RNA–Protein interactions for RNA: ENST00000487305.5

TMEM39B-208, Transcript of transmembrane protein 39B, humanhuman

TSL 2

Gene TMEM39B, Length 2,087 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39B-208ENST00000487305 SYTL5Q8TDW5 730 aaPredicted RBP13.19□□□□□ -0.3
TMEM39B-208ENST00000487305 POMGNT1Q8WZA1 660 aa13.19□□□□□ -0.3
TMEM39B-208ENST00000487305 CCDC127Q96BQ5 260 aa13.19□□□□□ -0.3
TMEM39B-208ENST00000487305 GPRASP2Q96D09 838 aa13.19□□□□□ -0.3
TMEM39B-208ENST00000487305 NOD2Q9HC29 1040 aa13.19□□□□□ -0.3
TMEM39B-208ENST00000487305 LRRC4CQ9HCJ2 640 aa13.19□□□□□ -0.3
TMEM39B-208ENST00000487305 NEU2Q9Y3R4 380 aa13.19□□□□□ -0.3
TMEM39B-208ENST00000487305 PCDHA10Q9Y5I2 948 aa13.19□□□□□ -0.3
TMEM39B-208ENST00000487305 NFASCO94856 1347 aa13.19□□□□□ -0.3
TMEM39B-208ENST00000487305 TCP11X1B4DZS4 312 aa13.19□□□□□ -0.3
TMEM39B-208ENST00000487305 MAGEB2O15479 319 aa13.19□□□□□ -0.3
TMEM39B-208ENST00000487305 EXTL3O43909 919 aa13.19□□□□□ -0.3
TMEM39B-208ENST00000487305 BRAFP15056 766 aa13.19□□□□□ -0.3
TMEM39B-208ENST00000487305 STX2P32856 288 aa13.19□□□□□ -0.3
TMEM39B-208ENST00000487305 KCNJ1P48048 391 aa13.19□□□□□ -0.3
TMEM39B-208ENST00000487305 MCL1Q07820 350 aa13.19□□□□□ -0.3
TMEM39B-208ENST00000487305 SPRED3Q2MJR0 410 aa13.19□□□□□ -0.3
TMEM39B-208ENST00000487305 SLFN12LQ6IEE8 588 aa13.19□□□□□ -0.3
TMEM39B-208ENST00000487305 VSTM1Q6UX27 236 aa13.19□□□□□ -0.3
TMEM39B-208ENST00000487305 MAEAQ7L5Y9 396 aa13.19□□□□□ -0.3
TMEM39B-208ENST00000487305 NLRX1Q86UT6 975 aa13.19□□□□□ -0.3
TMEM39B-208ENST00000487305 PHF13Q86YI8 300 aaPredicted RBP13.19□□□□□ -0.3
TMEM39B-208ENST00000487305 ZCCHC9Q8N567 271 aaKnown RBP13.19□□□□□ -0.3
TMEM39B-208ENST00000487305 TAS1R2Q8TE23 839 aa13.19□□□□□ -0.3
TMEM39B-208ENST00000487305 RBM41Q96IZ5 413 aaKnown RBP13.19□□□□□ -0.3
TMEM39B-208ENST00000487305 CDHR1Q96JP9 859 aa13.19□□□□□ -0.3
TMEM39B-208ENST00000487305 RAB3IPQ96QF0 476 aaPredicted RBP13.19□□□□□ -0.3
TMEM39B-208ENST00000487305 BATF3Q9NR55 127 aa13.19□□□□□ -0.3
TMEM39B-208ENST00000487305 SMG5Q9UPR3 1016 aaKnown RBP13.19□□□□□ -0.3
TMEM39B-208ENST00000487305 TCP10L2B9ZVM9 353 aa13.18□□□□□ -0.3
TMEM39B-208ENST00000487305 ANKRD63C9JTQ0 380 aa13.18□□□□□ -0.3
TMEM39B-208ENST00000487305 ACSL3O95573 720 aa13.18□□□□□ -0.3
TMEM39B-208ENST00000487305 NQO1P15559 274 aaKnown RBP13.18□□□□□ -0.3
TMEM39B-208ENST00000487305 CCND1P24385 295 aa13.18□□□□□ -0.3
TMEM39B-208ENST00000487305 ELF1P32519 619 aa13.18□□□□□ -0.3
TMEM39B-208ENST00000487305 SLC8A3P57103 927 aa13.18□□□□□ -0.3
TMEM39B-208ENST00000487305 MRPS9P82933 396 aaKnown RBP13.18□□□□□ -0.3
TMEM39B-208ENST00000487305 TAP1Q03518 808 aa13.18□□□□□ -0.3
TMEM39B-208ENST00000487305 C1QBPQ07021 282 aaKnown RBP13.18□□□□□ -0.3
TMEM39B-208ENST00000487305 PSMD6Q15008 389 aa13.18□□□□□ -0.3
TMEM39B-208ENST00000487305 LONRF1Q17RB8 773 aa13.18□□□□□ -0.3
TMEM39B-208ENST00000487305 NUGGCQ68CJ6 796 aa13.18□□□□□ -0.3
TMEM39B-208ENST00000487305 SLC30A10Q6XR72 485 aa13.18□□□□□ -0.3
TMEM39B-208ENST00000487305 ANKS1BQ7Z6G8 1248 aa13.18□□□□□ -0.3
TMEM39B-208ENST00000487305 CEP57Q86XR8 500 aa13.18□□□□□ -0.3
TMEM39B-208ENST00000487305 RCOR2Q8IZ40 523 aa13.18□□□□□ -0.3
TMEM39B-208ENST00000487305 FBF1Q8TES7 1133 aa13.18□□□□□ -0.3
TMEM39B-208ENST00000487305 C1orf54Q8WWF1 131 aa13.18□□□□□ -0.3
TMEM39B-208ENST00000487305 RSRC1Q96IZ7 334 aaKnown RBP13.18□□□□□ -0.3
TMEM39B-208ENST00000487305 FRMD8P1Q9BZ68 369 aaPredicted RBP13.18□□□□□ -0.3
TMEM39B-208ENST00000487305 KIAA1683Q9H0B3 1180 aa13.18□□□□□ -0.3
TMEM39B-208ENST00000487305 VEZTQ9HBM0 779 aa13.18□□□□□ -0.3
TMEM39B-208ENST00000487305 SLC38A10Q9HBR0 1119 aa13.18□□□□□ -0.3
TMEM39B-208ENST00000487305 NINJ2Q9NZG7 142 aa13.18□□□□□ -0.3
TMEM39B-208ENST00000487305 PRKAG3Q9UGI9 489 aa13.18□□□□□ -0.3
TMEM39B-208ENST00000487305 FETUBQ9UGM5 382 aa13.18□□□□□ -0.3
TMEM39B-208ENST00000487305 DRG1Q9Y295 367 aaKnown RBP13.18□□□□□ -0.3
TMEM39B-208ENST00000487305 TISP43B9A030 160 aa13.17□□□□□ -0.3
TMEM39B-208ENST00000487305 ATP2A1O14983 1001 aa13.17□□□□□ -0.3
TMEM39B-208ENST00000487305 ATMINO43313 823 aaPredicted RBP13.17□□□□□ -0.3
TMEM39B-208ENST00000487305 STAM2O75886 525 aa13.17□□□□□ -0.3
TMEM39B-208ENST00000487305 WFS1O76024 890 aa13.17□□□□□ -0.3
TMEM39B-208ENST00000487305 LDHAP00338 332 aaKnown RBP13.17□□□□□ -0.3
TMEM39B-208ENST00000487305 PTPN7P35236 360 aa13.17□□□□□ -0.3
TMEM39B-208ENST00000487305 IFNAR2P48551 515 aa13.17□□□□□ -0.3
TMEM39B-208ENST00000487305 AP3M2P53677 418 aa13.17□□□□□ -0.3
TMEM39B-208ENST00000487305 PGM5Q15124 567 aa13.17□□□□□ -0.3
TMEM39B-208ENST00000487305 MTFR1Q15390 333 aa13.17□□□□□ -0.3
TMEM39B-208ENST00000487305 FAM212AQ96EL1 285 aa13.17□□□□□ -0.3
TMEM39B-208ENST00000487305 AGBL1Q96MI9 1066 aa13.17□□□□□ -0.3
TMEM39B-208ENST00000487305 OSBPL8Q9BZF1 889 aa13.17□□□□□ -0.3
TMEM39B-208ENST00000487305 EBF2Q9HAK2 575 aa13.17□□□□□ -0.3
TMEM39B-208ENST00000487305 KCNK9Q9NPC2 374 aa13.17□□□□□ -0.3
TMEM39B-208ENST00000487305 TXLNGQ9NUQ3 528 aa13.17□□□□□ -0.3
TMEM39B-208ENST00000487305 IP6K2Q9UHH9 426 aa13.17□□□□□ -0.3
TMEM39B-208ENST00000487305 CNTN6Q9UQ52 1028 aa13.17□□□□□ -0.3
TMEM39B-208ENST00000487305 MYPNQ86TC9 1320 aa13.17□□□□□ -0.3
TMEM39B-208ENST00000487305 CNTNAP1P78357 1384 aa13.17□□□□□ -0.3
TMEM39B-208ENST00000487305 GOLGA8IPA6NC78 632 aa13.17□□□□□ -0.3
TMEM39B-208ENST00000487305 FAM47DPA6NHR8 397 aa13.17□□□□□ -0.3
TMEM39B-208ENST00000487305 GOLGA8JA6NMD2 632 aa13.17□□□□□ -0.3
TMEM39B-208ENST00000487305 SMAPO00193 183 aa13.17□□□□□ -0.3
TMEM39B-208ENST00000487305 PRPF4O43172 522 aaKnown RBP eCLIP13.17□□□□□ -0.31e-5■■■■□ 19.3
TMEM39B-208ENST00000487305 ZBED4O75132 1171 aa13.17□□□□□ -0.3
TMEM39B-208ENST00000487305 TJP3O95049 919 aa13.17□□□□□ -0.3
TMEM39B-208ENST00000487305 ZACNQ401N2 412 aa13.17□□□□□ -0.3
TMEM39B-208ENST00000487305 ZC3H12AQ5D1E8 599 aaKnown RBP13.17□□□□□ -0.3
TMEM39B-208ENST00000487305 PLEKHA7Q6IQ23 1121 aa13.17□□□□□ -0.3
TMEM39B-208ENST00000487305 MON1BQ7L1V2 547 aa13.17□□□□□ -0.3
TMEM39B-208ENST00000487305 FAM228AQ86W67 206 aa13.17□□□□□ -0.3
TMEM39B-208ENST00000487305 CFAP61Q8NHU2 1237 aa13.17□□□□□ -0.3
TMEM39B-208ENST00000487305 FNBP1Q96RU3 617 aa13.17□□□□□ -0.3
TMEM39B-208ENST00000487305 GMLQ99445 158 aa13.17□□□□□ -0.3
TMEM39B-208ENST00000487305 SSU72Q9NP77 194 aaKnown RBP13.17□□□□□ -0.3
TMEM39B-208ENST00000487305 ARHGEF3Q9NR81 526 aa13.17□□□□□ -0.3
TMEM39B-208ENST00000487305 PARVAQ9NVD7 372 aa13.17□□□□□ -0.3
TMEM39B-208ENST00000487305 COL20A1Q9P218 1284 aa13.17□□□□□ -0.3
TMEM39B-208ENST00000487305 RPL26L1Q9UNX3 145 aaKnown RBP13.17□□□□□ -0.3
TMEM39B-208ENST00000487305 STARD13Q9Y3M8 1113 aa13.17□□□□□ -0.3
TMEM39B-208ENST00000487305 STYXL1Q9Y6J8 313 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms