RNA–Protein interactions for RNA: ENST00000486533.1

COL12A1-208, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL12A1, Length 1,554 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-208ENST00000486533 PAN2Q504Q3 1202 aaKnown RBP9.75□□□□□ -0.85
COL12A1-208ENST00000486533 ODR4Q5SWX8 454 aa9.75□□□□□ -0.85
COL12A1-208ENST00000486533 NCAPH2Q6IBW4 605 aa9.75□□□□□ -0.85
COL12A1-208ENST00000486533 EMBQ6PCB8 327 aa9.75□□□□□ -0.85
COL12A1-208ENST00000486533 EP400NLQ6ZTU2 488 aa9.75□□□□□ -0.85
COL12A1-208ENST00000486533 MIER3Q7Z3K6 550 aa9.75□□□□□ -0.85
COL12A1-208ENST00000486533 LRRC71Q8N4P6 559 aa9.75□□□□□ -0.85
COL12A1-208ENST00000486533 KCTD17Q8N5Z5 321 aa9.75□□□□□ -0.85
COL12A1-208ENST00000486533 BANK1Q8NDB2 785 aa9.75□□□□□ -0.85
COL12A1-208ENST00000486533 SNX29Q8TEQ0 813 aa9.75□□□□□ -0.85
COL12A1-208ENST00000486533 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP9.75□□□□□ -0.85
COL12A1-208ENST00000486533 ZNF689Q96CS4 500 aaPredicted RBP9.75□□□□□ -0.85
COL12A1-208ENST00000486533 SCLT1Q96NL6 688 aa9.75□□□□□ -0.85
COL12A1-208ENST00000486533 NOX5Q96PH1 765 aa9.75□□□□□ -0.85
COL12A1-208ENST00000486533 UBE2ZQ9H832 354 aaPredicted RBP9.75□□□□□ -0.85
COL12A1-208ENST00000486533 NRBP2Q9NSY0 501 aa9.75□□□□□ -0.85
COL12A1-208ENST00000486533 CEP72Q9P209 647 aa9.75□□□□□ -0.85
COL12A1-208ENST00000486533 DDX25Q9UHL0 483 aaKnown RBP9.75□□□□□ -0.85
COL12A1-208ENST00000486533 SNX12Q9UMY4 172 aa9.75□□□□□ -0.85
COL12A1-208ENST00000486533 CYP3A7-CYP3A51PA0A087WV96 503 aa9.75□□□□□ -0.85
COL12A1-208ENST00000486533 GRID2IPA4D2P6 1211 aa9.75□□□□□ -0.85
COL12A1-208ENST00000486533 PP2D1A8MPX8 630 aa9.75□□□□□ -0.85
COL12A1-208ENST00000486533 H3BQF6 201 aa9.75□□□□□ -0.85
COL12A1-208ENST00000486533 GPR182O15218 404 aa9.75□□□□□ -0.85
COL12A1-208ENST00000486533 ZNF862O60290 1169 aa9.75□□□□□ -0.85
COL12A1-208ENST00000486533 PSMD10O75832 226 aa9.75□□□□□ -0.85
COL12A1-208ENST00000486533 RB1P06400 928 aa9.75□□□□□ -0.85
COL12A1-208ENST00000486533 CYP3A7P24462 503 aa9.75□□□□□ -0.85
COL12A1-208ENST00000486533 BMPR1AP36894 532 aa9.75□□□□□ -0.85
COL12A1-208ENST00000486533 TXKP42681 527 aa9.75□□□□□ -0.85
COL12A1-208ENST00000486533 PMS1P54277 932 aaKnown RBP9.75□□□□□ -0.85
COL12A1-208ENST00000486533 CCDC40Q4G0X9 1142 aa9.75□□□□□ -0.85
COL12A1-208ENST00000486533 TMEM119Q4V9L6 283 aa9.75□□□□□ -0.85
COL12A1-208ENST00000486533 MIIPQ5JXC2 388 aa9.75□□□□□ -0.85
COL12A1-208ENST00000486533 ALS2CLQ60I27 953 aa9.75□□□□□ -0.85
COL12A1-208ENST00000486533 EFCAB12Q6NXP0 572 aa9.75□□□□□ -0.85
COL12A1-208ENST00000486533 CMTR2Q8IYT2 770 aaKnown RBP9.75□□□□□ -0.85
COL12A1-208ENST00000486533 NOA1Q8NC60 698 aaKnown RBP9.75□□□□□ -0.85
COL12A1-208ENST00000486533 ERMNQ8TAM6 284 aa9.75□□□□□ -0.85
COL12A1-208ENST00000486533 FAM76AQ8TAV0 307 aa9.75□□□□□ -0.85
COL12A1-208ENST00000486533 DDX12PQ92771 950 aa9.75□□□□□ -0.85
COL12A1-208ENST00000486533 CLP1Q92989 425 aaKnown RBP9.75□□□□□ -0.85
COL12A1-208ENST00000486533 ADAM2Q99965 735 aa9.75□□□□□ -0.85
COL12A1-208ENST00000486533 ERVK-5Q9HDB9 667 aa9.75□□□□□ -0.85
COL12A1-208ENST00000486533 SEPT9Q9UHD8 586 aaPredicted RBP9.75□□□□□ -0.85
COL12A1-208ENST00000486533 ST3GAL5Q9UNP4 418 aa9.75□□□□□ -0.85
COL12A1-208ENST00000486533 PCDHB7Q9Y5E2 793 aa9.75□□□□□ -0.85
COL12A1-208ENST00000486533 PCDHA13Q9Y5I0 950 aa9.75□□□□□ -0.85
COL12A1-208ENST00000486533 COL4A3BPQ9Y5P4 624 aa9.75□□□□□ -0.85
COL12A1-208ENST00000486533 MRPL42Q9Y6G3 142 aaKnown RBP9.75□□□□□ -0.85
COL12A1-208ENST00000486533 KIAA1671Q9BY89 1806 aa9.74□□□□□ -0.85
COL12A1-208ENST00000486533 GOLGA6BA6NDN3 693 aa9.74□□□□□ -0.85
COL12A1-208ENST00000486533 C5orf67F2Z3F1 127 aa9.74□□□□□ -0.85
COL12A1-208ENST00000486533 TULP2O00295 520 aa9.74□□□□□ -0.85
COL12A1-208ENST00000486533 GRM6O15303 877 aa9.74□□□□□ -0.85
COL12A1-208ENST00000486533 MGEA5O60502 916 aa9.74□□□□□ -0.85
COL12A1-208ENST00000486533 GPR32O75388 356 aa9.74□□□□□ -0.85
COL12A1-208ENST00000486533 SERPING1P05155 500 aa9.74□□□□□ -0.85
COL12A1-208ENST00000486533 LINC00271P0C7V0 271 aa9.74□□□□□ -0.85
COL12A1-208ENST00000486533 MAGEA1P43355 309 aa9.74□□□□□ -0.85
COL12A1-208ENST00000486533 GATMP50440 423 aa9.74□□□□□ -0.85
COL12A1-208ENST00000486533 NLRP11P59045 1033 aaKnown RBP9.74□□□□□ -0.85
COL12A1-208ENST00000486533 STK4Q13043 487 aa9.74□□□□□ -0.85
COL12A1-208ENST00000486533 CFAP221Q4G0U5 840 aa9.74□□□□□ -0.85
COL12A1-208ENST00000486533 TCEAL5Q5H9L2 206 aa9.74□□□□□ -0.85
COL12A1-208ENST00000486533 SFMBT2Q5VUG0 894 aa9.74□□□□□ -0.85
COL12A1-208ENST00000486533 HAUS3Q68CZ6 603 aa9.74□□□□□ -0.85
COL12A1-208ENST00000486533 PDXDC1Q6P996 788 aa9.74□□□□□ -0.85
COL12A1-208ENST00000486533 MOXD1Q6UVY6 613 aa9.74□□□□□ -0.85
COL12A1-208ENST00000486533 SLC24A5Q71RS6 500 aa9.74□□□□□ -0.85
COL12A1-208ENST00000486533 FAM228AQ86W67 206 aa9.74□□□□□ -0.85
COL12A1-208ENST00000486533 CRIPAKQ8N1N5 446 aa9.74□□□□□ -0.85
COL12A1-208ENST00000486533 RDM1Q8NG50 284 aa9.74□□□□□ -0.85
COL12A1-208ENST00000486533 ETNPPLQ8TBG4 499 aa9.74□□□□□ -0.85
COL12A1-208ENST00000486533 ZNF668Q96K58 619 aaPredicted RBP9.74□□□□□ -0.85
COL12A1-208ENST00000486533 MTMR9Q96QG7 549 aa9.74□□□□□ -0.85
COL12A1-208ENST00000486533 NSUN3Q9H649 340 aaKnown RBP9.74□□□□□ -0.85
COL12A1-208ENST00000486533 MMRN2Q9H8L6 949 aa9.74□□□□□ -0.85
COL12A1-208ENST00000486533 ALG13Q9NP73 1137 aaKnown RBP9.74□□□□□ -0.85
COL12A1-208ENST00000486533 C1orf112Q9NSG2 853 aa9.74□□□□□ -0.85
COL12A1-208ENST00000486533 HPCAL4Q9UM19 191 aa9.74□□□□□ -0.85
COL12A1-208ENST00000486533 FAN1Q9Y2M0 1017 aa9.74□□□□□ -0.85
COL12A1-208ENST00000486533 DAAM1Q9Y4D1 1078 aa9.74□□□□□ -0.85
COL12A1-208ENST00000486533 BZW2Q9Y6E2 419 aaKnown RBP9.74□□□□□ -0.85
COL12A1-208ENST00000486533 ATG2AQ2TAZ0 1938 aa9.73□□□□□ -0.85
COL12A1-208ENST00000486533 MACROD2A1Z1Q3 448 aa9.73□□□□□ -0.85
COL12A1-208ENST00000486533 TMEM150BA6NC51 233 aa9.73□□□□□ -0.85
COL12A1-208ENST00000486533 CES2O00748 559 aa9.73□□□□□ -0.85
COL12A1-208ENST00000486533 SLC37A4O43826 429 aa9.73□□□□□ -0.85
COL12A1-208ENST00000486533 HSF2BPO75031 334 aa9.73□□□□□ -0.85
COL12A1-208ENST00000486533 RNF40O75150 1001 aa9.73□□□□□ -0.85
COL12A1-208ENST00000486533 MTERF2Q49AM1 385 aa9.73□□□□□ -0.85
COL12A1-208ENST00000486533 FAM26FQ5R3K3 315 aa9.73□□□□□ -0.85
COL12A1-208ENST00000486533 HYIQ5T013 277 aa9.73□□□□□ -0.85
COL12A1-208ENST00000486533 SPOUT1Q5T280 376 aaKnown RBP9.73□□□□□ -0.85
COL12A1-208ENST00000486533 VPS36Q86VN1 386 aa9.73□□□□□ -0.85
COL12A1-208ENST00000486533 IFT20Q8IY31 132 aa9.73□□□□□ -0.85
COL12A1-208ENST00000486533 SLFN12Q8IYM2 578 aa9.73□□□□□ -0.85
COL12A1-208ENST00000486533 KIAA0895Q8NCT3 520 aa9.73□□□□□ -0.85
COL12A1-208ENST00000486533 NLRP7Q8WX94 980 aa9.73□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms