RNA–Protein interactions for RNA: ENST00000486530.1

HPS3-206, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 5

Gene HPS3, Length 1,894 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-206ENST00000486530 CAVIN3Q969G5 261 aa21.8■■□□□ 1.08
HPS3-206ENST00000486530 RNPC3Q96LT9 517 aaKnown RBP21.8■■□□□ 1.08
HPS3-206ENST00000486530 AP1M1Q9BXS5 423 aa21.8■■□□□ 1.08
HPS3-206ENST00000486530 INO80BQ9C086 356 aaPredicted RBP21.8■■□□□ 1.08
HPS3-206ENST00000486530 EPB41L5Q9HCM4 733 aa21.8■■□□□ 1.08
HPS3-206ENST00000486530 PTPRHQ9HD43 1115 aa21.8■■□□□ 1.08
HPS3-206ENST00000486530 CNTN6Q9UQ52 1028 aa21.8■■□□□ 1.08
HPS3-206ENST00000486530 PASKQ96RG2 1323 aa21.8■■□□□ 1.08
HPS3-206ENST00000486530 MAGEB2O15479 319 aa21.79■■□□□ 1.08
HPS3-206ENST00000486530 SNAI1O95863 264 aaPredicted RBP21.79■■□□□ 1.08
HPS3-206ENST00000486530 MBTD1Q05BQ5 628 aa21.79■■□□□ 1.08
HPS3-206ENST00000486530 POU5F1BQ06416 359 aa21.79■■□□□ 1.08
HPS3-206ENST00000486530 NNTQ13423 1086 aa21.79■■□□□ 1.08
HPS3-206ENST00000486530 ZNF568Q3ZCX4 644 aa21.79■■□□□ 1.08
HPS3-206ENST00000486530 GJC2Q5T442 439 aaPredicted RBP21.79■■□□□ 1.08
HPS3-206ENST00000486530 TRIM72Q6ZMU5 477 aa21.79■■□□□ 1.08
HPS3-206ENST00000486530 ZSWIM1Q9BR11 485 aa21.79■■□□□ 1.08
HPS3-206ENST00000486530 SLITRK6Q9H5Y7 841 aa21.79■■□□□ 1.08
HPS3-206ENST00000486530 CPA4Q9UI42 421 aa21.79■■□□□ 1.08
HPS3-206ENST00000486530 NUB1Q9Y5A7 615 aa21.79■■□□□ 1.08
HPS3-206ENST00000486530 PCDHB4Q9Y5E5 795 aa21.79■■□□□ 1.08
HPS3-206ENST00000486530 POLR3GO15318 223 aaPredicted RBP21.79■■□□□ 1.08
HPS3-206ENST00000486530 FGGP02679 453 aa21.79■■□□□ 1.08
HPS3-206ENST00000486530 GJB1P08034 283 aa21.79■■□□□ 1.08
HPS3-206ENST00000486530 MYBL1P10243 752 aa21.79■■□□□ 1.08
HPS3-206ENST00000486530 INSRRP14616 1297 aa21.79■■□□□ 1.08
HPS3-206ENST00000486530 MESDQ14696 234 aa21.79■■□□□ 1.08
HPS3-206ENST00000486530 SND1Q7KZF4 910 aaKnown RBP eCLIP21.79■■□□□ 1.08
HPS3-206ENST00000486530 DPP9Q86TI2 863 aa21.79■■□□□ 1.08
HPS3-206ENST00000486530 WNT8AQ9H1J5 351 aa21.79■■□□□ 1.08
HPS3-206ENST00000486530 ZCCHC17Q9NP64 241 aaKnown RBP21.79■■□□□ 1.08
HPS3-206ENST00000486530 CNOT8Q9UFF9 292 aaKnown RBP21.79■■□□□ 1.08
HPS3-206ENST00000486530 MGAMO43451 1857 aa21.78■■□□□ 1.08
HPS3-206ENST00000486530 TMEM110-MUSTN1A8MSY1 372 aa21.78■■□□□ 1.08
HPS3-206ENST00000486530 CLSTN1O94985 981 aa21.78■■□□□ 1.08
HPS3-206ENST00000486530 ASS1P00966 412 aaKnown RBP21.78■■□□□ 1.08
HPS3-206ENST00000486530 COMTP21964 271 aa21.78■■□□□ 1.08
HPS3-206ENST00000486530 ADCYAP1R1P41586 468 aa21.78■■□□□ 1.08
HPS3-206ENST00000486530 PHKA2P46019 1235 aa21.78■■□□□ 1.08
HPS3-206ENST00000486530 PPP2R5EQ16537 467 aa21.78■■□□□ 1.08
HPS3-206ENST00000486530 DUOXA2Q1HG44 320 aa21.78■■□□□ 1.08
HPS3-206ENST00000486530 TMEM132AQ24JP5 1023 aa21.78■■□□□ 1.08
HPS3-206ENST00000486530 FAM71BQ8TC56 605 aa21.78■■□□□ 1.08
HPS3-206ENST00000486530 AFG1LQ8WV93 481 aa21.78■■□□□ 1.08
HPS3-206ENST00000486530 CCDC102AQ96A19 550 aa21.78■■□□□ 1.08
HPS3-206ENST00000486530 GDAP1L1Q96MZ0 367 aa21.78■■□□□ 1.08
HPS3-206ENST00000486530 MTMR12Q9C0I1 747 aa21.78■■□□□ 1.08
HPS3-206ENST00000486530 AVENQ9NQS1 362 aaPredicted RBP21.78■■□□□ 1.08
HPS3-206ENST00000486530 PRMT7Q9NVM4 692 aaPredicted RBP21.78■■□□□ 1.08
HPS3-206ENST00000486530 TNFSF13BQ9Y275 285 aa21.78■■□□□ 1.08
HPS3-206ENST00000486530 SART1O43290 800 aaKnown RBP21.77■■□□□ 1.08
HPS3-206ENST00000486530 CYP1A1P04798 512 aaPredicted RBP21.77■■□□□ 1.08
HPS3-206ENST00000486530 IGBP1P78318 339 aa21.77■■□□□ 1.08
HPS3-206ENST00000486530 CENPCQ03188 943 aa21.77■■□□□ 1.08
HPS3-206ENST00000486530 SMYD5Q6GMV2 418 aa21.77■■□□□ 1.08
HPS3-206ENST00000486530 PPP1R2P3Q6NXS1 205 aa21.77■■□□□ 1.08
HPS3-206ENST00000486530 TMEM270Q6UE05 265 aa21.77■■□□□ 1.08
HPS3-206ENST00000486530 LINC01465Q8N7H1 131 aa21.77■■□□□ 1.08
HPS3-206ENST00000486530 EIF1ADQ8N9N8 165 aaKnown RBP21.77■■□□□ 1.08
HPS3-206ENST00000486530 RBBP8NLQ8NC74 664 aaPredicted RBP21.77■■□□□ 1.08
HPS3-206ENST00000486530 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP21.77■■□□□ 1.085e-8■■■■■ 65.3
HPS3-206ENST00000486530 ALG3Q92685 438 aa21.77■■□□□ 1.08
HPS3-206ENST00000486530 MAML3Q96JK9 1138 aa21.77■■□□□ 1.08
HPS3-206ENST00000486530 GOLGA6L10A0A0M3HER8 536 aa21.77■■□□□ 1.08
HPS3-206ENST00000486530 SLC15A5A6NIM6 579 aa21.77■■□□□ 1.08
HPS3-206ENST00000486530 CALCAP01258 141 aa21.77■■□□□ 1.08
HPS3-206ENST00000486530 GNA15P30679 374 aa21.77■■□□□ 1.08
HPS3-206ENST00000486530 NSFP46459 744 aaKnown RBP21.77■■□□□ 1.08
HPS3-206ENST00000486530 FAM187BQ17R55 369 aa21.77■■□□□ 1.08
HPS3-206ENST00000486530 IFNLR1Q8IU57 520 aaPredicted RBP21.77■■□□□ 1.08
HPS3-206ENST00000486530 MCOLN2Q8IZK6 566 aa21.77■■□□□ 1.08
HPS3-206ENST00000486530 CCDC26Q8TAB7 109 aa21.77■■□□□ 1.08
HPS3-206ENST00000486530 CD101Q93033 1021 aa21.77■■□□□ 1.08
HPS3-206ENST00000486530 DDX47Q9H0S4 455 aaKnown RBP21.77■■□□□ 1.08
HPS3-206ENST00000486530 CHORDC1Q9UHD1 332 aaPredicted RBP21.77■■□□□ 1.08
HPS3-206ENST00000486530 UMODL1Q5DID0 1318 aa21.76■■□□□ 1.07
HPS3-206ENST00000486530 ZSCAN5CA6NGD5 496 aaPredicted RBP21.76■■□□□ 1.07
HPS3-206ENST00000486530 B4GALT5O43286 388 aa21.76■■□□□ 1.07
HPS3-206ENST00000486530 PPFIA4O75335 1185 aa21.76■■□□□ 1.07
HPS3-206ENST00000486530 SLC10A3P09131 477 aa21.76■■□□□ 1.07
HPS3-206ENST00000486530 HOXC6P09630 235 aa21.76■■□□□ 1.07
HPS3-206ENST00000486530 CARSP49589 748 aaKnown RBP21.76■■□□□ 1.07
HPS3-206ENST00000486530 MAATS1Q7Z4T9 603 aa21.76■■□□□ 1.07
HPS3-206ENST00000486530 UBR7Q8N806 425 aa21.76■■□□□ 1.07
HPS3-206ENST00000486530 NPLOC4Q8TAT6 608 aa21.76■■□□□ 1.07
HPS3-206ENST00000486530 CASKIN2Q8WXE0 1202 aa21.76■■□□□ 1.07
HPS3-206ENST00000486530 ZBTB10Q96DT7 871 aa21.76■■□□□ 1.07
HPS3-206ENST00000486530 FAM212AQ96EL1 285 aa21.76■■□□□ 1.07
HPS3-206ENST00000486530 KAT6AQ92794 2004 aa21.75■■□□□ 1.07
HPS3-206ENST00000486530 CCDC66A2RUB6 948 aa21.75■■□□□ 1.07
HPS3-206ENST00000486530 KIF3CO14782 793 aa21.75■■□□□ 1.07
HPS3-206ENST00000486530 SPOPO43791 374 aa21.75■■□□□ 1.07
HPS3-206ENST00000486530 B4GALT4O60513 344 aa21.75■■□□□ 1.07
HPS3-206ENST00000486530 TMEM191BP0C7N4 346 aa21.75■■□□□ 1.07
HPS3-206ENST00000486530 ZNF286BP0CG31 522 aa21.75■■□□□ 1.07
HPS3-206ENST00000486530 ITGA4P13612 1032 aa21.75■■□□□ 1.07
HPS3-206ENST00000486530 HSPA6P17066 643 aa21.75■■□□□ 1.07
HPS3-206ENST00000486530 CTNNA2P26232 953 aa21.75■■□□□ 1.07
HPS3-206ENST00000486530 SGSM1Q2NKQ1 1148 aa21.75■■□□□ 1.07
HPS3-206ENST00000486530 NAA35Q5VZE5 725 aa21.75■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms