RNA–Protein interactions for RNA: ENST00000485994.5

VPS50-218, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 2

Gene VPS50, Length 573 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-218ENST00000485994 GDAQ9Y2T3 454 aa7.66□□□□□ -1.18
VPS50-218ENST00000485994 NR2E1Q9Y466 385 aa7.66□□□□□ -1.18
VPS50-218ENST00000485994 SF3B1O75533 1304 aaKnown RBP eCLIP7.66□□□□□ -1.18
VPS50-218ENST00000485994 PDCD11Q14690 1871 aaKnown RBP7.66□□□□□ -1.18
VPS50-218ENST00000485994 VWA8A3KMH1 1905 aa7.66□□□□□ -1.18
VPS50-218ENST00000485994 DOCK8Q8NF50 2099 aa7.66□□□□□ -1.18
VPS50-218ENST00000485994 ZDBF2Q9HCK1 2354 aa7.66□□□□□ -1.18
VPS50-218ENST00000485994 A0A0B4J269 797 aa7.65□□□□□ -1.18
VPS50-218ENST00000485994 NPHP3-ACAD11A0A0J9YXS1 232 aa7.65□□□□□ -1.18
VPS50-218ENST00000485994 TTC26A0AVF1 554 aa7.65□□□□□ -1.18
VPS50-218ENST00000485994 PRR33A8MZF0 331 aa7.65□□□□□ -1.18
VPS50-218ENST00000485994 SPTLC2O15270 562 aa7.65□□□□□ -1.18
VPS50-218ENST00000485994 FAM13AO94988 1023 aa7.65□□□□□ -1.18
VPS50-218ENST00000485994 CSPG5O95196 566 aa7.65□□□□□ -1.18
VPS50-218ENST00000485994 EPCAMP16422 314 aa7.65□□□□□ -1.18
VPS50-218ENST00000485994 GAP43P17677 238 aa7.65□□□□□ -1.18
VPS50-218ENST00000485994 LIG1P18858 919 aa7.65□□□□□ -1.18
VPS50-218ENST00000485994 FGFR3P22607 806 aa7.65□□□□□ -1.18
VPS50-218ENST00000485994 RAD51AP2Q09MP3 1159 aa7.65□□□□□ -1.18
VPS50-218ENST00000485994 MRPL58Q14197 206 aaKnown RBP7.65□□□□□ -1.18
VPS50-218ENST00000485994 NOLC1Q14978 699 aaKnown RBP eCLIP7.65□□□□□ -1.18
VPS50-218ENST00000485994 LAPTM4AQ15012 233 aa7.65□□□□□ -1.18
VPS50-218ENST00000485994 POSTNQ15063 836 aa7.65□□□□□ -1.18
VPS50-218ENST00000485994 ZNF568Q3ZCX4 644 aa7.65□□□□□ -1.18
VPS50-218ENST00000485994 TMEM31Q5JXX7 168 aa7.65□□□□□ -1.18
VPS50-218ENST00000485994 C6orf132Q5T0Z8 1188 aa7.65□□□□□ -1.18
VPS50-218ENST00000485994 ZNF787Q6DD87 383 aa7.65□□□□□ -1.18
VPS50-218ENST00000485994 LLGL2Q6P1M3 1020 aa7.65□□□□□ -1.18
VPS50-218ENST00000485994 PDZRN4Q6ZMN7 1036 aaPredicted RBP7.65□□□□□ -1.18
VPS50-218ENST00000485994 MAP4K3Q8IVH8 894 aa7.65□□□□□ -1.18
VPS50-218ENST00000485994 HSCBQ8IWL3 235 aa7.65□□□□□ -1.18
VPS50-218ENST00000485994 ZDHHC14Q8IZN3 488 aa7.65□□□□□ -1.18
VPS50-218ENST00000485994 CEP120Q8N960 986 aa7.65□□□□□ -1.18
VPS50-218ENST00000485994 DDX12PQ92771 950 aa7.65□□□□□ -1.18
VPS50-218ENST00000485994 ZNF775Q96BV0 537 aaPredicted RBP7.65□□□□□ -1.18
VPS50-218ENST00000485994 ZMAT2Q96NC0 199 aaKnown RBP7.65□□□□□ -1.18
VPS50-218ENST00000485994 CLIC6Q96NY7 704 aa7.65□□□□□ -1.18
VPS50-218ENST00000485994 CLSTN3Q9BQT9 956 aa7.65□□□□□ -1.18
VPS50-218ENST00000485994 PAAF1Q9BRP4 392 aa7.65□□□□□ -1.18
VPS50-218ENST00000485994 LRFN3Q9BTN0 628 aa7.65□□□□□ -1.18
VPS50-218ENST00000485994 CUEDC2Q9H467 287 aa7.65□□□□□ -1.18
VPS50-218ENST00000485994 SFXN1Q9H9B4 322 aa7.65□□□□□ -1.18
VPS50-218ENST00000485994 C11orf16Q9NQ32 467 aa7.65□□□□□ -1.18
VPS50-218ENST00000485994 OLFML3Q9NRN5 406 aa7.65□□□□□ -1.18
VPS50-218ENST00000485994 KBTBD4Q9NVX7 518 aa7.65□□□□□ -1.18
VPS50-218ENST00000485994 ZDHHC7Q9NXF8 308 aa7.65□□□□□ -1.18
VPS50-218ENST00000485994 CFAP45Q9UL16 551 aa7.65□□□□□ -1.18
VPS50-218ENST00000485994 MAFFQ9ULX9 164 aa7.65□□□□□ -1.18
VPS50-218ENST00000485994 BACE2Q9Y5Z0 518 aa7.65□□□□□ -1.18
VPS50-218ENST00000485994 ZNF318Q5VUA4 2279 aa7.64□□□□□ -1.19
VPS50-218ENST00000485994 TCHHQ07283 1943 aa7.64□□□□□ -1.19
VPS50-218ENST00000485994 FRMD3A2A2Y4 597 aa7.64□□□□□ -1.19
VPS50-218ENST00000485994 MYMKA6NI61 221 aa7.64□□□□□ -1.19
VPS50-218ENST00000485994 F8W810 466 aa7.64□□□□□ -1.19
VPS50-218ENST00000485994 SYN3O14994 580 aa7.64□□□□□ -1.19
VPS50-218ENST00000485994 OGTO15294 1046 aa7.64□□□□□ -1.19
VPS50-218ENST00000485994 MEFVO15553 781 aaPredicted RBP7.64□□□□□ -1.19
VPS50-218ENST00000485994 TGM5O43548 720 aa7.64□□□□□ -1.19
VPS50-218ENST00000485994 FAM189A1O60320 539 aa7.64□□□□□ -1.19
VPS50-218ENST00000485994 TBC1D4O60343 1298 aa7.64□□□□□ -1.19
VPS50-218ENST00000485994 CUTAO60888 179 aa7.64□□□□□ -1.19
VPS50-218ENST00000485994 B3GAT3O94766 335 aa7.64□□□□□ -1.19
VPS50-218ENST00000485994 KIF4AO95239 1232 aa7.64□□□□□ -1.19
VPS50-218ENST00000485994 GLUD1P00367 558 aa7.64□□□□□ -1.19
VPS50-218ENST00000485994 F13A1P00488 732 aa7.64□□□□□ -1.19
VPS50-218ENST00000485994 POU2F2P09086 479 aa7.64□□□□□ -1.19
VPS50-218ENST00000485994 ZSCAN22P10073 491 aaPredicted RBP7.64□□□□□ -1.19
VPS50-218ENST00000485994 LRPAP1P30533 357 aa7.64□□□□□ -1.19
VPS50-218ENST00000485994 HOXA9P31269 272 aa7.64□□□□□ -1.19
VPS50-218ENST00000485994 CLCNKBP51801 687 aa7.64□□□□□ -1.19
VPS50-218ENST00000485994 SOX4Q06945 474 aaPredicted RBP7.64□□□□□ -1.19
VPS50-218ENST00000485994 ALCAMQ13740 583 aa7.64□□□□□ -1.19
VPS50-218ENST00000485994 RAB33AQ14088 237 aa7.64□□□□□ -1.19
VPS50-218ENST00000485994 SPECC1Q5M775 1068 aa7.64□□□□□ -1.19
VPS50-218ENST00000485994 AXDND1Q5T1B0 1012 aaPredicted RBP7.64□□□□□ -1.19
VPS50-218ENST00000485994 FAM171A1Q5VUB5 890 aa7.64□□□□□ -1.19
VPS50-218ENST00000485994 NYAP1Q6ZVC0 841 aa7.64□□□□□ -1.19
VPS50-218ENST00000485994 ANKS3Q6ZW76 656 aa7.64□□□□□ -1.19
VPS50-218ENST00000485994 RIN2Q8WYP3 895 aaPredicted RBP7.64□□□□□ -1.19
VPS50-218ENST00000485994 NXPE3Q969Y0 559 aa7.64□□□□□ -1.19
VPS50-218ENST00000485994 OXCT2Q9BYC2 517 aaPredicted RBP7.64□□□□□ -1.19
VPS50-218ENST00000485994 HAPLN2Q9GZV7 340 aa7.64□□□□□ -1.19
VPS50-218ENST00000485994 KCNH6Q9H252 994 aa7.64□□□□□ -1.19
VPS50-218ENST00000485994 POMKQ9H5K3 350 aa7.64□□□□□ -1.19
VPS50-218ENST00000485994 ASB7Q9H672 318 aa7.64□□□□□ -1.19
VPS50-218ENST00000485994 TFIP11Q9UBB9 837 aaKnown RBP7.64□□□□□ -1.19
VPS50-218ENST00000485994 MTRRQ9UBK8 725 aa7.64□□□□□ -1.19
VPS50-218ENST00000485994 CPSF3Q9UKF6 684 aaKnown RBP7.64□□□□□ -1.19
VPS50-218ENST00000485994 RCOR1Q9UKL0 485 aa7.64□□□□□ -1.19
VPS50-218ENST00000485994 DERAQ9Y315 318 aa7.64□□□□□ -1.19
VPS50-218ENST00000485994 C2orf16Q68DN1 1984 aa7.64□□□□□ -1.19
VPS50-218ENST00000485994 MYH15Q9Y2K3 1946 aa7.64□□□□□ -1.19
VPS50-218ENST00000485994 CCDC195A0A1B0GUA6 201 aa7.63□□□□□ -1.19
VPS50-218ENST00000485994 CASTOR2A6NHX0 329 aa7.63□□□□□ -1.19
VPS50-218ENST00000485994 M0QZQ0 153 aa7.63□□□□□ -1.19
VPS50-218ENST00000485994 NRG2O14511 850 aaPredicted RBP7.63□□□□□ -1.19
VPS50-218ENST00000485994 C2CD2LO14523 706 aa7.63□□□□□ -1.19
VPS50-218ENST00000485994 XPOTO43592 962 aaKnown RBP7.63□□□□□ -1.19
VPS50-218ENST00000485994 TBCAO75347 108 aaKnown RBP7.63□□□□□ -1.19
VPS50-218ENST00000485994 ZMYND10O75800 440 aa7.63□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms