RNA–Protein interactions for RNA: ENST00000488494.5

ITGB1-215, Transcript of integrin subunit beta 1, humanhuman

TSL 4

Gene ITGB1, Length 540 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-215ENST00000488494 RPL9P32969 192 aaKnown RBP19.33■□□□□ 0.68
ITGB1-215ENST00000488494 LIN9Q5TKA1 542 aa19.33■□□□□ 0.68
ITGB1-215ENST00000488494 LILRA6Q6PI73 481 aa19.33■□□□□ 0.68
ITGB1-215ENST00000488494 TMEM130Q8N3G9 435 aa19.33■□□□□ 0.68
ITGB1-215ENST00000488494 HDAC7Q8WUI4 952 aa19.33■□□□□ 0.68
ITGB1-215ENST00000488494 SMG7Q92540 1137 aaKnown RBP19.33■□□□□ 0.68
ITGB1-215ENST00000488494 EDAQ92838 391 aa19.33■□□□□ 0.68
ITGB1-215ENST00000488494 ZNF707Q96C28 371 aaPredicted RBP19.33■□□□□ 0.68
ITGB1-215ENST00000488494 HVCN1Q96D96 273 aa19.33■□□□□ 0.68
ITGB1-215ENST00000488494 IKZF4Q9H2S9 585 aa19.33■□□□□ 0.68
ITGB1-215ENST00000488494 MRPL44Q9H9J2 332 aaKnown RBP19.33■□□□□ 0.68
ITGB1-215ENST00000488494 ZDHHC7Q9NXF8 308 aa19.33■□□□□ 0.68
ITGB1-215ENST00000488494 MTRRQ9UBK8 725 aa19.33■□□□□ 0.68
ITGB1-215ENST00000488494 NUB1Q9Y5A7 615 aa19.33■□□□□ 0.68
ITGB1-215ENST00000488494 CLUHO75153 1309 aa19.32■□□□□ 0.68
ITGB1-215ENST00000488494 ANKRD63C9JTQ0 380 aa19.32■□□□□ 0.68
ITGB1-215ENST00000488494 CUTAO60888 179 aa19.32■□□□□ 0.68
ITGB1-215ENST00000488494 PPP1R37O75864 691 aa19.32■□□□□ 0.68
ITGB1-215ENST00000488494 MCM4P33991 863 aa19.32■□□□□ 0.68
ITGB1-215ENST00000488494 ZXDAP98168 799 aa19.32■□□□□ 0.68
ITGB1-215ENST00000488494 SHC4Q6S5L8 630 aa19.32■□□□□ 0.68
ITGB1-215ENST00000488494 ANKS3Q6ZW76 656 aa19.32■□□□□ 0.68
ITGB1-215ENST00000488494 ZNF720Q7Z2F6 126 aa19.32■□□□□ 0.68
ITGB1-215ENST00000488494 KCNG4Q8TDN1 519 aa19.32■□□□□ 0.68
ITGB1-215ENST00000488494 RPF1Q9H9Y2 349 aaKnown RBP19.32■□□□□ 0.68
ITGB1-215ENST00000488494 USTQ9Y2C2 406 aa19.32■□□□□ 0.68
ITGB1-215ENST00000488494 CDY1Q9Y6F8 540 aa19.32■□□□□ 0.68
ITGB1-215ENST00000488494 FRMD3A2A2Y4 597 aa19.31■□□□□ 0.68
ITGB1-215ENST00000488494 LACTBL1A8MY62 500 aa19.31■□□□□ 0.68
ITGB1-215ENST00000488494 GCNT3O95395 438 aa19.31■□□□□ 0.68
ITGB1-215ENST00000488494 OR1D2P34982 312 aa19.31■□□□□ 0.68
ITGB1-215ENST00000488494 CASP5P51878 434 aa19.31■□□□□ 0.68
ITGB1-215ENST00000488494 E2F4Q16254 413 aa19.31■□□□□ 0.68
ITGB1-215ENST00000488494 RSPO2Q6UXX9 243 aaPredicted RBP19.31■□□□□ 0.68
ITGB1-215ENST00000488494 ZDHHC14Q8IZN3 488 aa19.31■□□□□ 0.68
ITGB1-215ENST00000488494 STAMQ92783 540 aa19.31■□□□□ 0.68
ITGB1-215ENST00000488494 DHX58Q96C10 678 aa19.31■□□□□ 0.68
ITGB1-215ENST00000488494 FAM212AQ96EL1 285 aa19.31■□□□□ 0.68
ITGB1-215ENST00000488494 FGFBP2Q9BYJ0 223 aa19.31■□□□□ 0.68
ITGB1-215ENST00000488494 RHOBTB2Q9BYZ6 727 aa19.31■□□□□ 0.68
ITGB1-215ENST00000488494 PIDD1Q9HB75 910 aa19.31■□□□□ 0.68
ITGB1-215ENST00000488494 OLFML3Q9NRN5 406 aa19.31■□□□□ 0.68
ITGB1-215ENST00000488494 CPSF3Q9UKF6 684 aaKnown RBP19.31■□□□□ 0.68
ITGB1-215ENST00000488494 UBQLN1Q9UMX0 589 aaKnown RBP19.31■□□□□ 0.68
ITGB1-215ENST00000488494 ZMYND10O75800 440 aa19.3■□□□□ 0.68
ITGB1-215ENST00000488494 ASGR2P07307 311 aa19.3■□□□□ 0.68
ITGB1-215ENST00000488494 C8AP07357 584 aa19.3■□□□□ 0.68
ITGB1-215ENST00000488494 NFICP08651 508 aa19.3■□□□□ 0.68
ITGB1-215ENST00000488494 ME1P48163 572 aa19.3■□□□□ 0.68
ITGB1-215ENST00000488494 GUCY2FP51841 1108 aa19.3■□□□□ 0.68
ITGB1-215ENST00000488494 KCNA1Q09470 495 aa19.3■□□□□ 0.68
ITGB1-215ENST00000488494 RAB33AQ14088 237 aa19.3■□□□□ 0.68
ITGB1-215ENST00000488494 VARS2Q5ST30 1063 aaKnown RBP19.3■□□□□ 0.68
ITGB1-215ENST00000488494 AXDND1Q5T1B0 1012 aaPredicted RBP19.3■□□□□ 0.68
ITGB1-215ENST00000488494 L1TD1Q5T7N2 865 aaKnown RBP19.3■□□□□ 0.68
ITGB1-215ENST00000488494 ADALQ6DHV7 355 aa19.3■□□□□ 0.68
ITGB1-215ENST00000488494 CYP26C1Q6V0L0 522 aa19.3■□□□□ 0.68
ITGB1-215ENST00000488494 TRIM67Q6ZTA4 783 aa19.3■□□□□ 0.68
ITGB1-215ENST00000488494 HFE2Q6ZVN8 426 aa19.3■□□□□ 0.68
ITGB1-215ENST00000488494 OTOP3Q7RTS5 596 aa19.3■□□□□ 0.68
ITGB1-215ENST00000488494 ACSF2Q96CM8 615 aaPredicted RBP19.3■□□□□ 0.68
ITGB1-215ENST00000488494 STRA6Q9BX79 667 aa19.3■□□□□ 0.68
ITGB1-215ENST00000488494 PRKD2Q9BZL6 878 aa19.3■□□□□ 0.68
ITGB1-215ENST00000488494 TNMDQ9H2S6 317 aa19.3■□□□□ 0.68
ITGB1-215ENST00000488494 WDR6Q9NNW5 1121 aaKnown RBP19.3■□□□□ 0.68
ITGB1-215ENST00000488494 PANK4Q9NVE7 773 aa19.3■□□□□ 0.68
ITGB1-215ENST00000488494 HCN4Q9Y3Q4 1203 aa19.3■□□□□ 0.68
ITGB1-215ENST00000488494 BACE2Q9Y5Z0 518 aa19.3■□□□□ 0.68
ITGB1-215ENST00000488494 TMEM221A6NGB7 291 aa19.29■□□□□ 0.68
ITGB1-215ENST00000488494 M0R296 226 aa19.29■□□□□ 0.68
ITGB1-215ENST00000488494 SYN3O14994 580 aa19.29■□□□□ 0.68
ITGB1-215ENST00000488494 PAPLNO95428 1278 aa19.29■□□□□ 0.68
ITGB1-215ENST00000488494 LRPAP1P30533 357 aa19.29■□□□□ 0.68
ITGB1-215ENST00000488494 ACOT2P49753 483 aa19.29■□□□□ 0.68
ITGB1-215ENST00000488494 DNM1Q05193 864 aaKnown RBP19.29■□□□□ 0.68
ITGB1-215ENST00000488494 MTMR3Q13615 1198 aa19.29■□□□□ 0.68
ITGB1-215ENST00000488494 JADE1Q6IE81 842 aa19.29■□□□□ 0.68
ITGB1-215ENST00000488494 SLFN12LQ6IEE8 588 aa19.29■□□□□ 0.68
ITGB1-215ENST00000488494 SLC7A14Q8TBB6 771 aa19.29■□□□□ 0.68
ITGB1-215ENST00000488494 POMGNT1Q8WZA1 660 aa19.29■□□□□ 0.68
ITGB1-215ENST00000488494 SUSD3Q96L08 255 aa19.29■□□□□ 0.68
ITGB1-215ENST00000488494 ACCSQ96QU6 501 aa19.29■□□□□ 0.68
ITGB1-215ENST00000488494 CUEDC2Q9H467 287 aa19.29■□□□□ 0.68
ITGB1-215ENST00000488494 LIMD1Q9UGP4 676 aa19.29■□□□□ 0.68
ITGB1-215ENST00000488494 AGO2Q9UKV8 859 aaKnown RBP19.29■□□□□ 0.68
ITGB1-215ENST00000488494 EXOC7Q9UPT5 735 aa19.29■□□□□ 0.68
ITGB1-215ENST00000488494 GTF3C5Q9Y5Q8 519 aaPredicted RBP19.29■□□□□ 0.68
ITGB1-215ENST00000488494 STYXL1Q9Y6J8 313 aa19.29■□□□□ 0.68
ITGB1-215ENST00000488494 MTCL1Q9Y4B5 1905 aaKnown RBP19.28■□□□□ 0.68
ITGB1-215ENST00000488494 TECTAO75443 2155 aa19.28■□□□□ 0.68
ITGB1-215ENST00000488494 XPOTO43592 962 aaKnown RBP19.28■□□□□ 0.68
ITGB1-215ENST00000488494 N4BP1O75113 896 aaKnown RBP19.28■□□□□ 0.68
ITGB1-215ENST00000488494 ADRB2P07550 413 aa19.28■□□□□ 0.68
ITGB1-215ENST00000488494 TMEM132DQ14C87 1099 aa19.28■□□□□ 0.68
ITGB1-215ENST00000488494 ZBTB6Q15916 424 aa19.28■□□□□ 0.68
ITGB1-215ENST00000488494 PPM1LQ5SGD2 360 aa19.28■□□□□ 0.68
ITGB1-215ENST00000488494 ATL3Q6DD88 541 aa19.28■□□□□ 0.68
ITGB1-215ENST00000488494 CCDC65Q8IXS2 484 aa19.28■□□□□ 0.68
ITGB1-215ENST00000488494 PLCD3Q8N3E9 789 aa19.28■□□□□ 0.68
ITGB1-215ENST00000488494 IQUBQ8NA54 791 aa19.28■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms