RNA–Protein interactions for RNA: ENST00000488384.1

ERGIC3-216, Transcript of ERGIC and golgi 3, humanhuman

TSL 2

Gene ERGIC3, Length 766 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC3-216ENST00000488384 KCNC3Q14003 757 aa17.39■□□□□ 0.37
ERGIC3-216ENST00000488384 RTP2Q5QGT7 225 aa17.39■□□□□ 0.37
ERGIC3-216ENST00000488384 KIAA0319Q5VV43 1072 aa17.39■□□□□ 0.37
ERGIC3-216ENST00000488384 JADE1Q6IE81 842 aa17.39■□□□□ 0.37
ERGIC3-216ENST00000488384 KANK3Q6NY19 840 aa17.39■□□□□ 0.37
ERGIC3-216ENST00000488384 DCLRE1AQ6PJP8 1040 aa17.39■□□□□ 0.37
ERGIC3-216ENST00000488384 EP400NLQ6ZTU2 488 aa17.39■□□□□ 0.37
ERGIC3-216ENST00000488384 CD302Q8IX05 232 aa17.39■□□□□ 0.37
ERGIC3-216ENST00000488384 FAM212AQ96EL1 285 aa17.39■□□□□ 0.37
ERGIC3-216ENST00000488384 DDX27Q96GQ7 796 aaKnown RBP17.39■□□□□ 0.37
ERGIC3-216ENST00000488384 PCIF1Q9H4Z3 704 aa17.39■□□□□ 0.37
ERGIC3-216ENST00000488384 ASB7Q9H672 318 aa17.39■□□□□ 0.37
ERGIC3-216ENST00000488384 MRPL17Q9NRX2 175 aaKnown RBP17.39■□□□□ 0.37
ERGIC3-216ENST00000488384 AGPAT3Q9NRZ7 376 aa17.39■□□□□ 0.37
ERGIC3-216ENST00000488384 BARX2Q9UMQ3 279 aaPredicted RBP17.39■□□□□ 0.37
ERGIC3-216ENST00000488384 UBQLN1Q9UMX0 589 aaKnown RBP17.39■□□□□ 0.37
ERGIC3-216ENST00000488384 FSD2A1L4K1 749 aa17.38■□□□□ 0.37
ERGIC3-216ENST00000488384 GOLGA8IPA6NC78 632 aa17.38■□□□□ 0.37
ERGIC3-216ENST00000488384 GOLGA8JA6NMD2 632 aa17.38■□□□□ 0.37
ERGIC3-216ENST00000488384 C2CD2LO14523 706 aa17.38■□□□□ 0.37
ERGIC3-216ENST00000488384 KIAA0391O15091 583 aaKnown RBP17.38■□□□□ 0.37
ERGIC3-216ENST00000488384 RHOBTB3O94955 611 aa17.38■□□□□ 0.37
ERGIC3-216ENST00000488384 CYP3A5P20815 502 aa17.38■□□□□ 0.37
ERGIC3-216ENST00000488384 LRPAP1P30533 357 aa17.38■□□□□ 0.37
ERGIC3-216ENST00000488384 RPL9P32969 192 aaKnown RBP17.38■□□□□ 0.37
ERGIC3-216ENST00000488384 NDUFV1P49821 464 aa17.38■□□□□ 0.37
ERGIC3-216ENST00000488384 PNOCQ13519 176 aa17.38■□□□□ 0.37
ERGIC3-216ENST00000488384 USP41Q3LFD5 358 aa17.38■□□□□ 0.37
ERGIC3-216ENST00000488384 LEXMQ3ZCV2 418 aa17.38■□□□□ 0.37
ERGIC3-216ENST00000488384 FAM171A1Q5VUB5 890 aa17.38■□□□□ 0.37
ERGIC3-216ENST00000488384 CCDC34Q96HJ3 373 aa17.38■□□□□ 0.37
ERGIC3-216ENST00000488384 TIGD1Q96MW7 591 aa17.38■□□□□ 0.37
ERGIC3-216ENST00000488384 IPO9Q96P70 1041 aaKnown RBP17.38■□□□□ 0.37
ERGIC3-216ENST00000488384 TSPAN18Q96SJ8 248 aa17.38■□□□□ 0.37
ERGIC3-216ENST00000488384 UHRF1Q96T88 793 aaPredicted RBP17.38■□□□□ 0.37
ERGIC3-216ENST00000488384 HSPBP1Q9NZL4 362 aa17.38■□□□□ 0.37
ERGIC3-216ENST00000488384 CLEC1BQ9P126 229 aa17.38■□□□□ 0.37
ERGIC3-216ENST00000488384 DERAQ9Y315 318 aa17.38■□□□□ 0.37
ERGIC3-216ENST00000488384 C2CD2Q9Y426 696 aa17.38■□□□□ 0.37
ERGIC3-216ENST00000488384 I3L4J1 428 aa17.37■□□□□ 0.37
ERGIC3-216ENST00000488384 IL18RAPO95256 599 aa17.37■□□□□ 0.37
ERGIC3-216ENST00000488384 LDHAP00338 332 aaKnown RBP17.37■□□□□ 0.37
ERGIC3-216ENST00000488384 CNPP09543 421 aaKnown RBP17.37■□□□□ 0.37
ERGIC3-216ENST00000488384 BRCC3P46736 316 aa17.37■□□□□ 0.37
ERGIC3-216ENST00000488384 ELAVL2Q12926 359 aaKnown RBP17.37■□□□□ 0.37
ERGIC3-216ENST00000488384 KCNB1Q14721 858 aa17.37■□□□□ 0.37
ERGIC3-216ENST00000488384 TMEM132DQ14C87 1099 aa17.37■□□□□ 0.37
ERGIC3-216ENST00000488384 KNOP1Q1ED39 458 aaKnown RBP17.37■□□□□ 0.37
ERGIC3-216ENST00000488384 AAK1Q2M2I8 961 aa17.37■□□□□ 0.37
ERGIC3-216ENST00000488384 SPATA1Q5VX52 437 aa17.37■□□□□ 0.37
ERGIC3-216ENST00000488384 KIAA1841Q6NSI8 718 aa17.37■□□□□ 0.37
ERGIC3-216ENST00000488384 LLGL2Q6P1M3 1020 aa17.37■□□□□ 0.37
ERGIC3-216ENST00000488384 HS2ST1Q7LGA3 356 aa17.37■□□□□ 0.37
ERGIC3-216ENST00000488384 CBWD2Q8IUF1 395 aa17.37■□□□□ 0.37
ERGIC3-216ENST00000488384 EFCAB13Q8IY85 973 aa17.37■□□□□ 0.37
ERGIC3-216ENST00000488384 GPD1LQ8N335 351 aa17.37■□□□□ 0.37
ERGIC3-216ENST00000488384 RIN2Q8WYP3 895 aaPredicted RBP17.37■□□□□ 0.37
ERGIC3-216ENST00000488384 CCDC47Q96A33 483 aaKnown RBP17.37■□□□□ 0.37
ERGIC3-216ENST00000488384 MSLNLQ96KJ4 702 aa17.37■□□□□ 0.37
ERGIC3-216ENST00000488384 FBXL18Q96ME1 805 aa17.37■□□□□ 0.37
ERGIC3-216ENST00000488384 KLHL5Q96PQ7 755 aa17.37■□□□□ 0.37
ERGIC3-216ENST00000488384 RBAKQ9NYW8 714 aaPredicted RBP17.37■□□□□ 0.37
ERGIC3-216ENST00000488384 GTF3C5Q9Y5Q8 519 aaPredicted RBP17.37■□□□□ 0.37
ERGIC3-216ENST00000488384 HCFC2Q9Y5Z7 792 aa17.37■□□□□ 0.37
ERGIC3-216ENST00000488384 PPEF2O14830 753 aa17.36■□□□□ 0.37
ERGIC3-216ENST00000488384 CLIC2O15247 247 aa17.36■□□□□ 0.37
ERGIC3-216ENST00000488384 XPOTO43592 962 aaKnown RBP17.36■□□□□ 0.37
ERGIC3-216ENST00000488384 FGFR3P22607 806 aa17.36■□□□□ 0.37
ERGIC3-216ENST00000488384 SNRPFP62306 86 aaKnown RBP17.36■□□□□ 0.37
ERGIC3-216ENST00000488384 CLUL1Q15846 466 aa17.36■□□□□ 0.37
ERGIC3-216ENST00000488384 PRSS55Q6UWB4 352 aaPredicted RBP17.36■□□□□ 0.37
ERGIC3-216ENST00000488384 TMEM184AQ6ZMB5 413 aa17.36■□□□□ 0.37
ERGIC3-216ENST00000488384 PDZRN4Q6ZMN7 1036 aaPredicted RBP17.36■□□□□ 0.37
ERGIC3-216ENST00000488384 C12orf56Q8IXR9 622 aa17.36■□□□□ 0.37
ERGIC3-216ENST00000488384 GPR65Q8IYL9 337 aa17.36■□□□□ 0.37
ERGIC3-216ENST00000488384 BEST2Q8NFU1 509 aa17.36■□□□□ 0.37
ERGIC3-216ENST00000488384 GADD45GIP1Q8TAE8 222 aaPredicted RBP17.36■□□□□ 0.37
ERGIC3-216ENST00000488384 NOC3LQ8WTT2 800 aaKnown RBP17.36■□□□□ 0.37
ERGIC3-216ENST00000488384 SLC22A17Q8WUG5 538 aa17.36■□□□□ 0.37
ERGIC3-216ENST00000488384 PIK3R5Q8WYR1 880 aa17.36■□□□□ 0.37
ERGIC3-216ENST00000488384 TTPALQ9BTX7 342 aa17.36■□□□□ 0.37
ERGIC3-216ENST00000488384 EMILIN2Q9BXX0 1053 aa17.36■□□□□ 0.37
ERGIC3-216ENST00000488384 KCTD10Q9H3F6 313 aa17.36■□□□□ 0.37
ERGIC3-216ENST00000488384 RXFP1Q9HBX9 757 aa17.36■□□□□ 0.37
ERGIC3-216ENST00000488384 SSX2IPQ9Y2D8 614 aa17.36■□□□□ 0.37
ERGIC3-216ENST00000488384 PLXNA3P51805 1871 aa17.35■□□□□ 0.37
ERGIC3-216ENST00000488384 TEX28O15482 410 aa17.35■□□□□ 0.37
ERGIC3-216ENST00000488384 KINO60870 393 aaKnown RBP17.35■□□□□ 0.37
ERGIC3-216ENST00000488384 TKTP29401 623 aaKnown RBP17.35■□□□□ 0.37
ERGIC3-216ENST00000488384 CYP2J2P51589 502 aa17.35■□□□□ 0.37
ERGIC3-216ENST00000488384 ERCC4Q92889 916 aaPredicted RBP17.35■□□□□ 0.37
ERGIC3-216ENST00000488384 FAM84AQ96KN4 292 aa17.35■□□□□ 0.37
ERGIC3-216ENST00000488384 CGNQ9P2M7 1197 aaKnown RBP17.35■□□□□ 0.37
ERGIC3-216ENST00000488384 NUB1Q9Y5A7 615 aa17.35■□□□□ 0.37
ERGIC3-216ENST00000488384 ADH1AP07327 375 aa17.34■□□□□ 0.37
ERGIC3-216ENST00000488384 SRGAP2BP0DMP2 458 aa17.34■□□□□ 0.37
ERGIC3-216ENST00000488384 EPCAMP16422 314 aa17.34■□□□□ 0.37
ERGIC3-216ENST00000488384 MCM4P33991 863 aa17.34■□□□□ 0.37
ERGIC3-216ENST00000488384 UBE2HP62256 183 aa17.34■□□□□ 0.37
ERGIC3-216ENST00000488384 PSMD5Q16401 504 aa17.34■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms