RNA–Protein interactions for RNA: ENST00000488111.1

COPS7B-221, Transcript of COP9 signalosome subunit 7B, humanhuman

TSL 1 (best)

Gene COPS7B, Length 2,381 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7B-221ENST00000488111 RNF149Q8NC42 400 aa14.71□□□□□ -0.05
COPS7B-221ENST00000488111 MS4A14Q96JA4 679 aa14.71□□□□□ -0.05
COPS7B-221ENST00000488111 NLRP4Q96MN2 994 aa14.71□□□□□ -0.05
COPS7B-221ENST00000488111 UPF3AQ9H1J1 476 aaKnown RBP14.71□□□□□ -0.05
COPS7B-221ENST00000488111 ST6GALNAC4Q9H4F1 302 aa14.71□□□□□ -0.05
COPS7B-221ENST00000488111 SALL4Q9UJQ4 1053 aa14.71□□□□□ -0.05
COPS7B-221ENST00000488111 DNAH12Q6ZR08 3092 aa14.71□□□□□ -0.05
COPS7B-221ENST00000488111 GRID2IPA4D2P6 1211 aa14.71□□□□□ -0.05
COPS7B-221ENST00000488111 H0YGN5 161 aa14.71□□□□□ -0.05
COPS7B-221ENST00000488111 HAS3O00219 553 aa14.71□□□□□ -0.05
COPS7B-221ENST00000488111 VTNP04004 478 aa14.71□□□□□ -0.05
COPS7B-221ENST00000488111 NR3C1P04150 777 aa14.71□□□□□ -0.05
COPS7B-221ENST00000488111 IBSPP21815 317 aaPredicted RBP14.71□□□□□ -0.05
COPS7B-221ENST00000488111 EIF4A3P38919 411 aaKnown RBP14.71□□□□□ -0.05
COPS7B-221ENST00000488111 NAMPTP43490 491 aa14.71□□□□□ -0.05
COPS7B-221ENST00000488111 PRMT2P55345 433 aa14.71□□□□□ -0.05
COPS7B-221ENST00000488111 GRIK3Q13003 919 aa14.71□□□□□ -0.05
COPS7B-221ENST00000488111 E2F5Q15329 346 aa14.71□□□□□ -0.05
COPS7B-221ENST00000488111 KCNA10Q16322 511 aa14.71□□□□□ -0.05
COPS7B-221ENST00000488111 MAATS1Q7Z4T9 603 aa14.71□□□□□ -0.05
COPS7B-221ENST00000488111 EXOC8Q8IYI6 725 aa14.71□□□□□ -0.05
COPS7B-221ENST00000488111 EIF1ADQ8N9N8 165 aaKnown RBP14.71□□□□□ -0.05
COPS7B-221ENST00000488111 PCMTD1Q96MG8 357 aaPredicted RBP14.71□□□□□ -0.05
COPS7B-221ENST00000488111 HMX1Q9NP08 348 aaPredicted RBP14.71□□□□□ -0.05
COPS7B-221ENST00000488111 ARHGAP28Q9P2N2 729 aa14.71□□□□□ -0.05
COPS7B-221ENST00000488111 NFS1Q9Y697 457 aa14.71□□□□□ -0.05
COPS7B-221ENST00000488111 GOLGA6L10A6NI86 522 aa14.7□□□□□ -0.06
COPS7B-221ENST00000488111 MAGEB2O15479 319 aa14.7□□□□□ -0.06
COPS7B-221ENST00000488111 ASGR1P07306 291 aa14.7□□□□□ -0.06
COPS7B-221ENST00000488111 HPDP32754 393 aaPredicted RBP14.7□□□□□ -0.06
COPS7B-221ENST00000488111 ALCAMQ13740 583 aa14.7□□□□□ -0.06
COPS7B-221ENST00000488111 EDRF1Q3B7T1 1238 aa14.7□□□□□ -0.06
COPS7B-221ENST00000488111 NAIF1Q69YI7 327 aaPredicted RBP14.7□□□□□ -0.06
COPS7B-221ENST00000488111 HS2ST1Q7LGA3 356 aa14.7□□□□□ -0.06
COPS7B-221ENST00000488111 EGFL6Q8IUX8 553 aa14.7□□□□□ -0.06
COPS7B-221ENST00000488111 FAM114A1Q8IWE2 563 aa14.7□□□□□ -0.06
COPS7B-221ENST00000488111 CACNA2D3Q8IZS8 1091 aa14.7□□□□□ -0.06
COPS7B-221ENST00000488111 RNF10Q8N5U6 811 aaKnown RBP14.7□□□□□ -0.06
COPS7B-221ENST00000488111 KDM4CQ9H3R0 1056 aa14.7□□□□□ -0.06
COPS7B-221ENST00000488111 PCIF1Q9H4Z3 704 aa14.7□□□□□ -0.06
COPS7B-221ENST00000488111 TMEM206Q9H813 350 aa14.7□□□□□ -0.06
COPS7B-221ENST00000488111 SLC24A3Q9HC58 644 aa14.7□□□□□ -0.06
COPS7B-221ENST00000488111 AGPAT3Q9NRZ7 376 aa14.7□□□□□ -0.06
COPS7B-221ENST00000488111 AKT3Q9Y243 479 aa14.7□□□□□ -0.06
COPS7B-221ENST00000488111 UBE4BO95155 1302 aa14.7□□□□□ -0.06
COPS7B-221ENST00000488111 COL1A2P08123 1366 aa14.7□□□□□ -0.06
COPS7B-221ENST00000488111 ANKRD63C9JTQ0 380 aa14.7□□□□□ -0.06
COPS7B-221ENST00000488111 GAS2O43903 313 aaKnown RBP14.7□□□□□ -0.06
COPS7B-221ENST00000488111 MYZAPP0CAP1 466 aa14.7□□□□□ -0.06
COPS7B-221ENST00000488111 MTIF2P46199 727 aaKnown RBP14.7□□□□□ -0.06
COPS7B-221ENST00000488111 CASP4P49662 377 aa14.7□□□□□ -0.06
COPS7B-221ENST00000488111 CYP2J2P51589 502 aa14.7□□□□□ -0.06
COPS7B-221ENST00000488111 ZKSCAN8Q15776 578 aaPredicted RBP14.7□□□□□ -0.06
COPS7B-221ENST00000488111 PPP4R3CPQ6ZMV5 832 aa14.7□□□□□ -0.06
COPS7B-221ENST00000488111 SLC17A8Q8NDX2 589 aa14.7□□□□□ -0.06
COPS7B-221ENST00000488111 CCT6BQ92526 530 aa14.7□□□□□ -0.06
COPS7B-221ENST00000488111 TATDN2Q93075 761 aa14.7□□□□□ -0.06
COPS7B-221ENST00000488111 NOX5Q96PH1 765 aa14.7□□□□□ -0.06
COPS7B-221ENST00000488111 MTG1Q9BT17 334 aaPredicted RBP14.7□□□□□ -0.06
COPS7B-221ENST00000488111 FAM49AQ9H0Q0 323 aaPredicted RBP14.7□□□□□ -0.06
COPS7B-221ENST00000488111 PTPN22Q9Y2R2 807 aa14.7□□□□□ -0.06
COPS7B-221ENST00000488111 NRCAMQ92823 1304 aa14.7□□□□□ -0.06
COPS7B-221ENST00000488111 K7ERI5 159 aa14.69□□□□□ -0.06
COPS7B-221ENST00000488111 CETN3O15182 167 aa14.69□□□□□ -0.06
COPS7B-221ENST00000488111 CSDE1O75534 798 aaKnown RBP14.69□□□□□ -0.06
COPS7B-221ENST00000488111 ATP6V1G2O95670 118 aa14.69□□□□□ -0.06
COPS7B-221ENST00000488111 MAGEA1P43355 309 aa14.69□□□□□ -0.06
COPS7B-221ENST00000488111 TMEM62Q0P6H9 643 aa14.69□□□□□ -0.06
COPS7B-221ENST00000488111 BIRC3Q13489 604 aa14.69□□□□□ -0.06
COPS7B-221ENST00000488111 MXD4Q14582 209 aaPredicted RBP14.69□□□□□ -0.06
COPS7B-221ENST00000488111 MAP4K3Q8IVH8 894 aa14.69□□□□□ -0.06
COPS7B-221ENST00000488111 LINC01465Q8N7H1 131 aa14.69□□□□□ -0.06
COPS7B-221ENST00000488111 C7orf31Q8N865 590 aa14.69□□□□□ -0.06
COPS7B-221ENST00000488111 KLHDC9Q8NEP7 349 aa14.69□□□□□ -0.06
COPS7B-221ENST00000488111 CBWD1Q9BRT8 395 aa14.69□□□□□ -0.06
COPS7B-221ENST00000488111 NOC4LQ9BVI4 516 aaKnown RBP14.69□□□□□ -0.06
COPS7B-221ENST00000488111 KATNAL1Q9BW62 490 aa14.69□□□□□ -0.06
COPS7B-221ENST00000488111 RRN3P2A6NIE6 340 aa14.69□□□□□ -0.06
COPS7B-221ENST00000488111 TREHO43280 583 aa14.69□□□□□ -0.06
COPS7B-221ENST00000488111 FGFR1OPO95684 399 aaKnown RBP14.69□□□□□ -0.06
COPS7B-221ENST00000488111 TMOD1P28289 359 aa14.69□□□□□ -0.06
COPS7B-221ENST00000488111 GBP2P32456 591 aaPredicted RBP14.69□□□□□ -0.06
COPS7B-221ENST00000488111 ELF3P78545 371 aaPredicted RBP14.69□□□□□ -0.06
COPS7B-221ENST00000488111 NBPF20Q3BBV1 942 aa14.69□□□□□ -0.06
COPS7B-221ENST00000488111 AGBL2Q5U5Z8 902 aa14.69□□□□□ -0.06
COPS7B-221ENST00000488111 RDH13Q8NBN7 331 aa14.69□□□□□ -0.06
COPS7B-221ENST00000488111 ZSWIM2Q8NEG5 633 aa14.69□□□□□ -0.06
COPS7B-221ENST00000488111 BICD1Q96G01 975 aa14.69□□□□□ -0.06
COPS7B-221ENST00000488111 EBF2Q9HAK2 575 aa14.69□□□□□ -0.06
COPS7B-221ENST00000488111 SIK3Q9Y2K2 1263 aa14.69□□□□□ -0.06
COPS7B-221ENST00000488111 AKR1B10O60218 316 aa14.68□□□□□ -0.06
COPS7B-221ENST00000488111 KPNA6O60684 536 aa14.68□□□□□ -0.06
COPS7B-221ENST00000488111 AKAP3O75969 853 aa14.68□□□□□ -0.06
COPS7B-221ENST00000488111 EDN1P05305 212 aa14.68□□□□□ -0.06
COPS7B-221ENST00000488111 HSD17B3P37058 310 aa14.68□□□□□ -0.06
COPS7B-221ENST00000488111 ASTE1Q2TB18 679 aaPredicted RBP14.68□□□□□ -0.06
COPS7B-221ENST00000488111 FAM47CQ5HY64 1035 aa14.68□□□□□ -0.06
COPS7B-221ENST00000488111 LHX8Q68G74 356 aa14.68□□□□□ -0.06
COPS7B-221ENST00000488111 CCSAPQ6IQ19 270 aaPredicted RBP14.68□□□□□ -0.06
COPS7B-221ENST00000488111 FOXR2Q6PJQ5 311 aa14.68□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms