RNA–Protein interactions for RNA: ENST00000486100.1

PRPF40A-209, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 4

Gene PRPF40A, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-209ENST00000486100 TNFSF9P41273 254 aa20.06■□□□□ 0.8
PRPF40A-209ENST00000486100 MTMR3Q13615 1198 aa20.06■□□□□ 0.8
PRPF40A-209ENST00000486100 ZBTB6Q15916 424 aa20.06■□□□□ 0.8
PRPF40A-209ENST00000486100 ZC2HC1CQ53FD0 456 aaPredicted RBP20.06■□□□□ 0.8
PRPF40A-209ENST00000486100 RSPO2Q6UXX9 243 aaPredicted RBP20.06■□□□□ 0.8
PRPF40A-209ENST00000486100 DNAJC19Q96DA6 116 aa20.06■□□□□ 0.8
PRPF40A-209ENST00000486100 ASIC4Q96FT7 647 aa20.06■□□□□ 0.8
PRPF40A-209ENST00000486100 TSPAN18Q96SJ8 248 aa20.06■□□□□ 0.8
PRPF40A-209ENST00000486100 MSTO1Q9BUK6 570 aa20.06■□□□□ 0.8
PRPF40A-209ENST00000486100 RPF1Q9H9Y2 349 aaKnown RBP20.06■□□□□ 0.8
PRPF40A-209ENST00000486100 SEL1LQ9UBV2 794 aa20.06■□□□□ 0.8
PRPF40A-209ENST00000486100 NUB1Q9Y5A7 615 aa20.06■□□□□ 0.8
PRPF40A-209ENST00000486100 GTF3C5Q9Y5Q8 519 aaPredicted RBP20.06■□□□□ 0.8
PRPF40A-209ENST00000486100 A0A087X0B3 334 aa20.05■□□□□ 0.8
PRPF40A-209ENST00000486100 LACTBL1A8MY62 500 aa20.05■□□□□ 0.8
PRPF40A-209ENST00000486100 SYN3O14994 580 aa20.05■□□□□ 0.8
PRPF40A-209ENST00000486100 PPP6R2O75170 966 aa20.05■□□□□ 0.8
PRPF40A-209ENST00000486100 ASGR2P07307 311 aa20.05■□□□□ 0.8
PRPF40A-209ENST00000486100 ADRB2P07550 413 aa20.05■□□□□ 0.8
PRPF40A-209ENST00000486100 HNRNPA1P09651 372 aaKnown RBP eCLIP20.05■□□□□ 0.8
PRPF40A-209ENST00000486100 CYP3A5P20815 502 aa20.05■□□□□ 0.8
PRPF40A-209ENST00000486100 STAT6P42226 847 aa20.05■□□□□ 0.8
PRPF40A-209ENST00000486100 PPP2R3AQ06190 1150 aa20.05■□□□□ 0.8
PRPF40A-209ENST00000486100 UVSSAQ2YD98 709 aa20.05■□□□□ 0.8
PRPF40A-209ENST00000486100 LIN9Q5TKA1 542 aa20.05■□□□□ 0.8
PRPF40A-209ENST00000486100 SLC39A4Q6P5W5 647 aa20.05■□□□□ 0.8
PRPF40A-209ENST00000486100 SFR1Q86XK3 245 aa20.05■□□□□ 0.8
PRPF40A-209ENST00000486100 KIF12Q96FN5 646 aa20.05■□□□□ 0.8
PRPF40A-209ENST00000486100 TUBGCP4Q9UGJ1 667 aa20.05■□□□□ 0.8
PRPF40A-209ENST00000486100 UBQLN1Q9UMX0 589 aaKnown RBP20.05■□□□□ 0.8
PRPF40A-209ENST00000486100 CDY1Q9Y6F8 540 aa20.05■□□□□ 0.8
PRPF40A-209ENST00000486100 CLUHO75153 1309 aa20.04■□□□□ 0.8
PRPF40A-209ENST00000486100 ANKRD63C9JTQ0 380 aa20.04■□□□□ 0.8
PRPF40A-209ENST00000486100 N4BP1O75113 896 aaKnown RBP20.04■□□□□ 0.8
PRPF40A-209ENST00000486100 YEATS4O95619 227 aa20.04■□□□□ 0.8
PRPF40A-209ENST00000486100 C8AP07357 584 aa20.04■□□□□ 0.8
PRPF40A-209ENST00000486100 GAP43P17677 238 aa20.04■□□□□ 0.8
PRPF40A-209ENST00000486100 LRPAP1P30533 357 aa20.04■□□□□ 0.8
PRPF40A-209ENST00000486100 HOXA9P31269 272 aa20.04■□□□□ 0.8
PRPF40A-209ENST00000486100 SPAG1Q07617 926 aa20.04■□□□□ 0.8
PRPF40A-209ENST00000486100 MRPL58Q14197 206 aaKnown RBP20.04■□□□□ 0.8
PRPF40A-209ENST00000486100 ENOX2Q16206 610 aaKnown RBP20.04■□□□□ 0.8
PRPF40A-209ENST00000486100 PPM1LQ5SGD2 360 aa20.04■□□□□ 0.8
PRPF40A-209ENST00000486100 VARS2Q5ST30 1063 aaKnown RBP20.04■□□□□ 0.8
PRPF40A-209ENST00000486100 ZBTB41Q5SVQ8 909 aa20.04■□□□□ 0.8
PRPF40A-209ENST00000486100 AXDND1Q5T1B0 1012 aaPredicted RBP20.04■□□□□ 0.8
PRPF40A-209ENST00000486100 SLFN12LQ6IEE8 588 aa20.04■□□□□ 0.8
PRPF40A-209ENST00000486100 RTL10Q7L3V2 364 aa20.04■□□□□ 0.8
PRPF40A-209ENST00000486100 CD302Q8IX05 232 aa20.04■□□□□ 0.8
PRPF40A-209ENST00000486100 HVCN1Q96D96 273 aa20.04■□□□□ 0.8
PRPF40A-209ENST00000486100 SUSD3Q96L08 255 aa20.04■□□□□ 0.8
PRPF40A-209ENST00000486100 STRA6Q9BX79 667 aa20.04■□□□□ 0.8
PRPF40A-209ENST00000486100 CPSF3Q9UKF6 684 aaKnown RBP20.04■□□□□ 0.8
PRPF40A-209ENST00000486100 STYXL1Q9Y6J8 313 aa20.04■□□□□ 0.8
PRPF40A-209ENST00000486100 H7C4K7 107 aa20.03■□□□□ 0.8
PRPF40A-209ENST00000486100 XPOTO43592 962 aaKnown RBP20.03■□□□□ 0.8
PRPF40A-209ENST00000486100 TBC1D4O60343 1298 aa20.03■□□□□ 0.8
PRPF40A-209ENST00000486100 ZSCAN22P10073 491 aaPredicted RBP20.03■□□□□ 0.8
PRPF40A-209ENST00000486100 GBP2P32456 591 aaPredicted RBP20.03■□□□□ 0.8
PRPF40A-209ENST00000486100 MCM4P33991 863 aa20.03■□□□□ 0.8
PRPF40A-209ENST00000486100 FOXD4L5Q5VV16 416 aaPredicted RBP20.03■□□□□ 0.8
PRPF40A-209ENST00000486100 SLC8B1Q6J4K2 584 aa20.03■□□□□ 0.8
PRPF40A-209ENST00000486100 PDILTQ8N807 584 aa20.03■□□□□ 0.8
PRPF40A-209ENST00000486100 FOXD4L4Q8WXT5 416 aaPredicted RBP20.03■□□□□ 0.8
PRPF40A-209ENST00000486100 KCNH6Q9H252 994 aa20.03■□□□□ 0.8
PRPF40A-209ENST00000486100 MRPL44Q9H9J2 332 aaKnown RBP20.03■□□□□ 0.8
PRPF40A-209ENST00000486100 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP20.03■□□□□ 0.8
PRPF40A-209ENST00000486100 TECTAO75443 2155 aa20.02■□□□□ 0.8
PRPF40A-209ENST00000486100 PPP1R37O75864 691 aa20.02■□□□□ 0.8
PRPF40A-209ENST00000486100 ADALQ6DHV7 355 aa20.02■□□□□ 0.8
PRPF40A-209ENST00000486100 FBXL6Q8N531 539 aa20.02■□□□□ 0.8
PRPF40A-209ENST00000486100 APPL2Q8NEU8 664 aa20.02■□□□□ 0.8
PRPF40A-209ENST00000486100 ZNF461Q8TAF7 563 aa20.02■□□□□ 0.8
PRPF40A-209ENST00000486100 FAM122AQ96E09 287 aa20.02■□□□□ 0.8
PRPF40A-209ENST00000486100 MYADMQ96S97 322 aa20.02■□□□□ 0.8
PRPF40A-209ENST00000486100 KCNK12Q9HB15 430 aa20.02■□□□□ 0.8
PRPF40A-209ENST00000486100 IGSF9Q9P2J2 1179 aa20.02■□□□□ 0.8
PRPF40A-209ENST00000486100 EPS15L1Q9UBC2 864 aa20.02■□□□□ 0.8
PRPF40A-209ENST00000486100 TRIOO75962 3097 aa20.02■□□□□ 0.8
PRPF40A-209ENST00000486100 PLXNA3P51805 1871 aa20.01■□□□□ 0.79
PRPF40A-209ENST00000486100 FRMD3A2A2Y4 597 aa20.01■□□□□ 0.79
PRPF40A-209ENST00000486100 CUTAO60888 179 aa20.01■□□□□ 0.79
PRPF40A-209ENST00000486100 XYLBO75191 536 aa20.01■□□□□ 0.79
PRPF40A-209ENST00000486100 ABLIM3O94929 683 aa20.01■□□□□ 0.79
PRPF40A-209ENST00000486100 F13A1P00488 732 aa20.01■□□□□ 0.79
PRPF40A-209ENST00000486100 POU2F2P09086 479 aa20.01■□□□□ 0.79
PRPF40A-209ENST00000486100 IDEP14735 1019 aa20.01■□□□□ 0.79
PRPF40A-209ENST00000486100 PLA2G5P39877 138 aa20.01■□□□□ 0.79
PRPF40A-209ENST00000486100 POU5F1Q01860 360 aaKnown RBP20.01■□□□□ 0.79
PRPF40A-209ENST00000486100 TDGQ13569 410 aa20.01■□□□□ 0.79
PRPF40A-209ENST00000486100 POSTNQ15063 836 aa20.01■□□□□ 0.79
PRPF40A-209ENST00000486100 SPATA1Q5VX52 437 aa20.01■□□□□ 0.79
PRPF40A-209ENST00000486100 GRASPQ7Z6J2 395 aaPredicted RBP20.01■□□□□ 0.79
PRPF40A-209ENST00000486100 SUGP1Q8IWZ8 645 aaKnown RBP20.01■□□□□ 0.79
PRPF40A-209ENST00000486100 SLC7A14Q8TBB6 771 aa20.01■□□□□ 0.79
PRPF40A-209ENST00000486100 FAM212AQ96EL1 285 aa20.01■□□□□ 0.79
PRPF40A-209ENST00000486100 ASB7Q9H672 318 aa20.01■□□□□ 0.79
PRPF40A-209ENST00000486100 OLFML3Q9NRN5 406 aa20.01■□□□□ 0.79
PRPF40A-209ENST00000486100 TBC1D7Q9P0N9 293 aa20.01■□□□□ 0.79
PRPF40A-209ENST00000486100 AGO2Q9UKV8 859 aaKnown RBP20.01■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms