RNA–Protein interactions for RNA: ENST00000487739.1

CCDC66-221, Transcript of coiled-coil domain containing 66, humanhuman

TSL 3

Gene CCDC66, Length 443 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66-221ENST00000487739 USP35Q9P2H5 1018 aa5.49□□□□□ -1.53
CCDC66-221ENST00000487739 DNM3Q9UQ16 869 aa5.49□□□□□ -1.53
CCDC66-221ENST00000487739 DMTF1Q9Y222 760 aa5.49□□□□□ -1.53
CCDC66-221ENST00000487739 RUVBL1Q9Y265 456 aaKnown RBP5.49□□□□□ -1.53
CCDC66-221ENST00000487739 AATKQ6ZMQ8 1374 aa5.49□□□□□ -1.53
CCDC66-221ENST00000487739 WASHC2AQ641Q2 1341 aa5.48□□□□□ -1.53
CCDC66-221ENST00000487739 CLSTN1O94985 981 aa5.48□□□□□ -1.53
CCDC66-221ENST00000487739 PRSS23O95084 383 aa5.48□□□□□ -1.53
CCDC66-221ENST00000487739 C1RP00736 705 aa5.48□□□□□ -1.53
CCDC66-221ENST00000487739 ZNF37AP17032 561 aaPredicted RBP5.48□□□□□ -1.53
CCDC66-221ENST00000487739 VAV2P52735 878 aa5.48□□□□□ -1.53
CCDC66-221ENST00000487739 MTM1Q13496 603 aa5.48□□□□□ -1.53
CCDC66-221ENST00000487739 CYP2A13Q16696 494 aa5.48□□□□□ -1.53
CCDC66-221ENST00000487739 ATP2B3Q16720 1220 aa5.48□□□□□ -1.53
CCDC66-221ENST00000487739 COLEC12Q5KU26 742 aa5.48□□□□□ -1.53
CCDC66-221ENST00000487739 LHFPL2Q6ZUX7 228 aa5.48□□□□□ -1.53
CCDC66-221ENST00000487739 KRT26Q7Z3Y9 468 aa5.48□□□□□ -1.53
CCDC66-221ENST00000487739 COLGALT2Q8IYK4 626 aa5.48□□□□□ -1.53
CCDC66-221ENST00000487739 FITM2Q8N6M3 262 aa5.48□□□□□ -1.53
CCDC66-221ENST00000487739 NUP133Q8WUM0 1156 aa5.48□□□□□ -1.53
CCDC66-221ENST00000487739 MED15Q96RN5 788 aa5.48□□□□□ -1.53
CCDC66-221ENST00000487739 KIAA1586Q9HCI6 787 aa5.48□□□□□ -1.53
CCDC66-221ENST00000487739 ALG13Q9NP73 1137 aaKnown RBP5.48□□□□□ -1.53
CCDC66-221ENST00000487739 LRIT1Q9P2V4 623 aa5.48□□□□□ -1.53
CCDC66-221ENST00000487739 GPR45Q9Y5Y3 372 aa5.48□□□□□ -1.53
CCDC66-221ENST00000487739 CCDC78A2IDD5 438 aa5.47□□□□□ -1.53
CCDC66-221ENST00000487739 MYADML2A6NDP7 307 aa5.47□□□□□ -1.53
CCDC66-221ENST00000487739 VIL1P09327 827 aaKnown RBP5.47□□□□□ -1.53
CCDC66-221ENST00000487739 PTH2RP49190 550 aa5.47□□□□□ -1.53
CCDC66-221ENST00000487739 SIM1P81133 766 aaPredicted RBP5.47□□□□□ -1.53
CCDC66-221ENST00000487739 MRPS35P82673 323 aaKnown RBP5.47□□□□□ -1.53
CCDC66-221ENST00000487739 CREMQ03060 361 aa5.47□□□□□ -1.53
CCDC66-221ENST00000487739 RNF219Q5W0B1 726 aaPredicted RBP5.47□□□□□ -1.53
CCDC66-221ENST00000487739 ZKSCAN2Q63HK3 967 aa5.47□□□□□ -1.53
CCDC66-221ENST00000487739 GIMAP6Q6P9H5 292 aa5.47□□□□□ -1.53
CCDC66-221ENST00000487739 FAM98AQ8NCA5 519 aaKnown RBP5.47□□□□□ -1.53
CCDC66-221ENST00000487739 ACTRT2Q8TDY3 377 aa5.47□□□□□ -1.53
CCDC66-221ENST00000487739 NACC2Q96BF6 587 aa5.47□□□□□ -1.53
CCDC66-221ENST00000487739 PTCD3Q96EY7 689 aaKnown RBP5.47□□□□□ -1.53
CCDC66-221ENST00000487739 PNKPQ96T60 521 aa5.47□□□□□ -1.53
CCDC66-221ENST00000487739 C7orf25Q9BPX7 421 aa5.47□□□□□ -1.53
CCDC66-221ENST00000487739 AIFM2Q9BRQ8 373 aa5.47□□□□□ -1.53
CCDC66-221ENST00000487739 LRFN3Q9BTN0 628 aa5.47□□□□□ -1.53
CCDC66-221ENST00000487739 SPATA5L1Q9BVQ7 753 aa5.47□□□□□ -1.53
CCDC66-221ENST00000487739 UNKLQ9H9P5 680 aaKnown RBP5.47□□□□□ -1.53
CCDC66-221ENST00000487739 SALL3Q9BXA9 1300 aa5.47□□□□□ -1.53
CCDC66-221ENST00000487739 CDHR4A6H8M9 788 aa5.46□□□□□ -1.54
CCDC66-221ENST00000487739 K7ESF4 209 aa5.46□□□□□ -1.54
CCDC66-221ENST00000487739 AMY1AP04745 511 aa5.46□□□□□ -1.54
CCDC66-221ENST00000487739 DDCP20711 480 aa5.46□□□□□ -1.54
CCDC66-221ENST00000487739 AGXTP21549 392 aa5.46□□□□□ -1.54
CCDC66-221ENST00000487739 ERVK-21P61565 698 aa5.46□□□□□ -1.54
CCDC66-221ENST00000487739 AMOTL1Q8IY63 956 aa5.46□□□□□ -1.54
CCDC66-221ENST00000487739 OR2I1PQ8NGU4 316 aa5.46□□□□□ -1.54
CCDC66-221ENST00000487739 COG1Q8WTW3 980 aa5.46□□□□□ -1.54
CCDC66-221ENST00000487739 MARS2Q96GW9 593 aaKnown RBP5.46□□□□□ -1.54
CCDC66-221ENST00000487739 ZNF277Q9NRM2 450 aaPredicted RBP5.46□□□□□ -1.54
CCDC66-221ENST00000487739 KCTD5Q9NXV2 234 aa5.46□□□□□ -1.54
CCDC66-221ENST00000487739 MYBBP1AQ9BQG0 1328 aaKnown RBP5.46□□□□□ -1.54
CCDC66-221ENST00000487739 TCRBV7S2A1N4TA0A589 114 aa5.45□□□□□ -1.54
CCDC66-221ENST00000487739 KIAA0391O15091 583 aaKnown RBP5.45□□□□□ -1.54
CCDC66-221ENST00000487739 RARRES1P49788 294 aa5.45□□□□□ -1.54
CCDC66-221ENST00000487739 NOMO3P69849 1222 aa5.45□□□□□ -1.54
CCDC66-221ENST00000487739 ATP8B2P98198 1209 aa5.45□□□□□ -1.54
CCDC66-221ENST00000487739 GEN1Q17RS7 908 aa5.45□□□□□ -1.54
CCDC66-221ENST00000487739 NOMO2Q5JPE7 1267 aa5.45□□□□□ -1.54
CCDC66-221ENST00000487739 DACT2Q5SW24 774 aa5.45□□□□□ -1.54
CCDC66-221ENST00000487739 LNX2Q8N448 690 aa5.45□□□□□ -1.54
CCDC66-221ENST00000487739 ZGPATQ8N5A5 531 aaKnown RBP5.45□□□□□ -1.54
CCDC66-221ENST00000487739 ABCF1Q8NE71 845 aaKnown RBP eCLIP5.45□□□□□ -1.54
CCDC66-221ENST00000487739 NLGN4YQ8NFZ3 816 aaPredicted RBP5.45□□□□□ -1.54
CCDC66-221ENST00000487739 ATL2Q8NHH9 583 aa5.45□□□□□ -1.54
CCDC66-221ENST00000487739 TBC1D15Q8TC07 691 aa5.45□□□□□ -1.54
CCDC66-221ENST00000487739 SSH1Q8WYL5 1049 aa5.45□□□□□ -1.54
CCDC66-221ENST00000487739 HEPHQ9BQS7 1158 aa5.45□□□□□ -1.54
CCDC66-221ENST00000487739 C11orf54Q9H0W9 315 aaPredicted RBP5.45□□□□□ -1.54
CCDC66-221ENST00000487739 GSTO2Q9H4Y5 243 aa5.45□□□□□ -1.54
CCDC66-221ENST00000487739 FOXJ2Q9P0K8 574 aa5.45□□□□□ -1.54
CCDC66-221ENST00000487739 TRGV11A0A075B6L2 103 aa5.44□□□□□ -1.54
CCDC66-221ENST00000487739 HAUS5O94927 633 aa5.44□□□□□ -1.54
CCDC66-221ENST00000487739 IGLV2-14P01704 120 aa5.44□□□□□ -1.54
CCDC66-221ENST00000487739 CACNA2D1P54289 1103 aa5.44□□□□□ -1.54
CCDC66-221ENST00000487739 KLF1Q13351 362 aaPredicted RBP5.44□□□□□ -1.54
CCDC66-221ENST00000487739 ZNF362Q5T0B9 420 aaPredicted RBP5.44□□□□□ -1.54
CCDC66-221ENST00000487739 SSH3Q8TE77 659 aa5.44□□□□□ -1.54
CCDC66-221ENST00000487739 PDLIM2Q96JY6 352 aa5.44□□□□□ -1.54
CCDC66-221ENST00000487739 SLC2A13Q96QE2 648 aa5.44□□□□□ -1.54
CCDC66-221ENST00000487739 TMX1Q9H3N1 280 aa5.44□□□□□ -1.54
CCDC66-221ENST00000487739 HSFX1Q9UBD0 423 aa5.44□□□□□ -1.54
CCDC66-221ENST00000487739 SAP30BPQ9UHR5 308 aaKnown RBP5.44□□□□□ -1.54
CCDC66-221ENST00000487739 TRIM75PA6NK02 468 aa5.43□□□□□ -1.54
CCDC66-221ENST00000487739 MGST3O14880 152 aa5.43□□□□□ -1.54
CCDC66-221ENST00000487739 PEX1O43933 1283 aa5.43□□□□□ -1.54
CCDC66-221ENST00000487739 CDK4P11802 303 aa5.43□□□□□ -1.54
CCDC66-221ENST00000487739 FCER1AP12319 257 aa5.43□□□□□ -1.54
CCDC66-221ENST00000487739 CTXN1P60606 82 aa5.43□□□□□ -1.54
CCDC66-221ENST00000487739 SLFN5Q08AF3 891 aa5.43□□□□□ -1.54
CCDC66-221ENST00000487739 MIGA2Q7L4E1 593 aa5.43□□□□□ -1.54
CCDC66-221ENST00000487739 ARHGEF25Q86VW2 580 aa5.43□□□□□ -1.54
CCDC66-221ENST00000487739 RHOT1Q8IXI2 618 aa5.43□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms