RNA–Protein interactions for RNA: ENST00000487462.1

CDK11A-217, Transcript of cyclin dependent kinase 11A, humanhuman

TSL 5

Gene CDK11A, Length 437 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK11A-217ENST00000487462 ZNF511Q8NB15 262 aa10.6□□□□□ -0.71
CDK11A-217ENST00000487462 LNX1Q8TBB1 728 aaPredicted RBP10.6□□□□□ -0.71
CDK11A-217ENST00000487462 BAP1Q92560 729 aa10.6□□□□□ -0.71
CDK11A-217ENST00000487462 RABGGTAQ92696 567 aa10.6□□□□□ -0.71
CDK11A-217ENST00000487462 TCEAL4Q96EI5 215 aa10.6□□□□□ -0.71
CDK11A-217ENST00000487462 MSANTD3Q96H12 275 aa10.6□□□□□ -0.71
CDK11A-217ENST00000487462 ZSWIM3Q96MP5 696 aa10.6□□□□□ -0.71
CDK11A-217ENST00000487462 GAD1Q99259 594 aa10.6□□□□□ -0.71
CDK11A-217ENST00000487462 COLEC11Q9BWP8 271 aa10.6□□□□□ -0.71
CDK11A-217ENST00000487462 FKBPLQ9UIM3 349 aa10.6□□□□□ -0.71
CDK11A-217ENST00000487462 PI4KAP42356 2102 aa10.6□□□□□ -0.71
CDK11A-217ENST00000487462 PTPRBP23467 1997 aa10.59□□□□□ -0.71
CDK11A-217ENST00000487462 TNRC6BQ9UPQ9 1833 aaKnown RBP10.59□□□□□ -0.71
CDK11A-217ENST00000487462 WDR27A2RRH5 827 aa10.59□□□□□ -0.71
CDK11A-217ENST00000487462 FAM86B1E9PN63 330 aa10.59□□□□□ -0.71
CDK11A-217ENST00000487462 H0Y626 953 aa10.59□□□□□ -0.71
CDK11A-217ENST00000487462 IPO5O00410 1097 aaKnown RBP10.59□□□□□ -0.71
CDK11A-217ENST00000487462 WNT7AO00755 349 aa10.59□□□□□ -0.71
CDK11A-217ENST00000487462 DCLK1O15075 740 aa10.59□□□□□ -0.71
CDK11A-217ENST00000487462 TRIM16O95361 564 aa10.59□□□□□ -0.71
CDK11A-217ENST00000487462 PSAPP07602 524 aa10.59□□□□□ -0.71
CDK11A-217ENST00000487462 FAM86B2P0C5J1 330 aa10.59□□□□□ -0.71
CDK11A-217ENST00000487462 HOXA11P31270 313 aaPredicted RBP10.59□□□□□ -0.71
CDK11A-217ENST00000487462 VIPR2P41587 438 aa10.59□□□□□ -0.71
CDK11A-217ENST00000487462 CCR2P41597 374 aa10.59□□□□□ -0.71
CDK11A-217ENST00000487462 PRKCEQ02156 737 aa10.59□□□□□ -0.71
CDK11A-217ENST00000487462 TARBP2Q15633 366 aaKnown RBP10.59□□□□□ -0.71
CDK11A-217ENST00000487462 PSMD5Q16401 504 aa10.59□□□□□ -0.71
CDK11A-217ENST00000487462 IMMTQ16891 758 aaKnown RBP10.59□□□□□ -0.71
CDK11A-217ENST00000487462 UVSSAQ2YD98 709 aa10.59□□□□□ -0.71
CDK11A-217ENST00000487462 ZNF746Q6NUN9 644 aaPredicted RBP10.59□□□□□ -0.71
CDK11A-217ENST00000487462 C1orf228Q6PIY5 440 aa10.59□□□□□ -0.71
CDK11A-217ENST00000487462 NIPA1Q7RTP0 329 aa10.59□□□□□ -0.71
CDK11A-217ENST00000487462 ZNF410Q86VK4 478 aa10.59□□□□□ -0.71
CDK11A-217ENST00000487462 BPHLQ86WA6 291 aaPredicted RBP10.59□□□□□ -0.71
CDK11A-217ENST00000487462 TICAM2Q86XR7 235 aa10.59□□□□□ -0.71
CDK11A-217ENST00000487462 KSR1Q8IVT5 923 aa10.59□□□□□ -0.71
CDK11A-217ENST00000487462 SMAP1Q8IYB5 467 aaPredicted RBP10.59□□□□□ -0.71
CDK11A-217ENST00000487462 EHBP1Q8NDI1 1231 aa10.59□□□□□ -0.71
CDK11A-217ENST00000487462 MDM1Q8TC05 714 aa10.59□□□□□ -0.71
CDK11A-217ENST00000487462 PIK3R5Q8WYR1 880 aa10.59□□□□□ -0.71
CDK11A-217ENST00000487462 UBL7Q96S82 380 aaPredicted RBP10.59□□□□□ -0.71
CDK11A-217ENST00000487462 CEP89Q96ST8 783 aa10.59□□□□□ -0.71
CDK11A-217ENST00000487462 IRX2Q9BZI1 471 aaPredicted RBP10.59□□□□□ -0.71
CDK11A-217ENST00000487462 CHMP4BQ9H444 224 aaKnown RBP10.59□□□□□ -0.71
CDK11A-217ENST00000487462 CCDC86Q9H6F5 360 aaKnown RBP10.59□□□□□ -0.71
CDK11A-217ENST00000487462 IFT122Q9HBG6 1241 aa10.59□□□□□ -0.71
CDK11A-217ENST00000487462 CACNG4Q9UBN1 327 aa10.59□□□□□ -0.71
CDK11A-217ENST00000487462 TEP1Q99973 2627 aaKnown RBP10.58□□□□□ -0.72
CDK11A-217ENST00000487462 IGLV3-22A0A075B6J6 115 aa10.58□□□□□ -0.72
CDK11A-217ENST00000487462 IGKV6-21A0A0C4DH24 114 aa10.58□□□□□ -0.72
CDK11A-217ENST00000487462 MYBPHLA2RUH7 354 aa10.58□□□□□ -0.72
CDK11A-217ENST00000487462 SPECC1L-ADORA2AF8WAN1 911 aa10.58□□□□□ -0.72
CDK11A-217ENST00000487462 ZNF263O14978 683 aa10.58□□□□□ -0.72
CDK11A-217ENST00000487462 KHNYNO15037 678 aaKnown RBP10.58□□□□□ -0.72
CDK11A-217ENST00000487462 PLEKHA8P1O95397 391 aa10.58□□□□□ -0.72
CDK11A-217ENST00000487462 MFAP1P55081 439 aaKnown RBP10.58□□□□□ -0.72
CDK11A-217ENST00000487462 FAM193AP78312 1265 aa10.58□□□□□ -0.72
CDK11A-217ENST00000487462 IRX4P78413 519 aa10.58□□□□□ -0.72
CDK11A-217ENST00000487462 PRR20EP86478 221 aa10.58□□□□□ -0.72
CDK11A-217ENST00000487462 PRR20CP86479 221 aa10.58□□□□□ -0.72
CDK11A-217ENST00000487462 PRR20DP86480 221 aa10.58□□□□□ -0.72
CDK11A-217ENST00000487462 PRR20BP86481 221 aa10.58□□□□□ -0.72
CDK11A-217ENST00000487462 PRR20AP86496 221 aa10.58□□□□□ -0.72
CDK11A-217ENST00000487462 CDC42EP1Q00587 391 aa10.58□□□□□ -0.72
CDK11A-217ENST00000487462 PON2Q15165 354 aa10.58□□□□□ -0.72
CDK11A-217ENST00000487462 ELF2Q15723 593 aa10.58□□□□□ -0.72
CDK11A-217ENST00000487462 UGCGQ16739 394 aa10.58□□□□□ -0.72
CDK11A-217ENST00000487462 ZNF605Q86T29 641 aa10.58□□□□□ -0.72
CDK11A-217ENST00000487462 SYNPOQ8N3V7 929 aa10.58□□□□□ -0.72
CDK11A-217ENST00000487462 SRBD1Q8N5C6 995 aaKnown RBP10.58□□□□□ -0.72
CDK11A-217ENST00000487462 GSTCDQ8NEC7 633 aa10.58□□□□□ -0.72
CDK11A-217ENST00000487462 DEPDC1BQ8WUY9 529 aa10.58□□□□□ -0.72
CDK11A-217ENST00000487462 SMARCD2Q92925 531 aa10.58□□□□□ -0.72
CDK11A-217ENST00000487462 TTPALQ9BTX7 342 aa10.58□□□□□ -0.72
CDK11A-217ENST00000487462 ANO3Q9BYT9 981 aa10.58□□□□□ -0.72
CDK11A-217ENST00000487462 INO80BQ9C086 356 aaPredicted RBP10.58□□□□□ -0.72
CDK11A-217ENST00000487462 SLC32A1Q9H598 525 aa10.58□□□□□ -0.72
CDK11A-217ENST00000487462 UBN1Q9NPG3 1134 aa10.58□□□□□ -0.72
CDK11A-217ENST00000487462 POLR3BQ9NW08 1133 aaPredicted RBP10.58□□□□□ -0.72
CDK11A-217ENST00000487462 IPPQ9Y573 584 aa10.58□□□□□ -0.72
CDK11A-217ENST00000487462 PCDHA10Q9Y5I2 948 aa10.58□□□□□ -0.72
CDK11A-217ENST00000487462 KIAA1549LQ6ZVL6 1849 aa10.58□□□□□ -0.72
CDK11A-217ENST00000487462 SF3B1O75533 1304 aaKnown RBP eCLIP10.58□□□□□ -0.72
CDK11A-217ENST00000487462 ADAMTS9Q9P2N4 1935 aa10.57□□□□□ -0.72
CDK11A-217ENST00000487462 hCG_1642624A0A1W2PR95 340 aa10.57□□□□□ -0.72
CDK11A-217ENST00000487462 IFIT3O14879 490 aaKnown RBP10.57□□□□□ -0.72
CDK11A-217ENST00000487462 MEFVO15553 781 aaPredicted RBP10.57□□□□□ -0.72
CDK11A-217ENST00000487462 ITGA4P13612 1032 aa10.57□□□□□ -0.72
CDK11A-217ENST00000487462 SMARCA1P28370 1054 aa10.57□□□□□ -0.72
CDK11A-217ENST00000487462 SREBF1P36956 1147 aa10.57□□□□□ -0.72
CDK11A-217ENST00000487462 KPNA1P52294 538 aaPredicted RBP10.57□□□□□ -0.72
CDK11A-217ENST00000487462 RAB33AQ14088 237 aa10.57□□□□□ -0.72
CDK11A-217ENST00000487462 RTL10Q7L3V2 364 aa10.57□□□□□ -0.72
CDK11A-217ENST00000487462 PLA2G4DQ86XP0 818 aa10.57□□□□□ -0.72
CDK11A-217ENST00000487462 RHPN2Q8IUC4 686 aa10.57□□□□□ -0.72
CDK11A-217ENST00000487462 MFSD6LQ8IWD5 586 aa10.57□□□□□ -0.72
CDK11A-217ENST00000487462 CMTR1Q8N1G2 835 aaKnown RBP10.57□□□□□ -0.72
CDK11A-217ENST00000487462 ZNF843Q8N446 348 aa10.57□□□□□ -0.72
CDK11A-217ENST00000487462 CSGALNACT1Q8TDX6 532 aa10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms