RNA–Protein interactions for RNA: ENST00000487633.1

COL4A3-206, Transcript of collagen type IV alpha 3 chain, humanhuman

TSL 3

Gene COL4A3, Length 524 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3-206ENST00000487633 CARNS1A5YM72 827 aa6.54□□□□□ -1.36
COL4A3-206ENST00000487633 CHADO15335 359 aa6.54□□□□□ -1.36
COL4A3-206ENST00000487633 SH3BP5O60239 455 aa6.54□□□□□ -1.36
COL4A3-206ENST00000487633 MAFO75444 373 aaPredicted RBP6.54□□□□□ -1.36
COL4A3-206ENST00000487633 AKAP3O75969 853 aa6.54□□□□□ -1.36
COL4A3-206ENST00000487633 PRAMEF12O95522 483 aa6.54□□□□□ -1.36
COL4A3-206ENST00000487633 PRKCBP05771 671 aa6.54□□□□□ -1.36
COL4A3-206ENST00000487633 FTH1P19P0C7X4 201 aa6.54□□□□□ -1.36
COL4A3-206ENST00000487633 MYL4P12829 197 aa6.54□□□□□ -1.36
COL4A3-206ENST00000487633 GBP1P32455 592 aa6.54□□□□□ -1.36
COL4A3-206ENST00000487633 DHPSP49366 369 aaPredicted RBP6.54□□□□□ -1.36
COL4A3-206ENST00000487633 CDR1P51861 262 aa6.54□□□□□ -1.36
COL4A3-206ENST00000487633 ROR1Q01973 937 aa6.54□□□□□ -1.36
COL4A3-206ENST00000487633 PTH1RQ03431 593 aa6.54□□□□□ -1.36
COL4A3-206ENST00000487633 TRAF1Q13077 416 aa6.54□□□□□ -1.36
COL4A3-206ENST00000487633 AMHR2Q16671 573 aa6.54□□□□□ -1.36
COL4A3-206ENST00000487633 IMMTQ16891 758 aaKnown RBP6.54□□□□□ -1.36
COL4A3-206ENST00000487633 TMEM196Q5HYL7 178 aa6.54□□□□□ -1.36
COL4A3-206ENST00000487633 ANO5Q75V66 913 aa6.54□□□□□ -1.36
COL4A3-206ENST00000487633 ZNF410Q86VK4 478 aa6.54□□□□□ -1.36
COL4A3-206ENST00000487633 GPR65Q8IYL9 337 aa6.54□□□□□ -1.36
COL4A3-206ENST00000487633 DEFB119Q8N690 84 aa6.54□□□□□ -1.36
COL4A3-206ENST00000487633 CSGALNACT1Q8TDX6 532 aa6.54□□□□□ -1.36
COL4A3-206ENST00000487633 PRPF31Q8WWY3 499 aaKnown RBP6.54□□□□□ -1.36
COL4A3-206ENST00000487633 ADAMTS14Q8WXS8 1223 aa6.54□□□□□ -1.36
COL4A3-206ENST00000487633 DCBLD2Q96PD2 775 aa6.54□□□□□ -1.36
COL4A3-206ENST00000487633 FNBP1Q96RU3 617 aa6.54□□□□□ -1.36
COL4A3-206ENST00000487633 POLR3CQ9BUI4 534 aaPredicted RBP6.54□□□□□ -1.36
COL4A3-206ENST00000487633 CRISPLD1Q9H336 500 aa6.54□□□□□ -1.36
COL4A3-206ENST00000487633 TRPV4Q9HBA0 871 aa6.54□□□□□ -1.36
COL4A3-206ENST00000487633 RIC8AQ9NPQ8 531 aa6.54□□□□□ -1.36
COL4A3-206ENST00000487633 HPS4Q9NQG7 708 aa6.54□□□□□ -1.36
COL4A3-206ENST00000487633 DISC1Q9NRI5 854 aa6.54□□□□□ -1.36
COL4A3-206ENST00000487633 DNMT3LQ9UJW3 386 aa6.54□□□□□ -1.36
COL4A3-206ENST00000487633 SLC8A2Q9UPR5 921 aa6.54□□□□□ -1.36
COL4A3-206ENST00000487633 SAMM50Q9Y512 469 aa6.54□□□□□ -1.36
COL4A3-206ENST00000487633 MYO18AQ92614 2054 aaKnown RBP6.54□□□□□ -1.36
COL4A3-206ENST00000487633 MYOFQ9NZM1 2061 aa6.54□□□□□ -1.36
COL4A3-206ENST00000487633 A0A087WV48 116 aa6.53□□□□□ -1.36
COL4A3-206ENST00000487633 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa6.53□□□□□ -1.36
COL4A3-206ENST00000487633 A0A1W2PRU2 124 aa6.53□□□□□ -1.36
COL4A3-206ENST00000487633 ZBTB39O15060 712 aa6.53□□□□□ -1.36
COL4A3-206ENST00000487633 MSH4O15457 936 aa6.53□□□□□ -1.36
COL4A3-206ENST00000487633 TLX3O43711 291 aaPredicted RBP6.53□□□□□ -1.36
COL4A3-206ENST00000487633 KRT38O76015 456 aa6.53□□□□□ -1.36
COL4A3-206ENST00000487633 RHOBTB1O94844 696 aa6.53□□□□□ -1.36
COL4A3-206ENST00000487633 ABLIM3O94929 683 aa6.53□□□□□ -1.36
COL4A3-206ENST00000487633 NPTXRO95502 500 aa6.53□□□□□ -1.36
COL4A3-206ENST00000487633 EDN1P05305 212 aa6.53□□□□□ -1.36
COL4A3-206ENST00000487633 ARF4P18085 180 aaPredicted RBP6.53□□□□□ -1.36
COL4A3-206ENST00000487633 FGFR3P22607 806 aa6.53□□□□□ -1.36
COL4A3-206ENST00000487633 ZNF76P36508 570 aa6.53□□□□□ -1.36
COL4A3-206ENST00000487633 MLLT6P55198 1093 aaPredicted RBP6.53□□□□□ -1.36
COL4A3-206ENST00000487633 ARPP19P56211 112 aa6.53□□□□□ -1.36
COL4A3-206ENST00000487633 CLDN6P56747 220 aa6.53□□□□□ -1.36
COL4A3-206ENST00000487633 CAMK2BQ13554 666 aa6.53□□□□□ -1.36
COL4A3-206ENST00000487633 PRR16Q569H4 304 aa6.53□□□□□ -1.36
COL4A3-206ENST00000487633 PDZD4Q76G19 769 aaPredicted RBP6.53□□□□□ -1.36
COL4A3-206ENST00000487633 CYP2U1Q7Z449 544 aa6.53□□□□□ -1.36
COL4A3-206ENST00000487633 RALGPS2Q86X27 583 aaPredicted RBP6.53□□□□□ -1.36
COL4A3-206ENST00000487633 TMC8Q8IU68 726 aa6.53□□□□□ -1.36
COL4A3-206ENST00000487633 ARID3BQ8IVW6 561 aaPredicted RBP6.53□□□□□ -1.36
COL4A3-206ENST00000487633 SFTPA1Q8IWL2 248 aa6.53□□□□□ -1.36
COL4A3-206ENST00000487633 MB21D2Q8IYB1 491 aaPredicted RBP6.53□□□□□ -1.36
COL4A3-206ENST00000487633 TMEFF1Q8IYR6 380 aa6.53□□□□□ -1.36
COL4A3-206ENST00000487633 RPLP0P6Q8NHW5 317 aa6.53□□□□□ -1.36
COL4A3-206ENST00000487633 DEPDC1BQ8WUY9 529 aa6.53□□□□□ -1.36
COL4A3-206ENST00000487633 RSPH1Q8WYR4 309 aa6.53□□□□□ -1.36
COL4A3-206ENST00000487633 TMEM209Q96SK2 561 aa6.53□□□□□ -1.36
COL4A3-206ENST00000487633 DSCC1Q9BVC3 393 aa6.53□□□□□ -1.36
COL4A3-206ENST00000487633 NIFKQ9BYG3 293 aaKnown RBP6.53□□□□□ -1.36
COL4A3-206ENST00000487633 DNAJC25Q9H1X3 360 aa6.53□□□□□ -1.36
COL4A3-206ENST00000487633 C8orf33Q9H7E9 229 aaPredicted RBP6.53□□□□□ -1.36
COL4A3-206ENST00000487633 GOLGA2P5Q9HBQ8 144 aa6.53□□□□□ -1.36
COL4A3-206ENST00000487633 TOR4AQ9NXH8 423 aa6.53□□□□□ -1.36
COL4A3-206ENST00000487633 SEC63Q9UGP8 760 aaKnown RBP6.53□□□□□ -1.36
COL4A3-206ENST00000487633 COL4A3BPQ9Y5P4 624 aa6.53□□□□□ -1.36
COL4A3-206ENST00000487633 INSL5Q9Y5Q6 135 aa6.53□□□□□ -1.36
COL4A3-206ENST00000487633 SF3B1O75533 1304 aaKnown RBP eCLIP6.52□□□□□ -1.37
COL4A3-206ENST00000487633 CNTNAP5Q8WYK1 1306 aa6.52□□□□□ -1.37
COL4A3-206ENST00000487633 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP6.52□□□□□ -1.37
COL4A3-206ENST00000487633 TRABD2BA6NFA1 517 aa6.52□□□□□ -1.37
COL4A3-206ENST00000487633 SMCO2A6NFE2 343 aa6.52□□□□□ -1.37
COL4A3-206ENST00000487633 E7EWF7 191 aa6.52□□□□□ -1.37
COL4A3-206ENST00000487633 CYP3A4P08684 503 aa6.52□□□□□ -1.37
COL4A3-206ENST00000487633 ITPKAP23677 461 aa6.52□□□□□ -1.37
COL4A3-206ENST00000487633 EIF2S3P41091 472 aaKnown RBP6.52□□□□□ -1.37
COL4A3-206ENST00000487633 GALK1P51570 392 aa6.52□□□□□ -1.37
COL4A3-206ENST00000487633 DGKEP52429 567 aa6.52□□□□□ -1.37
COL4A3-206ENST00000487633 LAMTOR4Q0VGL1 99 aa6.52□□□□□ -1.37
COL4A3-206ENST00000487633 FUT2Q10981 343 aa6.52□□□□□ -1.37
COL4A3-206ENST00000487633 GRIK3Q13003 919 aa6.52□□□□□ -1.37
COL4A3-206ENST00000487633 TRIP6Q15654 476 aaKnown RBP6.52□□□□□ -1.37
COL4A3-206ENST00000487633 ELF2Q15723 593 aa6.52□□□□□ -1.37
COL4A3-206ENST00000487633 ANKRD45Q5TZF3 282 aa6.52□□□□□ -1.37
COL4A3-206ENST00000487633 B3GNT9Q6UX72 402 aa6.52□□□□□ -1.37
COL4A3-206ENST00000487633 TMTC3Q6ZXV5 915 aa6.52□□□□□ -1.37
COL4A3-206ENST00000487633 NIPA1Q7RTP0 329 aa6.52□□□□□ -1.37
COL4A3-206ENST00000487633 CATIPQ7Z7H3 387 aa6.52□□□□□ -1.37
COL4A3-206ENST00000487633 SMAP1Q8IYB5 467 aaPredicted RBP6.52□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 102.6 ms