RNA–Protein interactions for RNA: ENST00000486711.1

SMC4-218, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 621 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-218ENST00000486711 STRIP1Q5VSL9 837 aa5.85□□□□□ -1.47
SMC4-218ENST00000486711 BTNL9Q6UXG8 535 aa5.85□□□□□ -1.47
SMC4-218ENST00000486711 PDZD4Q76G19 769 aaPredicted RBP5.85□□□□□ -1.47
SMC4-218ENST00000486711 EPM2AIP1Q7L775 607 aaPredicted RBP5.85□□□□□ -1.47
SMC4-218ENST00000486711 LCORLQ8N3X6 602 aa5.85□□□□□ -1.47
SMC4-218ENST00000486711 SNX33Q8WV41 574 aa5.85□□□□□ -1.47
SMC4-218ENST00000486711 MAP3K14Q99558 947 aa5.85□□□□□ -1.47
SMC4-218ENST00000486711 WDR11Q9BZH6 1224 aa5.85□□□□□ -1.47
SMC4-218ENST00000486711 GREM2Q9H772 168 aa5.85□□□□□ -1.47
SMC4-218ENST00000486711 OBP2AQ9NY56 170 aa5.85□□□□□ -1.47
SMC4-218ENST00000486711 PTGFRNQ9P2B2 879 aa5.85□□□□□ -1.47
SMC4-218ENST00000486711 POLR2AP24928 1970 aaKnown RBP5.84□□□□□ -1.47
SMC4-218ENST00000486711 ZMYM3Q14202 1370 aa5.84□□□□□ -1.47
SMC4-218ENST00000486711 AP1G1O43747 822 aa5.84□□□□□ -1.47
SMC4-218ENST00000486711 TMEM127O75204 238 aa5.84□□□□□ -1.47
SMC4-218ENST00000486711 ITGA10O75578 1167 aa5.84□□□□□ -1.47
SMC4-218ENST00000486711 GASTP01350 101 aa5.84□□□□□ -1.47
SMC4-218ENST00000486711 MYL1P05976 194 aa5.84□□□□□ -1.47
SMC4-218ENST00000486711 CCDC142Q17RM4 750 aa5.84□□□□□ -1.47
SMC4-218ENST00000486711 EFCAB12Q6NXP0 572 aa5.84□□□□□ -1.47
SMC4-218ENST00000486711 OLFML1Q6UWY5 402 aa5.84□□□□□ -1.47
SMC4-218ENST00000486711 DGKHQ86XP1 1220 aa5.84□□□□□ -1.47
SMC4-218ENST00000486711 SYT12Q8IV01 421 aa5.84□□□□□ -1.47
SMC4-218ENST00000486711 COA7Q96BR5 231 aa5.84□□□□□ -1.47
SMC4-218ENST00000486711 ZNF764Q96H86 408 aaPredicted RBP5.84□□□□□ -1.47
SMC4-218ENST00000486711 ANLNQ9NQW6 1124 aa5.84□□□□□ -1.47
SMC4-218ENST00000486711 DKK2Q9UBU2 259 aa5.84□□□□□ -1.47
SMC4-218ENST00000486711 TBKBP1A7MCY6 615 aa5.83□□□□□ -1.48
SMC4-218ENST00000486711 CTNND1O60716 968 aaKnown RBP5.83□□□□□ -1.48
SMC4-218ENST00000486711 HLA-DOAP06340 250 aa5.83□□□□□ -1.48
SMC4-218ENST00000486711 POU2F2P09086 479 aa5.83□□□□□ -1.48
SMC4-218ENST00000486711 GUCY1B3Q02153 619 aa5.83□□□□□ -1.48
SMC4-218ENST00000486711 ANKS6Q68DC2 871 aa5.83□□□□□ -1.48
SMC4-218ENST00000486711 PPP4R4Q6NUP7 873 aa5.83□□□□□ -1.48
SMC4-218ENST00000486711 ABHD15Q6UXT9 468 aa5.83□□□□□ -1.48
SMC4-218ENST00000486711 MIGA2Q7L4E1 593 aa5.83□□□□□ -1.48
SMC4-218ENST00000486711 CATIPQ7Z7H3 387 aa5.83□□□□□ -1.48
SMC4-218ENST00000486711 CPEB3Q8NE35 698 aaKnown RBP5.83□□□□□ -1.48
SMC4-218ENST00000486711 SLC35G2Q8TBE7 412 aa5.83□□□□□ -1.48
SMC4-218ENST00000486711 NRG4Q8WWG1 115 aa5.83□□□□□ -1.48
SMC4-218ENST00000486711 TFAP2CQ92754 450 aa5.83□□□□□ -1.48
SMC4-218ENST00000486711 HDAC10Q969S8 669 aa5.83□□□□□ -1.48
SMC4-218ENST00000486711 COQ10AQ96MF6 247 aa5.83□□□□□ -1.48
SMC4-218ENST00000486711 C1orf112Q9NSG2 853 aa5.83□□□□□ -1.48
SMC4-218ENST00000486711 GPRC5DQ9NZD1 345 aa5.83□□□□□ -1.48
SMC4-218ENST00000486711 POGKQ9P215 609 aa5.83□□□□□ -1.48
SMC4-218ENST00000486711 FAM171A2A8MVW0 826 aa5.82□□□□□ -1.48
SMC4-218ENST00000486711 RPLP2P05387 115 aaKnown RBP5.82□□□□□ -1.48
SMC4-218ENST00000486711 GSPT1P15170 499 aaKnown RBP5.82□□□□□ -1.48
SMC4-218ENST00000486711 PDCP20941 246 aa5.82□□□□□ -1.48
SMC4-218ENST00000486711 CTSSP25774 331 aa5.82□□□□□ -1.48
SMC4-218ENST00000486711 MCAMP43121 646 aa5.82□□□□□ -1.48
SMC4-218ENST00000486711 BLOC1S1P78537 153 aa5.82□□□□□ -1.48
SMC4-218ENST00000486711 MXRA7P84157 204 aa5.82□□□□□ -1.48
SMC4-218ENST00000486711 CSRP2Q16527 193 aa5.82□□□□□ -1.48
SMC4-218ENST00000486711 BMT2Q1RMZ1 405 aa5.82□□□□□ -1.48
SMC4-218ENST00000486711 PDCD4Q53EL6 469 aaKnown RBP5.82□□□□□ -1.48
SMC4-218ENST00000486711 ATAT1Q5SQI0 421 aa5.82□□□□□ -1.48
SMC4-218ENST00000486711 PPP4R3AQ6IN85 833 aa5.82□□□□□ -1.48
SMC4-218ENST00000486711 KSR2Q6VAB6 950 aa5.82□□□□□ -1.48
SMC4-218ENST00000486711 USP45Q70EL2 814 aa5.82□□□□□ -1.48
SMC4-218ENST00000486711 ADGRG3Q86Y34 549 aa5.82□□□□□ -1.48
SMC4-218ENST00000486711 GRAMD1CQ8IYS0 662 aa5.82□□□□□ -1.48
SMC4-218ENST00000486711 CAMKK1Q8N5S9 505 aa5.82□□□□□ -1.48
SMC4-218ENST00000486711 ZFP28Q8NHY6 868 aa5.82□□□□□ -1.48
SMC4-218ENST00000486711 MDM1Q8TC05 714 aa5.82□□□□□ -1.48
SMC4-218ENST00000486711 ZNF480Q8WV37 535 aa5.82□□□□□ -1.48
SMC4-218ENST00000486711 HPS3Q969F9 1004 aa5.82□□□□□ -1.48
SMC4-218ENST00000486711 GTPBP4Q9BZE4 634 aaKnown RBP5.82□□□□□ -1.48
SMC4-218ENST00000486711 SYNPO2LQ9H987 977 aa5.82□□□□□ -1.48
SMC4-218ENST00000486711 RBM12Q9NTZ6 932 aaKnown RBP5.82□□□□□ -1.48
SMC4-218ENST00000486711 SYBUQ9NX95 663 aa5.82□□□□□ -1.48
SMC4-218ENST00000486711 INTUQ9ULD6 942 aa5.82□□□□□ -1.48
SMC4-218ENST00000486711 FRMPD2Q68DX3 1309 aaPredicted RBP5.81□□□□□ -1.48
SMC4-218ENST00000486711 CCDC154A6NI56 674 aa5.81□□□□□ -1.48
SMC4-218ENST00000486711 KIAA0355O15063 1070 aa5.81□□□□□ -1.48
SMC4-218ENST00000486711 PHF2O75151 1096 aa5.81□□□□□ -1.48
SMC4-218ENST00000486711 MAP4K4O95819 1239 aaPredicted RBP5.81□□□□□ -1.48
SMC4-218ENST00000486711 HKR1P10072 659 aa5.81□□□□□ -1.48
SMC4-218ENST00000486711 DDX6P26196 483 aaKnown RBP eCLIP5.81□□□□□ -1.48
SMC4-218ENST00000486711 CRHR1P34998 444 aa5.81□□□□□ -1.48
SMC4-218ENST00000486711 MRPS21P82921 87 aaKnown RBP5.81□□□□□ -1.48
SMC4-218ENST00000486711 HDAC1Q13547 482 aaPredicted RBP5.81□□□□□ -1.48
SMC4-218ENST00000486711 GBX1Q14549 363 aa5.81□□□□□ -1.48
SMC4-218ENST00000486711 ZNF267Q14586 743 aaPredicted RBP5.81□□□□□ -1.48
SMC4-218ENST00000486711 NOMO1Q15155 1222 aa5.81□□□□□ -1.48
SMC4-218ENST00000486711 PGS1Q32NB8 556 aa5.81□□□□□ -1.48
SMC4-218ENST00000486711 SYCE2Q6PIF2 218 aa5.81□□□□□ -1.48
SMC4-218ENST00000486711 RNF169Q8NCN4 708 aa5.81□□□□□ -1.48
SMC4-218ENST00000486711 DIS3LQ8TF46 1054 aaKnown RBP5.81□□□□□ -1.48
SMC4-218ENST00000486711 LINC00476Q8WZB0 136 aa5.81□□□□□ -1.48
SMC4-218ENST00000486711 CAVIN3Q969G5 261 aa5.81□□□□□ -1.48
SMC4-218ENST00000486711 C1GALT1C1Q96EU7 318 aa5.81□□□□□ -1.48
SMC4-218ENST00000486711 MVB12AQ96EY5 273 aa5.81□□□□□ -1.48
SMC4-218ENST00000486711 TAAR9Q96RI9 348 aa5.81□□□□□ -1.48
SMC4-218ENST00000486711 SLC12A5Q9H2X9 1139 aa5.81□□□□□ -1.48
SMC4-218ENST00000486711 SERPINB13Q9UIV8 391 aa5.81□□□□□ -1.48
SMC4-218ENST00000486711 TNFRSF18Q9Y5U5 241 aa5.81□□□□□ -1.48
SMC4-218ENST00000486711 RPTORQ8N122 1335 aa5.8□□□□□ -1.48
SMC4-218ENST00000486711 PIPSLA2A3N6 862 aa5.8□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms