RNA–Protein interactions for RNA: ENST00000488683.1

CLIC4-202, Transcript of chloride intracellular channel 4, humanhuman

TSL 2

Gene CLIC4, Length 2,723 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC4-202ENST00000488683 ATXN2Q99700 1313 aaKnown RBP13.53□□□□□ -0.24
CLIC4-202ENST00000488683 VNN1O95497 513 aa13.53□□□□□ -0.24
CLIC4-202ENST00000488683 HLA-DRAP01903 254 aa13.53□□□□□ -0.24
CLIC4-202ENST00000488683 PAEPP09466 180 aa13.53□□□□□ -0.24
CLIC4-202ENST00000488683 HSPA6P17066 643 aa13.53□□□□□ -0.24
CLIC4-202ENST00000488683 ATP4AP20648 1035 aa13.53□□□□□ -0.24
CLIC4-202ENST00000488683 TNFSF9P41273 254 aa13.53□□□□□ -0.24
CLIC4-202ENST00000488683 MNAT1P51948 309 aa13.53□□□□□ -0.24
CLIC4-202ENST00000488683 ITGA8P53708 1063 aa13.53□□□□□ -0.24
CLIC4-202ENST00000488683 EIF3BP55884 814 aaKnown RBP13.53□□□□□ -0.24
CLIC4-202ENST00000488683 RPL7AP62424 266 aaKnown RBP13.53□□□□□ -0.24
CLIC4-202ENST00000488683 AUHQ13825 339 aaKnown RBP13.53□□□□□ -0.24
CLIC4-202ENST00000488683 TMEM132BQ14DG7 1078 aa13.53□□□□□ -0.24
CLIC4-202ENST00000488683 FAM133BQ5BKY9 247 aaKnown RBP13.53□□□□□ -0.24
CLIC4-202ENST00000488683 SPDYCQ5MJ68 293 aa13.53□□□□□ -0.24
CLIC4-202ENST00000488683 MMS22LQ6ZRQ5 1243 aa13.53□□□□□ -0.24
CLIC4-202ENST00000488683 CCDC121Q6ZUS5 278 aa13.53□□□□□ -0.24
CLIC4-202ENST00000488683 ASAP3Q8TDY4 903 aa13.53□□□□□ -0.24
CLIC4-202ENST00000488683 ATXN2LQ8WWM7 1075 aaKnown RBP13.53□□□□□ -0.24
CLIC4-202ENST00000488683 NTPCRQ9BSD7 190 aaKnown RBP13.53□□□□□ -0.24
CLIC4-202ENST00000488683 TARS2Q9BW92 718 aaKnown RBP13.53□□□□□ -0.24
CLIC4-202ENST00000488683 MYPNQ86TC9 1320 aa13.53□□□□□ -0.24
CLIC4-202ENST00000488683 SRRM3A6NNA2 597 aaPredicted RBP13.52□□□□□ -0.24
CLIC4-202ENST00000488683 ZBED4O75132 1171 aa13.52□□□□□ -0.24
CLIC4-202ENST00000488683 BANF1O75531 89 aa13.52□□□□□ -0.24
CLIC4-202ENST00000488683 UNGP13051 313 aaPredicted RBP13.52□□□□□ -0.24
CLIC4-202ENST00000488683 PIK3CAP42336 1068 aa13.52□□□□□ -0.24
CLIC4-202ENST00000488683 LIG4P49917 911 aa13.52□□□□□ -0.24
CLIC4-202ENST00000488683 ACTR2P61160 394 aa13.52□□□□□ -0.24
CLIC4-202ENST00000488683 OSTNP61366 133 aa13.52□□□□□ -0.24
CLIC4-202ENST00000488683 TXNRD3NBQ6F5E7 133 aa13.52□□□□□ -0.24
CLIC4-202ENST00000488683 MICALL2Q8IY33 904 aa13.52□□□□□ -0.24
CLIC4-202ENST00000488683 MCOLN2Q8IZK6 566 aa13.52□□□□□ -0.24
CLIC4-202ENST00000488683 GPD1LQ8N335 351 aa13.52□□□□□ -0.24
CLIC4-202ENST00000488683 TMC2Q8TDI7 906 aa13.52□□□□□ -0.24
CLIC4-202ENST00000488683 WRNIP1Q96S55 665 aa13.52□□□□□ -0.24
CLIC4-202ENST00000488683 PDLIM7Q9NR12 457 aa13.52□□□□□ -0.24
CLIC4-202ENST00000488683 MAP3K20Q9NYL2 800 aaKnown RBP13.52□□□□□ -0.24
CLIC4-202ENST00000488683 PODXLO00592 558 aa13.52□□□□□ -0.25
CLIC4-202ENST00000488683 RASGRF2O14827 1237 aa13.52□□□□□ -0.25
CLIC4-202ENST00000488683 ECEL1O95672 775 aa13.52□□□□□ -0.25
CLIC4-202ENST00000488683 GGPS1O95749 300 aa13.52□□□□□ -0.25
CLIC4-202ENST00000488683 CLUL1Q15846 466 aa13.52□□□□□ -0.25
CLIC4-202ENST00000488683 ERMARDQ5T6L9 678 aa13.52□□□□□ -0.25
CLIC4-202ENST00000488683 CIAPIN1Q6FI81 312 aa13.52□□□□□ -0.25
CLIC4-202ENST00000488683 SCARA5Q6ZMJ2 495 aa13.52□□□□□ -0.25
CLIC4-202ENST00000488683 EXOC3L1Q86VI1 746 aa13.52□□□□□ -0.25
CLIC4-202ENST00000488683 CNKSR2Q8WXI2 1034 aa13.52□□□□□ -0.25
CLIC4-202ENST00000488683 ART4Q93070 314 aa13.52□□□□□ -0.25
CLIC4-202ENST00000488683 KCNK9Q9NPC2 374 aa13.52□□□□□ -0.25
CLIC4-202ENST00000488683 UVRAGQ9P2Y5 699 aa13.52□□□□□ -0.25
CLIC4-202ENST00000488683 SAE1Q9UBE0 346 aaPredicted RBP13.52□□□□□ -0.25
CLIC4-202ENST00000488683 GJB1P08034 283 aa13.51□□□□□ -0.25
CLIC4-202ENST00000488683 MARK3P27448 753 aa13.51□□□□□ -0.25
CLIC4-202ENST00000488683 MPP2Q14168 576 aa13.51□□□□□ -0.25
CLIC4-202ENST00000488683 SYCP2LQ5T4T6 812 aa13.51□□□□□ -0.25
CLIC4-202ENST00000488683 ZNF772Q68DY9 489 aaPredicted RBP13.51□□□□□ -0.25
CLIC4-202ENST00000488683 CYP4F22Q6NT55 531 aa13.51□□□□□ -0.25
CLIC4-202ENST00000488683 CACNA2D3Q8IZS8 1091 aa13.51□□□□□ -0.25
CLIC4-202ENST00000488683 SAMD3Q8N6K7 520 aa13.51□□□□□ -0.25
CLIC4-202ENST00000488683 REPS2Q8NFH8 660 aa13.51□□□□□ -0.25
CLIC4-202ENST00000488683 MORC4Q8TE76 937 aa13.51□□□□□ -0.25
CLIC4-202ENST00000488683 KIFAP3Q92845 792 aa13.51□□□□□ -0.25
CLIC4-202ENST00000488683 CYP26B1Q9NR63 512 aa13.51□□□□□ -0.25
CLIC4-202ENST00000488683 INTS9Q9NV88 658 aaKnown RBP13.51□□□□□ -0.25
CLIC4-202ENST00000488683 FBXO40Q9UH90 709 aa13.51□□□□□ -0.25
CLIC4-202ENST00000488683 PCDHB4Q9Y5E5 795 aa13.51□□□□□ -0.25
CLIC4-202ENST00000488683 LCTP09848 1927 aa13.51□□□□□ -0.25
CLIC4-202ENST00000488683 CST3P01034 146 aaPredicted RBP13.51□□□□□ -0.25
CLIC4-202ENST00000488683 CCND2P30279 289 aa13.51□□□□□ -0.25
CLIC4-202ENST00000488683 ADCY8P40145 1251 aa13.51□□□□□ -0.25
CLIC4-202ENST00000488683 CRELD2Q6UXH1 353 aaPredicted RBP13.51□□□□□ -0.25
CLIC4-202ENST00000488683 C15orf39Q6ZRI6 1047 aa13.51□□□□□ -0.25
CLIC4-202ENST00000488683 HOOK3Q86VS8 718 aa13.51□□□□□ -0.25
CLIC4-202ENST00000488683 SLC17A8Q8NDX2 589 aa13.51□□□□□ -0.25
CLIC4-202ENST00000488683 HVCN1Q96D96 273 aa13.51□□□□□ -0.25
CLIC4-202ENST00000488683 CHMP6Q96FZ7 201 aa13.51□□□□□ -0.25
CLIC4-202ENST00000488683 FNBP1Q96RU3 617 aa13.51□□□□□ -0.25
CLIC4-202ENST00000488683 PPP1R16BQ96T49 567 aa13.51□□□□□ -0.25
CLIC4-202ENST00000488683 FAM129AQ9BZQ8 928 aa13.51□□□□□ -0.25
CLIC4-202ENST00000488683 JPH1Q9HDC5 661 aaPredicted RBP13.51□□□□□ -0.25
CLIC4-202ENST00000488683 C1orf112Q9NSG2 853 aa13.51□□□□□ -0.25
CLIC4-202ENST00000488683 TJP2Q9UDY2 1190 aa13.51□□□□□ -0.25
CLIC4-202ENST00000488683 NUB1Q9Y5A7 615 aa13.51□□□□□ -0.25
CLIC4-202ENST00000488683 CSDE1O75534 798 aaKnown RBP13.5□□□□□ -0.25
CLIC4-202ENST00000488683 ITGBL1O95965 494 aaPredicted RBP13.5□□□□□ -0.25
CLIC4-202ENST00000488683 CDR1P51861 262 aa13.5□□□□□ -0.25
CLIC4-202ENST00000488683 POLGP54098 1239 aaPredicted RBP13.5□□□□□ -0.25
CLIC4-202ENST00000488683 HIRAP54198 1017 aaPredicted RBP13.5□□□□□ -0.25
CLIC4-202ENST00000488683 ICE2Q659A1 982 aa13.5□□□□□ -0.25
CLIC4-202ENST00000488683 YTHDF3Q7Z739 585 aaKnown RBP13.5□□□□□ -0.25
CLIC4-202ENST00000488683 SPATS2Q86XZ4 545 aaKnown RBP13.5□□□□□ -0.25
CLIC4-202ENST00000488683 C12orf50Q8NA57 414 aaPredicted RBP13.5□□□□□ -0.25
CLIC4-202ENST00000488683 PGM2Q96G03 612 aa13.5□□□□□ -0.25
CLIC4-202ENST00000488683 SLC40A1Q9NP59 571 aa13.5□□□□□ -0.25
CLIC4-202ENST00000488683 A1CFQ9NQ94 594 aaKnown RBP13.5□□□□□ -0.25
CLIC4-202ENST00000488683 ARHGAP28Q9P2N2 729 aa13.5□□□□□ -0.25
CLIC4-202ENST00000488683 MTRF1LQ9UGC7 380 aaKnown RBP13.5□□□□□ -0.25
CLIC4-202ENST00000488683 MTUS1Q9ULD2 1270 aa13.5□□□□□ -0.25
CLIC4-202ENST00000488683 PHIPQ8WWQ0 1821 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms