RNA–Protein interactions for RNA: ENST00000488228.1

UBE4B-210, Transcript of ubiquitination factor E4B, humanhuman

TSL 3

Gene UBE4B, Length 560 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-210ENST00000488228 CD302Q8IX05 232 aa11.97□□□□□ -0.49
UBE4B-210ENST00000488228 MICALL1Q8N3F8 863 aa11.97□□□□□ -0.49
UBE4B-210ENST00000488228 OR5B17Q8NGF7 314 aa11.97□□□□□ -0.49
UBE4B-210ENST00000488228 SPPL3Q8TCT6 385 aa11.97□□□□□ -0.49
UBE4B-210ENST00000488228 POF1BQ8WVV4 589 aa11.97□□□□□ -0.49
UBE4B-210ENST00000488228 DHTKD1Q96HY7 919 aaPredicted RBP11.97□□□□□ -0.49
UBE4B-210ENST00000488228 B3GALT6Q96L58 329 aa11.97□□□□□ -0.49
UBE4B-210ENST00000488228 UROC1Q96N76 676 aa11.97□□□□□ -0.49
UBE4B-210ENST00000488228 GAS2L1Q99501 681 aaPredicted RBP11.97□□□□□ -0.49
UBE4B-210ENST00000488228 CGRRF1Q99675 332 aa11.97□□□□□ -0.49
UBE4B-210ENST00000488228 ASB7Q9H672 318 aa11.97□□□□□ -0.49
UBE4B-210ENST00000488228 KIAA1586Q9HCI6 787 aa11.97□□□□□ -0.49
UBE4B-210ENST00000488228 ADAM28Q9UKQ2 775 aa11.97□□□□□ -0.49
UBE4B-210ENST00000488228 XPOTO43592 962 aaKnown RBP11.96□□□□□ -0.49
UBE4B-210ENST00000488228 ALDH2P05091 517 aa11.96□□□□□ -0.49
UBE4B-210ENST00000488228 TRIM49P0CI25 452 aa11.96□□□□□ -0.49
UBE4B-210ENST00000488228 TRIM49CP0CI26 452 aa11.96□□□□□ -0.49
UBE4B-210ENST00000488228 PTMSP20962 102 aa11.96□□□□□ -0.49
UBE4B-210ENST00000488228 PPP1R2P41236 205 aa11.96□□□□□ -0.49
UBE4B-210ENST00000488228 POU5F1Q01860 360 aaKnown RBP11.96□□□□□ -0.49
UBE4B-210ENST00000488228 PLCB3Q01970 1234 aa11.96□□□□□ -0.49
UBE4B-210ENST00000488228 ADAM9Q13443 819 aa11.96□□□□□ -0.49
UBE4B-210ENST00000488228 PSMD6Q15008 389 aa11.96□□□□□ -0.49
UBE4B-210ENST00000488228 SPATA1Q5VX52 437 aa11.96□□□□□ -0.49
UBE4B-210ENST00000488228 PLPP4Q5VZY2 271 aa11.96□□□□□ -0.49
UBE4B-210ENST00000488228 SCARA3Q6AZY7 606 aa11.96□□□□□ -0.49
UBE4B-210ENST00000488228 FUT10Q6P4F1 479 aa11.96□□□□□ -0.49
UBE4B-210ENST00000488228 CD300LGQ6UXG3 332 aa11.96□□□□□ -0.49
UBE4B-210ENST00000488228 ZC3H3Q8IXZ2 948 aaKnown RBP11.96□□□□□ -0.49
UBE4B-210ENST00000488228 FAM186BQ8IYM0 893 aa11.96□□□□□ -0.49
UBE4B-210ENST00000488228 BEST2Q8NFU1 509 aa11.96□□□□□ -0.49
UBE4B-210ENST00000488228 TMEM174Q8WUU8 243 aa11.96□□□□□ -0.49
UBE4B-210ENST00000488228 AUTS2Q8WXX7 1259 aa11.96□□□□□ -0.49
UBE4B-210ENST00000488228 MFSD14AQ96MC6 490 aa11.96□□□□□ -0.49
UBE4B-210ENST00000488228 MED15Q96RN5 788 aa11.96□□□□□ -0.49
UBE4B-210ENST00000488228 POP1Q99575 1024 aaKnown RBP11.96□□□□□ -0.49
UBE4B-210ENST00000488228 DUSP9Q99956 384 aaKnown RBP11.96□□□□□ -0.49
UBE4B-210ENST00000488228 COLEC11Q9BWP8 271 aa11.96□□□□□ -0.49
UBE4B-210ENST00000488228 GPR62Q9BZJ7 368 aa11.96□□□□□ -0.49
UBE4B-210ENST00000488228 ZBP1Q9H171 429 aa11.96□□□□□ -0.49
UBE4B-210ENST00000488228 ENTPD7Q9NQZ7 604 aa11.96□□□□□ -0.49
UBE4B-210ENST00000488228 TLR9Q9NR96 1032 aa11.96□□□□□ -0.49
UBE4B-210ENST00000488228 INTS13Q9NVM9 706 aa11.96□□□□□ -0.49
UBE4B-210ENST00000488228 FRMD4BQ9Y2L6 1034 aa11.96□□□□□ -0.49
UBE4B-210ENST00000488228 DERAQ9Y315 318 aa11.96□□□□□ -0.49
UBE4B-210ENST00000488228 SF3B1O75533 1304 aaKnown RBP eCLIP11.95□□□□□ -0.5
UBE4B-210ENST00000488228 LRRIQ3A6PVS8 624 aaPredicted RBP11.95□□□□□ -0.5
UBE4B-210ENST00000488228 CETN3O15182 167 aa11.95□□□□□ -0.5
UBE4B-210ENST00000488228 B3GAT3O94766 335 aa11.95□□□□□ -0.5
UBE4B-210ENST00000488228 ITGB3P05106 788 aa11.95□□□□□ -0.5
UBE4B-210ENST00000488228 TMEM191BP0C7N4 346 aa11.95□□□□□ -0.5
UBE4B-210ENST00000488228 TNNI1P19237 187 aa11.95□□□□□ -0.5
UBE4B-210ENST00000488228 CYP3A5P20815 502 aa11.95□□□□□ -0.5
UBE4B-210ENST00000488228 RPL13P26373 211 aaKnown RBP11.95□□□□□ -0.5
UBE4B-210ENST00000488228 LRPAP1P30533 357 aa11.95□□□□□ -0.5
UBE4B-210ENST00000488228 POLR2BP30876 1174 aaKnown RBP11.95□□□□□ -0.5
UBE4B-210ENST00000488228 CA8P35219 290 aa11.95□□□□□ -0.5
UBE4B-210ENST00000488228 BRCC3P46736 316 aa11.95□□□□□ -0.5
UBE4B-210ENST00000488228 ERVFC1P60507 584 aa11.95□□□□□ -0.5
UBE4B-210ENST00000488228 DLG4P78352 724 aa11.95□□□□□ -0.5
UBE4B-210ENST00000488228 KRT17Q04695 432 aa11.95□□□□□ -0.5
UBE4B-210ENST00000488228 UBE3AQ05086 875 aa11.95□□□□□ -0.5
UBE4B-210ENST00000488228 MYBPC2Q14324 1141 aa11.95□□□□□ -0.5
UBE4B-210ENST00000488228 NFKBIBQ15653 356 aa11.95□□□□□ -0.5
UBE4B-210ENST00000488228 C9orf57Q5W0N0 161 aa11.95□□□□□ -0.5
UBE4B-210ENST00000488228 C11orf57Q6ZUT1 292 aaPredicted RBP11.95□□□□□ -0.5
UBE4B-210ENST00000488228 DDX53Q86TM3 631 aaKnown RBP11.95□□□□□ -0.5
UBE4B-210ENST00000488228 WDR49Q8IV35 697 aa11.95□□□□□ -0.5
UBE4B-210ENST00000488228 VPS52Q8N1B4 723 aa11.95□□□□□ -0.5
UBE4B-210ENST00000488228 C1orf127Q8N9H9 656 aa11.95□□□□□ -0.5
UBE4B-210ENST00000488228 MLKLQ8NB16 471 aa11.95□□□□□ -0.5
UBE4B-210ENST00000488228 SYAP1Q96A49 352 aaPredicted RBP11.95□□□□□ -0.5
UBE4B-210ENST00000488228 MRPL38Q96DV4 380 aaKnown RBP11.95□□□□□ -0.5
UBE4B-210ENST00000488228 FNBP1Q96RU3 617 aa11.95□□□□□ -0.5
UBE4B-210ENST00000488228 TSPAN18Q96SJ8 248 aa11.95□□□□□ -0.5
UBE4B-210ENST00000488228 TCF25Q9BQ70 676 aa11.95□□□□□ -0.5
UBE4B-210ENST00000488228 HERC2P3Q9BVR0 1158 aa11.95□□□□□ -0.5
UBE4B-210ENST00000488228 DPP3Q9NY33 737 aa11.95□□□□□ -0.5
UBE4B-210ENST00000488228 LZTS1Q9Y250 596 aa11.95□□□□□ -0.5
UBE4B-210ENST00000488228 MTCH2Q9Y6C9 303 aa11.95□□□□□ -0.5
UBE4B-210ENST00000488228 MTCL1Q9Y4B5 1905 aaKnown RBP11.94□□□□□ -0.5
UBE4B-210ENST00000488228 BICDL2A1A5D9 508 aa11.94□□□□□ -0.5
UBE4B-210ENST00000488228 CARNS1A5YM72 827 aa11.94□□□□□ -0.5
UBE4B-210ENST00000488228 TMEM189-UBE2V1I3L0A0 370 aa11.94□□□□□ -0.5
UBE4B-210ENST00000488228 C2CD2LO14523 706 aa11.94□□□□□ -0.5
UBE4B-210ENST00000488228 FSCN2O14926 492 aa11.94□□□□□ -0.5
UBE4B-210ENST00000488228 SLC16A3O15427 465 aaKnown RBP11.94□□□□□ -0.5
UBE4B-210ENST00000488228 TADA2AO75478 443 aa11.94□□□□□ -0.5
UBE4B-210ENST00000488228 EFEMP2O95967 443 aa11.94□□□□□ -0.5
UBE4B-210ENST00000488228 KRT19P08727 400 aa11.94□□□□□ -0.5
UBE4B-210ENST00000488228 EPB41P11171 864 aaKnown RBP11.94□□□□□ -0.5
UBE4B-210ENST00000488228 RPL9P32969 192 aaKnown RBP11.94□□□□□ -0.5
UBE4B-210ENST00000488228 PSMC2P35998 433 aaKnown RBP11.94□□□□□ -0.5
UBE4B-210ENST00000488228 SURF1Q15526 300 aa11.94□□□□□ -0.5
UBE4B-210ENST00000488228 PTPN14Q15678 1187 aa11.94□□□□□ -0.5
UBE4B-210ENST00000488228 STX1AQ16623 288 aa11.94□□□□□ -0.5
UBE4B-210ENST00000488228 PTPROQ16827 1216 aa11.94□□□□□ -0.5
UBE4B-210ENST00000488228 TIGD5Q53EQ6 642 aa11.94□□□□□ -0.5
UBE4B-210ENST00000488228 RTP2Q5QGT7 225 aa11.94□□□□□ -0.5
UBE4B-210ENST00000488228 C1orf220Q5T0J3 134 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms