RNA–Protein interactions for RNA: ENST00000486532.5

R3HDM1-217, Transcript of R3H domain containing 1, humanhuman

TSL 5

Gene R3HDM1, Length 630 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-217ENST00000486532 CTR9Q6PD62 1173 aa4.83□□□□□ -1.64
R3HDM1-217ENST00000486532 LMBR1LQ6UX01 489 aa4.83□□□□□ -1.64
R3HDM1-217ENST00000486532 SPATA31D4Q6ZUB0 917 aa4.83□□□□□ -1.64
R3HDM1-217ENST00000486532 GLB1L2Q8IW92 636 aa4.83□□□□□ -1.64
R3HDM1-217ENST00000486532 SUGP1Q8IWZ8 645 aaKnown RBP4.83□□□□□ -1.64
R3HDM1-217ENST00000486532 IQCF2Q8IXL9 164 aa4.83□□□□□ -1.64
R3HDM1-217ENST00000486532 OR52N2Q8NGI0 321 aa4.83□□□□□ -1.64
R3HDM1-217ENST00000486532 RTF1Q92541 710 aaKnown RBP4.83□□□□□ -1.64
R3HDM1-217ENST00000486532 MAP3K14Q99558 947 aa4.83□□□□□ -1.64
R3HDM1-217ENST00000486532 CCDC94Q9BW85 323 aaPredicted RBP4.83□□□□□ -1.64
R3HDM1-217ENST00000486532 CHST12Q9NRB3 414 aa4.83□□□□□ -1.64
R3HDM1-217ENST00000486532 ING3Q9NXR8 418 aa4.83□□□□□ -1.64
R3HDM1-217ENST00000486532 CPSF2Q9P2I0 782 aaKnown RBP4.83□□□□□ -1.64
R3HDM1-217ENST00000486532 SLC45A1Q9Y2W3 748 aa4.83□□□□□ -1.64
R3HDM1-217ENST00000486532 COL4A3Q01955 1670 aa4.83□□□□□ -1.64
R3HDM1-217ENST00000486532 A0A0A6YYK5 440 aaPredicted RBP4.82□□□□□ -1.64
R3HDM1-217ENST00000486532 ALG1L2C9J202 215 aa4.82□□□□□ -1.64
R3HDM1-217ENST00000486532 CPLX1O14810 134 aa4.82□□□□□ -1.64
R3HDM1-217ENST00000486532 KIF20AO95235 890 aa4.82□□□□□ -1.64
R3HDM1-217ENST00000486532 IPO7O95373 1038 aaKnown RBP4.82□□□□□ -1.64
R3HDM1-217ENST00000486532 F2P00734 622 aa4.82□□□□□ -1.64
R3HDM1-217ENST00000486532 IFIT2P09913 472 aaKnown RBP4.82□□□□□ -1.64
R3HDM1-217ENST00000486532 CD38P28907 300 aa4.82□□□□□ -1.64
R3HDM1-217ENST00000486532 TSPAN7P41732 249 aa4.82□□□□□ -1.64
R3HDM1-217ENST00000486532 KPNA1P52294 538 aaPredicted RBP4.82□□□□□ -1.64
R3HDM1-217ENST00000486532 NUCB1Q02818 461 aa4.82□□□□□ -1.64
R3HDM1-217ENST00000486532 PABPC4Q13310 644 aaKnown RBP eCLIP4.82□□□□□ -1.64
R3HDM1-217ENST00000486532 TCEA2Q15560 299 aa4.82□□□□□ -1.64
R3HDM1-217ENST00000486532 DNTTIP2Q5QJE6 756 aaKnown RBP4.82□□□□□ -1.64
R3HDM1-217ENST00000486532 ARMC6Q6NXE6 501 aa4.82□□□□□ -1.64
R3HDM1-217ENST00000486532 SYCE2Q6PIF2 218 aa4.82□□□□□ -1.64
R3HDM1-217ENST00000486532 MMS22LQ6ZRQ5 1243 aa4.82□□□□□ -1.64
R3HDM1-217ENST00000486532 PRIMA1Q86XR5 153 aa4.82□□□□□ -1.64
R3HDM1-217ENST00000486532 HOMER1Q86YM7 354 aa4.82□□□□□ -1.64
R3HDM1-217ENST00000486532 PLXDC1Q8IUK5 500 aa4.82□□□□□ -1.64
R3HDM1-217ENST00000486532 VRK3Q8IV63 474 aa4.82□□□□□ -1.64
R3HDM1-217ENST00000486532 AHI1Q8N157 1196 aa4.82□□□□□ -1.64
R3HDM1-217ENST00000486532 LCORLQ8N3X6 602 aa4.82□□□□□ -1.64
R3HDM1-217ENST00000486532 TEX9Q8N6V9 391 aa4.82□□□□□ -1.64
R3HDM1-217ENST00000486532 CCDC191Q8NCU4 936 aa4.82□□□□□ -1.64
R3HDM1-217ENST00000486532 NELL1Q92832 810 aa4.82□□□□□ -1.64
R3HDM1-217ENST00000486532 MAP7D2Q96T17 732 aa4.82□□□□□ -1.64
R3HDM1-217ENST00000486532 SOX7Q9BT81 388 aa4.82□□□□□ -1.64
R3HDM1-217ENST00000486532 MLST8Q9BVC4 326 aa4.82□□□□□ -1.64
R3HDM1-217ENST00000486532 DDX24Q9GZR7 859 aaKnown RBP eCLIP4.82□□□□□ -1.64
R3HDM1-217ENST00000486532 PDCL3Q9H2J4 239 aa4.82□□□□□ -1.64
R3HDM1-217ENST00000486532 DHX36Q9H2U1 1008 aaKnown RBP4.82□□□□□ -1.64
R3HDM1-217ENST00000486532 ZMAT4Q9H898 229 aa4.82□□□□□ -1.64
R3HDM1-217ENST00000486532 RIC8AQ9NPQ8 531 aa4.82□□□□□ -1.64
R3HDM1-217ENST00000486532 TMEM260Q9NX78 707 aa4.82□□□□□ -1.64
R3HDM1-217ENST00000486532 SEL1LQ9UBV2 794 aa4.82□□□□□ -1.64
R3HDM1-217ENST00000486532 SUN2Q9UH99 717 aa4.82□□□□□ -1.64
R3HDM1-217ENST00000486532 XPO7Q9UIA9 1087 aaKnown RBP4.82□□□□□ -1.64
R3HDM1-217ENST00000486532 TMEM110-MUSTN1A8MSY1 372 aa4.81□□□□□ -1.64
R3HDM1-217ENST00000486532 STC2O76061 302 aa4.81□□□□□ -1.64
R3HDM1-217ENST00000486532 SEC24DO94855 1032 aaPredicted RBP4.81□□□□□ -1.64
R3HDM1-217ENST00000486532 LY86O95711 162 aa4.81□□□□□ -1.64
R3HDM1-217ENST00000486532 IDEP14735 1019 aa4.81□□□□□ -1.64
R3HDM1-217ENST00000486532 ATP2A2P16615 1042 aaKnown RBP4.81□□□□□ -1.64
R3HDM1-217ENST00000486532 LSP1P33241 339 aa4.81□□□□□ -1.64
R3HDM1-217ENST00000486532 BMPR1AP36894 532 aa4.81□□□□□ -1.64
R3HDM1-217ENST00000486532 NEK4P51957 841 aa4.81□□□□□ -1.64
R3HDM1-217ENST00000486532 PHC1P78364 1004 aa4.81□□□□□ -1.64
R3HDM1-217ENST00000486532 MRPS21P82921 87 aaKnown RBP4.81□□□□□ -1.64
R3HDM1-217ENST00000486532 MEF2AQ02078 507 aaPredicted RBP4.81□□□□□ -1.64
R3HDM1-217ENST00000486532 CD69Q07108 199 aa4.81□□□□□ -1.64
R3HDM1-217ENST00000486532 STK3Q13188 491 aa4.81□□□□□ -1.64
R3HDM1-217ENST00000486532 SQSTM1Q13501 440 aa4.81□□□□□ -1.64
R3HDM1-217ENST00000486532 SPECC1Q5M775 1068 aa4.81□□□□□ -1.64
R3HDM1-217ENST00000486532 PPP4R3AQ6IN85 833 aa4.81□□□□□ -1.64
R3HDM1-217ENST00000486532 DRICH1Q6PGQ1 229 aaPredicted RBP4.81□□□□□ -1.64
R3HDM1-217ENST00000486532 C16orf87Q6PH81 154 aa4.81□□□□□ -1.64
R3HDM1-217ENST00000486532 KSR2Q6VAB6 950 aa4.81□□□□□ -1.64
R3HDM1-217ENST00000486532 PDZD4Q76G19 769 aaPredicted RBP4.81□□□□□ -1.64
R3HDM1-217ENST00000486532 GDF7Q7Z4P5 450 aa4.81□□□□□ -1.64
R3HDM1-217ENST00000486532 MTERF4Q7Z6M4 381 aaKnown RBP4.81□□□□□ -1.64
R3HDM1-217ENST00000486532 RAVER1Q8IY67 606 aaKnown RBP4.81□□□□□ -1.64
R3HDM1-217ENST00000486532 CCAR2Q8N163 923 aaKnown RBP4.81□□□□□ -1.64
R3HDM1-217ENST00000486532 MYO1HQ8N1T3 1032 aa4.81□□□□□ -1.64
R3HDM1-217ENST00000486532 ENAHQ8N8S7 591 aaPredicted RBP4.81□□□□□ -1.64
R3HDM1-217ENST00000486532 PIK3C3Q8NEB9 887 aa4.81□□□□□ -1.64
R3HDM1-217ENST00000486532 SH3TC2Q8TF17 1288 aa4.81□□□□□ -1.64
R3HDM1-217ENST00000486532 GAB3Q8WWW8 586 aa4.81□□□□□ -1.64
R3HDM1-217ENST00000486532 N4BP2L2Q92802 583 aaPredicted RBP4.81□□□□□ -1.64
R3HDM1-217ENST00000486532 CENPTQ96BT3 561 aa4.81□□□□□ -1.64
R3HDM1-217ENST00000486532 TBC1D31Q96DN5 1066 aa4.81□□□□□ -1.64
R3HDM1-217ENST00000486532 COQ10AQ96MF6 247 aa4.81□□□□□ -1.64
R3HDM1-217ENST00000486532 SPAG5Q96R06 1193 aa4.81□□□□□ -1.64
R3HDM1-217ENST00000486532 HERPUD2Q9BSE4 406 aa4.81□□□□□ -1.64
R3HDM1-217ENST00000486532 COMMD8Q9NX08 183 aa4.81□□□□□ -1.64
R3HDM1-217ENST00000486532 CHCHD3Q9NX63 227 aaKnown RBP4.81□□□□□ -1.64
R3HDM1-217ENST00000486532 TRPM5Q9NZQ8 1165 aa4.81□□□□□ -1.64
R3HDM1-217ENST00000486532 EPS15L1Q9UBC2 864 aa4.81□□□□□ -1.64
R3HDM1-217ENST00000486532 MSRAQ9UJ68 235 aa4.81□□□□□ -1.64
R3HDM1-217ENST00000486532 NUMBLQ9Y6R0 609 aa4.81□□□□□ -1.64
R3HDM1-217ENST00000486532 CFAP65Q6ZU64 1925 aaKnown RBP4.81□□□□□ -1.64
R3HDM1-217ENST00000486532 GRID2IPA4D2P6 1211 aa4.8□□□□□ -1.64
R3HDM1-217ENST00000486532 B5MCH6 92 aa4.8□□□□□ -1.64
R3HDM1-217ENST00000486532 ALDH1L1O75891 902 aa4.8□□□□□ -1.64
R3HDM1-217ENST00000486532 ASMTLO95671 621 aa4.8□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms