RNA–Protein interactions for RNA: ENST00000488255.1

VPS8-224, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 2

Gene VPS8, Length 564 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-224ENST00000488255 PPFIA4O75335 1185 aa6.24□□□□□ -1.41
VPS8-224ENST00000488255 ERN1O75460 977 aaKnown RBP6.24□□□□□ -1.41
VPS8-224ENST00000488255 ZRANB2O95218 330 aaKnown RBP eCLIP6.24□□□□□ -1.41
VPS8-224ENST00000488255 IL33O95760 270 aa6.24□□□□□ -1.41
VPS8-224ENST00000488255 ELANEP08246 267 aa6.24□□□□□ -1.41
VPS8-224ENST00000488255 KRT4P19013 534 aa6.24□□□□□ -1.41
VPS8-224ENST00000488255 FGFR4P22455 802 aa6.24□□□□□ -1.41
VPS8-224ENST00000488255 RECQLP46063 649 aaPredicted RBP6.24□□□□□ -1.41
VPS8-224ENST00000488255 ADKP55263 362 aaKnown RBP6.24□□□□□ -1.41
VPS8-224ENST00000488255 NOMO3P69849 1222 aa6.24□□□□□ -1.41
VPS8-224ENST00000488255 IGBP1P78318 339 aa6.24□□□□□ -1.41
VPS8-224ENST00000488255 KRT85P78386 507 aa6.24□□□□□ -1.41
VPS8-224ENST00000488255 DPTQ07507 201 aa6.24□□□□□ -1.41
VPS8-224ENST00000488255 SPDYE7PQ495Y7 208 aa6.24□□□□□ -1.41
VPS8-224ENST00000488255 NOMO2Q5JPE7 1267 aa6.24□□□□□ -1.41
VPS8-224ENST00000488255 PPP4R3AQ6IN85 833 aa6.24□□□□□ -1.41
VPS8-224ENST00000488255 LDLRAD3Q86YD5 345 aa6.24□□□□□ -1.41
VPS8-224ENST00000488255 CMTR2Q8IYT2 770 aaKnown RBP6.24□□□□□ -1.41
VPS8-224ENST00000488255 ULK2Q8IYT8 1036 aa6.24□□□□□ -1.41
VPS8-224ENST00000488255 LCORLQ8N3X6 602 aa6.24□□□□□ -1.41
VPS8-224ENST00000488255 IFI44Q8TCB0 444 aa6.24□□□□□ -1.41
VPS8-224ENST00000488255 ADAM2Q99965 735 aa6.24□□□□□ -1.41
VPS8-224ENST00000488255 VRK1Q99986 396 aaPredicted RBP6.24□□□□□ -1.41
VPS8-224ENST00000488255 ALOXE3Q9BYJ1 711 aa6.24□□□□□ -1.41
VPS8-224ENST00000488255 RNPEPQ9H4A4 650 aa6.24□□□□□ -1.41
VPS8-224ENST00000488255 SERHL2Q9H4I8 314 aa6.24□□□□□ -1.41
VPS8-224ENST00000488255 CYP4F11Q9HBI6 524 aa6.24□□□□□ -1.41
VPS8-224ENST00000488255 AASDHPPTQ9NRN7 309 aa6.24□□□□□ -1.41
VPS8-224ENST00000488255 MTO1Q9Y2Z2 717 aaKnown RBP6.24□□□□□ -1.41
VPS8-224ENST00000488255 SPEF1Q9Y4P9 236 aa6.24□□□□□ -1.41
VPS8-224ENST00000488255 NOX1Q9Y5S8 564 aa6.24□□□□□ -1.41
VPS8-224ENST00000488255 HS3ST4Q9Y661 456 aa6.24□□□□□ -1.41
VPS8-224ENST00000488255 TMEM191CA6NGB0 347 aa6.23□□□□□ -1.41
VPS8-224ENST00000488255 SPDEFO95238 335 aa6.23□□□□□ -1.41
VPS8-224ENST00000488255 GPANK1O95872 356 aa6.23□□□□□ -1.41
VPS8-224ENST00000488255 CFIP05156 583 aa6.23□□□□□ -1.41
VPS8-224ENST00000488255 CD1AP06126 327 aa6.23□□□□□ -1.41
VPS8-224ENST00000488255 CKBP12277 381 aa6.23□□□□□ -1.41
VPS8-224ENST00000488255 INHBCP55103 352 aa6.23□□□□□ -1.41
VPS8-224ENST00000488255 OCA2Q04671 838 aa6.23□□□□□ -1.41
VPS8-224ENST00000488255 FOXR2Q6PJQ5 311 aa6.23□□□□□ -1.41
VPS8-224ENST00000488255 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP6.23□□□□□ -1.41
VPS8-224ENST00000488255 Q6ZPA2 131 aa6.23□□□□□ -1.41
VPS8-224ENST00000488255 MRGPRGQ86SM5 289 aa6.23□□□□□ -1.41
VPS8-224ENST00000488255 TMEM132CQ8N3T6 1108 aa6.23□□□□□ -1.41
VPS8-224ENST00000488255 NIPSNAP3AQ9UFN0 247 aaPredicted RBP6.23□□□□□ -1.41
VPS8-224ENST00000488255 SHROOM4Q9ULL8 1493 aa6.22□□□□□ -1.41
VPS8-224ENST00000488255 LRRC14BA6NHZ5 514 aa6.22□□□□□ -1.41
VPS8-224ENST00000488255 CDKL5O76039 1030 aa6.22□□□□□ -1.41
VPS8-224ENST00000488255 MTHFD1P11586 935 aaKnown RBP6.22□□□□□ -1.41
VPS8-224ENST00000488255 GCSHP23434 173 aa6.22□□□□□ -1.41
VPS8-224ENST00000488255 SLC6A4P31645 630 aa6.22□□□□□ -1.41
VPS8-224ENST00000488255 ZEB1P37275 1124 aaPredicted RBP6.22□□□□□ -1.41
VPS8-224ENST00000488255 EXOSC10Q01780 885 aaKnown RBP6.22□□□□□ -1.41
VPS8-224ENST00000488255 KHDC1Q4VXA5 237 aaKnown RBP6.22□□□□□ -1.41
VPS8-224ENST00000488255 UTP14CQ5TAP6 766 aaKnown RBP6.22□□□□□ -1.41
VPS8-224ENST00000488255 CATIPQ7Z7H3 387 aa6.22□□□□□ -1.41
VPS8-224ENST00000488255 AMER2Q8N7J2 671 aa6.22□□□□□ -1.41
VPS8-224ENST00000488255 CHMP4CQ96CF2 233 aa6.22□□□□□ -1.41
VPS8-224ENST00000488255 MRGPRX4Q96LA9 322 aa6.22□□□□□ -1.41
VPS8-224ENST00000488255 CEP89Q96ST8 783 aa6.22□□□□□ -1.41
VPS8-224ENST00000488255 PACSIN1Q9BY11 444 aa6.22□□□□□ -1.41
VPS8-224ENST00000488255 TESQ9UGI8 421 aaKnown RBP6.22□□□□□ -1.41
VPS8-224ENST00000488255 IP6K2Q9UHH9 426 aa6.22□□□□□ -1.41
VPS8-224ENST00000488255 WDR33Q9C0J8 1336 aaKnown RBP6.22□□□□□ -1.41
VPS8-224ENST00000488255 FOXN1O15353 648 aa6.21□□□□□ -1.42
VPS8-224ENST00000488255 SGTAO43765 313 aa6.21□□□□□ -1.42
VPS8-224ENST00000488255 HAUS5O94927 633 aa6.21□□□□□ -1.42
VPS8-224ENST00000488255 AGFG2O95081 481 aa6.21□□□□□ -1.42
VPS8-224ENST00000488255 RPLP2P05387 115 aaKnown RBP6.21□□□□□ -1.42
VPS8-224ENST00000488255 ITGAMP11215 1152 aa6.21□□□□□ -1.42
VPS8-224ENST00000488255 BMPR1AP36894 532 aa6.21□□□□□ -1.42
VPS8-224ENST00000488255 NEK2P51955 445 aa6.21□□□□□ -1.42
VPS8-224ENST00000488255 CXADRP78310 365 aa6.21□□□□□ -1.42
VPS8-224ENST00000488255 TLE1Q04724 770 aa6.21□□□□□ -1.42
VPS8-224ENST00000488255 RAB39AQ14964 217 aa6.21□□□□□ -1.42
VPS8-224ENST00000488255 PABPC1LQ4VXU2 614 aaKnown RBP6.21□□□□□ -1.42
VPS8-224ENST00000488255 DACT2Q5SW24 774 aa6.21□□□□□ -1.42
VPS8-224ENST00000488255 B3GNTL1Q67FW5 361 aaPredicted RBP6.21□□□□□ -1.42
VPS8-224ENST00000488255 TTC7BQ86TV6 843 aa6.21□□□□□ -1.42
VPS8-224ENST00000488255 ARHGEF19Q8IW93 802 aa6.21□□□□□ -1.42
VPS8-224ENST00000488255 NLGN4YQ8NFZ3 816 aaPredicted RBP6.21□□□□□ -1.42
VPS8-224ENST00000488255 ASB10Q8WXI3 467 aa6.21□□□□□ -1.42
VPS8-224ENST00000488255 PRRX2Q99811 253 aa6.21□□□□□ -1.42
VPS8-224ENST00000488255 SLC45A2Q9UMX9 530 aa6.21□□□□□ -1.42
VPS8-224ENST00000488255 CDYLQ9Y232 598 aa6.21□□□□□ -1.42
VPS8-224ENST00000488255 B3GALT2O43825 422 aa6.2□□□□□ -1.42
VPS8-224ENST00000488255 FOSP01100 380 aaPredicted RBP6.2□□□□□ -1.42
VPS8-224ENST00000488255 CT47B1P0C2W7 299 aaPredicted RBP6.2□□□□□ -1.42
VPS8-224ENST00000488255 PDCP20941 246 aa6.2□□□□□ -1.42
VPS8-224ENST00000488255 SMARCA1P28370 1054 aa6.2□□□□□ -1.42
VPS8-224ENST00000488255 USP14P54578 494 aa6.2□□□□□ -1.42
VPS8-224ENST00000488255 CPA6Q8N4T0 437 aa6.2□□□□□ -1.42
VPS8-224ENST00000488255 BEND2Q8NDZ0 799 aa6.2□□□□□ -1.42
VPS8-224ENST00000488255 CAVIN3Q969G5 261 aa6.2□□□□□ -1.42
VPS8-224ENST00000488255 HOOK2Q96ED9 719 aa6.2□□□□□ -1.42
VPS8-224ENST00000488255 HSPBAP1Q96EW2 488 aa6.2□□□□□ -1.42
VPS8-224ENST00000488255 DMRTA2Q96SC8 542 aa6.2□□□□□ -1.42
VPS8-224ENST00000488255 PNKPQ96T60 521 aa6.2□□□□□ -1.42
VPS8-224ENST00000488255 TLR10Q9BXR5 811 aa6.2□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms