RNA–Protein interactions for RNA: ENST00000487615.5

TRA2B-214, Transcript of transformer 2 beta homolog, humanhuman

TSL 1 (best)

Gene TRA2B, Length 4,485 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-214ENST00000487615 SLC9A9Q8IVB4 645 aa12.53□□□□□ -0.4
TRA2B-214ENST00000487615 RCOR2Q8IZ40 523 aa12.53□□□□□ -0.4
TRA2B-214ENST00000487615 STMN2Q93045 179 aa12.53□□□□□ -0.4
TRA2B-214ENST00000487615 ELAC2Q9BQ52 826 aaKnown RBP12.53□□□□□ -0.4
TRA2B-214ENST00000487615 YDJCA8MPS7 323 aa12.52□□□□□ -0.4
TRA2B-214ENST00000487615 HBP1O60381 514 aa12.52□□□□□ -0.4
TRA2B-214ENST00000487615 MT-ND3P03897 115 aa12.52□□□□□ -0.4
TRA2B-214ENST00000487615 NR1H3Q13133 447 aa12.52□□□□□ -0.4
TRA2B-214ENST00000487615 AGBL2Q5U5Z8 902 aa12.52□□□□□ -0.4
TRA2B-214ENST00000487615 TRMT10CQ7L0Y3 403 aaKnown RBP12.52□□□□□ -0.4
TRA2B-214ENST00000487615 ARMCX2Q7L311 632 aa12.52□□□□□ -0.4
TRA2B-214ENST00000487615 ARHGEF19Q8IW93 802 aa12.52□□□□□ -0.4
TRA2B-214ENST00000487615 GPATCH11Q8N954 259 aa12.52□□□□□ -0.4
TRA2B-214ENST00000487615 BEST2Q8NFU1 509 aa12.52□□□□□ -0.4
TRA2B-214ENST00000487615 PARD3BQ8TEW8 1205 aa12.52□□□□□ -0.4
TRA2B-214ENST00000487615 PPP2R3BQ9Y5P8 575 aa12.52□□□□□ -0.4
TRA2B-214ENST00000487615 ZSCAN5CA6NGD5 496 aaPredicted RBP12.52□□□□□ -0.4
TRA2B-214ENST00000487615 CLTAP09496 248 aa12.52□□□□□ -0.4
TRA2B-214ENST00000487615 BRAFP15056 766 aa12.52□□□□□ -0.4
TRA2B-214ENST00000487615 SDC4P31431 198 aa12.52□□□□□ -0.4
TRA2B-214ENST00000487615 COILP38432 576 aaPredicted RBP12.52□□□□□ -0.4
TRA2B-214ENST00000487615 FNTAP49354 379 aa12.52□□□□□ -0.4
TRA2B-214ENST00000487615 MAP4K3Q8IVH8 894 aa12.52□□□□□ -0.4
TRA2B-214ENST00000487615 DNERQ8NFT8 737 aa12.52□□□□□ -0.4
TRA2B-214ENST00000487615 IL31RAQ8NI17 732 aa12.52□□□□□ -0.4
TRA2B-214ENST00000487615 GABPB2Q8TAK5 448 aaPredicted RBP12.52□□□□□ -0.4
TRA2B-214ENST00000487615 KLHL11Q9NVR0 708 aa12.52□□□□□ -0.4
TRA2B-214ENST00000487615 WDR35Q9P2L0 1181 aa12.52□□□□□ -0.4
TRA2B-214ENST00000487615 TISP43B9A030 160 aa12.52□□□□□ -0.41
TRA2B-214ENST00000487615 MAGEB2O15479 319 aa12.52□□□□□ -0.41
TRA2B-214ENST00000487615 ONECUT3O60422 494 aaPredicted RBP12.52□□□□□ -0.41
TRA2B-214ENST00000487615 C11orf63Q6NUN7 778 aa12.52□□□□□ -0.41
TRA2B-214ENST00000487615 NT5DC3Q86UY8 548 aa12.52□□□□□ -0.41
TRA2B-214ENST00000487615 VSIG10LQ86VR7 867 aa12.52□□□□□ -0.41
TRA2B-214ENST00000487615 VPS52Q8N1B4 723 aa12.52□□□□□ -0.41
TRA2B-214ENST00000487615 KIF12Q96FN5 646 aa12.52□□□□□ -0.41
TRA2B-214ENST00000487615 RSRC1Q96IZ7 334 aaKnown RBP12.52□□□□□ -0.41
TRA2B-214ENST00000487615 BTBD6Q96KE9 485 aa12.52□□□□□ -0.41
TRA2B-214ENST00000487615 MCEEQ96PE7 176 aa12.52□□□□□ -0.41
TRA2B-214ENST00000487615 EPN3Q9H201 632 aa12.52□□□□□ -0.41
TRA2B-214ENST00000487615 OGTO15294 1046 aa12.52□□□□□ -0.41
TRA2B-214ENST00000487615 AGTP01019 485 aa12.52□□□□□ -0.41
TRA2B-214ENST00000487615 ARSEP51690 589 aa12.52□□□□□ -0.41
TRA2B-214ENST00000487615 PIGHQ14442 188 aaPredicted RBP12.52□□□□□ -0.41
TRA2B-214ENST00000487615 ARHGAP24Q8N264 748 aa12.52□□□□□ -0.41
TRA2B-214ENST00000487615 CCNYQ8ND76 341 aa12.52□□□□□ -0.41
TRA2B-214ENST00000487615 DHX38Q92620 1227 aaKnown RBP12.52□□□□□ -0.41
TRA2B-214ENST00000487615 CHMP6Q96FZ7 201 aa12.52□□□□□ -0.41
TRA2B-214ENST00000487615 PRMT7Q9NVM4 692 aaPredicted RBP12.52□□□□□ -0.41
TRA2B-214ENST00000487615 ERAP1Q9NZ08 941 aa12.52□□□□□ -0.41
TRA2B-214ENST00000487615 TJP1Q07157 1748 aa12.52□□□□□ -0.41
TRA2B-214ENST00000487615 LSP1P33241 339 aa12.51□□□□□ -0.41
TRA2B-214ENST00000487615 PPP3CAQ08209 521 aa12.51□□□□□ -0.41
TRA2B-214ENST00000487615 SEZ6Q53EL9 994 aa12.51□□□□□ -0.41
TRA2B-214ENST00000487615 SIX6OS1Q8N1H7 587 aa12.51□□□□□ -0.41
TRA2B-214ENST00000487615 AENQ8WTP8 325 aaKnown RBP12.51□□□□□ -0.41
TRA2B-214ENST00000487615 ARL8AQ96BM9 186 aa12.51□□□□□ -0.41
TRA2B-214ENST00000487615 ACAP3Q96P50 834 aa12.51□□□□□ -0.41
TRA2B-214ENST00000487615 GCOM2Q9BZD3 368 aaPredicted RBP12.51□□□□□ -0.41
TRA2B-214ENST00000487615 GOLGA8MH3BSY2 632 aa12.51□□□□□ -0.41
TRA2B-214ENST00000487615 ZNF263O14978 683 aa12.51□□□□□ -0.41
TRA2B-214ENST00000487615 TOM1L1O75674 476 aa12.51□□□□□ -0.41
TRA2B-214ENST00000487615 WEE2P0C1S8 567 aa12.51□□□□□ -0.41
TRA2B-214ENST00000487615 EFCAB12Q6NXP0 572 aa12.51□□□□□ -0.41
TRA2B-214ENST00000487615 SRLQ86TD4 932 aa12.51□□□□□ -0.41
TRA2B-214ENST00000487615 FEZF2Q8TBJ5 459 aa12.51□□□□□ -0.41
TRA2B-214ENST00000487615 PRPF31Q8WWY3 499 aaKnown RBP12.51□□□□□ -0.41
TRA2B-214ENST00000487615 RILPQ96NA2 401 aa12.51□□□□□ -0.41
TRA2B-214ENST00000487615 A1CFQ9NQ94 594 aaKnown RBP12.51□□□□□ -0.41
TRA2B-214ENST00000487615 AGAP1Q9UPQ3 857 aa12.51□□□□□ -0.41
TRA2B-214ENST00000487615 UBR2Q8IWV8 1755 aa12.51□□□□□ -0.41
TRA2B-214ENST00000487615 IL18RAPO95256 599 aa12.51□□□□□ -0.41
TRA2B-214ENST00000487615 ITGA4P13612 1032 aa12.51□□□□□ -0.41
TRA2B-214ENST00000487615 PTPRAP18433 802 aa12.51□□□□□ -0.41
TRA2B-214ENST00000487615 GTF2BQ00403 316 aa12.51□□□□□ -0.41
TRA2B-214ENST00000487615 GPAT2Q6NUI2 795 aa12.51□□□□□ -0.41
TRA2B-214ENST00000487615 IRF2BP2Q7Z5L9 587 aa12.51□□□□□ -0.41
TRA2B-214ENST00000487615 ATP8B4Q8TF62 1192 aa12.51□□□□□ -0.41
TRA2B-214ENST00000487615 FAF2Q96CS3 445 aa12.51□□□□□ -0.41
TRA2B-214ENST00000487615 RAB3IPQ96QF0 476 aaPredicted RBP12.51□□□□□ -0.41
TRA2B-214ENST00000487615 CGRRF1Q99675 332 aa12.51□□□□□ -0.41
TRA2B-214ENST00000487615 KLC2Q9H0B6 622 aa12.51□□□□□ -0.41
TRA2B-214ENST00000487615 SPON1Q9HCB6 807 aa12.51□□□□□ -0.41
TRA2B-214ENST00000487615 SLTMQ9NWH9 1034 aaKnown RBP eCLIP12.51□□□□□ -0.41
TRA2B-214ENST00000487615 HEY1Q9Y5J3 304 aa12.51□□□□□ -0.41
TRA2B-214ENST00000487615 CIB2O75838 187 aa12.5□□□□□ -0.41
TRA2B-214ENST00000487615 GH1P01241 217 aa12.5□□□□□ -0.41
TRA2B-214ENST00000487615 RRM1P23921 792 aa12.5□□□□□ -0.41
TRA2B-214ENST00000487615 MKRN4PQ13434 485 aaPredicted RBP12.5□□□□□ -0.41
TRA2B-214ENST00000487615 SNAPC2Q13487 334 aa12.5□□□□□ -0.41
TRA2B-214ENST00000487615 SPARCL1Q14515 664 aa12.5□□□□□ -0.41
TRA2B-214ENST00000487615 TAF12Q16514 161 aa12.5□□□□□ -0.41
TRA2B-214ENST00000487615 CCDC38Q502W7 563 aa12.5□□□□□ -0.41
TRA2B-214ENST00000487615 HGSNATQ68CP4 663 aa12.5□□□□□ -0.41
TRA2B-214ENST00000487615 ERO1BQ86YB8 467 aa12.5□□□□□ -0.41
TRA2B-214ENST00000487615 PPFIBP2Q8ND30 876 aa12.5□□□□□ -0.41
TRA2B-214ENST00000487615 TATDN2Q93075 761 aa12.5□□□□□ -0.41
TRA2B-214ENST00000487615 MBOAT7Q96N66 472 aa12.5□□□□□ -0.41
TRA2B-214ENST00000487615 CCT8L2Q96SF2 557 aa12.5□□□□□ -0.41
TRA2B-214ENST00000487615 DYNC1LI1Q9Y6G9 523 aaKnown RBP12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms