0.33
MCF2L-229ENST00000488765 TRAF3IP3Q9Y228 551 aa17.14■□□□□ 0.33
MCF2L-229ENST00000488765 PNPLA7Q6ZV29 1317 aa17.14■□□□□ 0.33
MCF2L-229ENST00000488765 NID2Q14112 1375 aa17.14■□□□□ 0.33
MCF2L-229ENST00000488765 EYA4O95677 639 aa17.14■□□□□ 0.33
MCF2L-229ENST00000488765 TAF1P21675 1872 aa17.14■□□□□ 0.33
MCF2L-229ENST00000488765 AQP4P55087 323 aa17.14■□□□□ 0.33
MCF2L-229ENST00000488765 GRIK5Q16478 980 aa17.14■□□□□ 0.33
MCF2L-229ENST00000488765 NCCRP1Q6ZVX7 275 aaPredicted RBP17.14■□□□□ 0.33
MCF2L-229ENST00000488765 DGKHQ86XP1 1220 aa17.14■□□□□ 0.33
MCF2L-229ENST00000488765 TREML1Q86YW5 311 aa17.14■□□□□ 0.33
MCF2L-229ENST00000488765 NSL1Q96IY1 281 aa17.14■□□□□ 0.33
MCF2L-229ENST00000488765 MARCOQ9UEW3 520 aaPredicted RBP17.14■□□□□ 0.33
MCF2L-229ENST00000488765 PARP2Q9UGN5 583 aa17.14■□□□□ 0.33
MCF2L-229ENST00000488765 ARHGAP42A6NI28 874 aa17.13■□□□□ 0.33
MCF2L-229ENST00000488765 GOLGA8SH3BPF8 625 aa17.13■□□□□ 0.33
MCF2L-229ENST00000488765 GOLGA8MH3BSY2 632 aa17.13■□□□□ 0.33
MCF2L-229ENST00000488765 DDAH1O94760 285 aa17.13■□□□□ 0.33
MCF2L-229ENST00000488765 CDK4P11802 303 aa17.13■□□□□ 0.33
MCF2L-229ENST00000488765 PPP1R2P41236 205 aa17.13■□□□□ 0.33
MCF2L-229ENST00000488765 PRKCIP41743 596 aa17.13■□□□□ 0.33
MCF2L-229ENST00000488765 PDE1CQ14123 709 aaPredicted RBP17.13■□□□□ 0.33
MCF2L-229ENST00000488765 FASTKD3Q14CZ7 662 aaKnown RBP17.13■□□□□ 0.33
MCF2L-229ENST00000488765 SGO2Q562F6 1265 aa17.13■□□□□ 0.33
MCF2L-229ENST00000488765 CMPK2Q5EBM0 449 aa17.13■□□□□ 0.33
MCF2L-229ENST00000488765 TRAPPC3LQ5T215 181 aa17.13■□□□□ 0.33
MCF2L-229ENST00000488765 C10orf76Q5T2E6 689 aa17.13■□□□□ 0.33
MCF2L-229ENST00000488765 RGS9BPQ6ZS82 235 aa17.13■□□□□ 0.33
MCF2L-229ENST00000488765 ZNF384Q8TF68 577 aa17.13■□□□□ 0.33
MCF2L-229ENST00000488765 TMEM109Q9BVC6 243 aa17.13■□□□□ 0.33
MCF2L-229ENST00000488765 DNAJC18Q9H819 358 aa17.13■□□□□ 0.33
MCF2L-229ENST00000488765 APPL1Q9UKG1 709 aa17.13■□□□□ 0.33
MCF2L-229ENST00000488765 PACSIN3Q9UKS6 424 aa17.13■□□□□ 0.33
MCF2L-229ENST00000488765 AK5Q9Y6K8 562 aa17.13■□□□□ 0.33
MCF2L-229ENST00000488765 FTLP02792 175 aaPredicted RBP17.13■□□□□ 0.33
MCF2L-229ENST00000488765 PPATQ06203 517 aa17.13■□□□□ 0.33
MCF2L-229ENST00000488765 MED21Q13503 144 aa17.13■□□□□ 0.33
MCF2L-229ENST00000488765 C2CD6Q53TS8 623 aa17.13■□□□□ 0.33
MCF2L-229ENST00000488765 USP17L2Q6R6M4 530 aa17.13■□□□□ 0.33
MCF2L-229ENST00000488765 TRMT10CQ7L0Y3 403 aaKnown RBP17.13■□□□□ 0.33
MCF2L-229ENST00000488765 GCNAQ96QF7 691 aa17.13■□□□□ 0.33
MCF2L-229ENST00000488765 CORO1BQ9BR76 489 aa17.13■□□□□ 0.33
MCF2L-229ENST00000488765 STK33Q9BYT3 514 aa17.13■□□□□ 0.33
MCF2L-229ENST00000488765 VPS37BQ9H9H4 285 aa17.13■□□□□ 0.33
MCF2L-229ENST00000488765 PVALEFA0A1B0GWK0 134 aa17.13■□□□□ 0.33
MCF2L-229ENST00000488765 C6orf229H3BNL8 230 aa17.13■□□□□ 0.33
MCF2L-229ENST00000488765 TRPA1O75762 1119 aa17.13■□□□□ 0.33
MCF2L-229ENST00000488765 MLH1P40692 756 aa17.13■□□□□ 0.33
MCF2L-229ENST00000488765 TNNI2P48788 182 aa17.13■□□□□ 0.33
MCF2L-229ENST00000488765 SPDYCQ5MJ68 293 aa17.13■□□□□ 0.33
MCF2L-229ENST00000488765 CROCCP2Q86T23 111 aa17.13■□□□□ 0.33
MCF2L-229ENST00000488765 GPBP1Q86WP2 473 aa17.13■□□□□ 0.33
MCF2L-229ENST00000488765 NME8Q8N427 588 aa17.13■□□□□ 0.33
MCF2L-229ENST00000488765 GSTCDQ8NEC7 633 aa17.13■□□□□ 0.33
MCF2L-229ENST00000488765 MAML1Q92585 1016 aa17.13■□□□□ 0.33
MCF2L-229ENST00000488765 COA7Q96BR5 231 aa17.13■□□□□ 0.33
MCF2L-229ENST00000488765 UMODL1Q5DID0 1318 aa17.12■□□□□ 0.33
MCF2L-229ENST00000488765 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.12■□□□□ 0.33
MCF2L-229ENST00000488765 LSM1O15116 133 aaKnown RBP17.12■□□□□ 0.33
MCF2L-229ENST00000488765 CDH16O75309 829 aa17.12■□□□□ 0.33
MCF2L-229ENST00000488765 KRT4P19013 534 aa17.12■□□□□ 0.33
MCF2L-229ENST00000488765 GJA8P48165 433 aa17.12■□□□□ 0.33
MCF2L-229ENST00000488765 EPHB1P54762 984 aa17.12■□□□□ 0.33
MCF2L-229ENST00000488765 DRG2P55039 364 aaKnown RBP17.12■□□□□ 0.33
MCF2L-229ENST00000488765 GK3PQ14409 553 aa17.12■□□□□ 0.33
MCF2L-229ENST00000488765 MMEL1Q495T6 779 aa17.12■□□□□ 0.33
MCF2L-229ENST00000488765 SH2D4BQ5SQS7 431 aa17.12■□□□□ 0.33
MCF2L-229ENST00000488765 FYB2Q5VWT5 728 aa17.12■□□□□ 0.33
MCF2L-229ENST00000488765 ZNF554Q86TJ5 538 aa17.12■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms