RNA–Protein interactions for RNA: ENST00000485921.5

ABCF3-216, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 2

Gene ABCF3, Length 813 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-216ENST00000485921 PDCD11Q14690 1871 aaKnown RBP25.61■■□□□ 1.69
ABCF3-216ENST00000485921 PODXLO00592 558 aa25.6■■□□□ 1.69
ABCF3-216ENST00000485921 AKAP3O75969 853 aa25.6■■□□□ 1.69
ABCF3-216ENST00000485921 TFAMQ00059 246 aaKnown RBP25.6■■□□□ 1.69
ABCF3-216ENST00000485921 SKOR2Q2VWA4 1001 aaPredicted RBP25.6■■□□□ 1.69
ABCF3-216ENST00000485921 TTI2Q6NXR4 508 aa25.6■■□□□ 1.69
ABCF3-216ENST00000485921 SASS6Q6UVJ0 657 aa25.6■■□□□ 1.69
ABCF3-216ENST00000485921 ZC3H3Q8IXZ2 948 aaKnown RBP25.6■■□□□ 1.69
ABCF3-216ENST00000485921 CACTINQ8WUQ7 758 aaKnown RBP25.6■■□□□ 1.69
ABCF3-216ENST00000485921 POF1BQ8WVV4 589 aa25.6■■□□□ 1.69
ABCF3-216ENST00000485921 GAS2L1Q99501 681 aaPredicted RBP25.6■■□□□ 1.69
ABCF3-216ENST00000485921 CDH23Q9H251 3354 aa25.59■■□□□ 1.69
ABCF3-216ENST00000485921 MAPK13O15264 365 aa25.59■■□□□ 1.69
ABCF3-216ENST00000485921 TADA2AO75478 443 aa25.59■■□□□ 1.69
ABCF3-216ENST00000485921 B3GAT3O94766 335 aa25.59■■□□□ 1.69
ABCF3-216ENST00000485921 KIF4AO95239 1232 aa25.59■■□□□ 1.69
ABCF3-216ENST00000485921 DLATP10515 647 aaKnown RBP25.59■■□□□ 1.69
ABCF3-216ENST00000485921 DNAJB1P25685 340 aa25.59■■□□□ 1.69
ABCF3-216ENST00000485921 LRPAP1P30533 357 aa25.59■■□□□ 1.69
ABCF3-216ENST00000485921 PSMC2P35998 433 aaKnown RBP25.59■■□□□ 1.69
ABCF3-216ENST00000485921 ADGRE1Q14246 886 aa25.59■■□□□ 1.69
ABCF3-216ENST00000485921 NFKBIBQ15653 356 aa25.59■■□□□ 1.69
ABCF3-216ENST00000485921 LMBRD2Q68DH5 695 aaPredicted RBP25.59■■□□□ 1.69
ABCF3-216ENST00000485921 FOXR2Q6PJQ5 311 aa25.59■■□□□ 1.69
ABCF3-216ENST00000485921 DDX53Q86TM3 631 aaKnown RBP25.59■■□□□ 1.69
ABCF3-216ENST00000485921 FAM186BQ8IYM0 893 aa25.59■■□□□ 1.69
ABCF3-216ENST00000485921 HASPINQ8TF76 798 aa25.59■■□□□ 1.69
ABCF3-216ENST00000485921 MYLIPQ8WY64 445 aa25.59■■□□□ 1.69
ABCF3-216ENST00000485921 DUSP9Q99956 384 aaKnown RBP25.59■■□□□ 1.69
ABCF3-216ENST00000485921 LMAN2LQ9H0V9 348 aa25.59■■□□□ 1.69
ABCF3-216ENST00000485921 DPP3Q9NY33 737 aa25.59■■□□□ 1.69
ABCF3-216ENST00000485921 DACH1Q9UI36 760 aa25.59■■□□□ 1.69
ABCF3-216ENST00000485921 ADAM28Q9UKQ2 775 aa25.59■■□□□ 1.69
ABCF3-216ENST00000485921 IGFBP6P24592 240 aaPredicted RBP25.58■■□□□ 1.69
ABCF3-216ENST00000485921 PTPROQ16827 1216 aa25.58■■□□□ 1.69
ABCF3-216ENST00000485921 WDR49Q8IV35 697 aa25.58■■□□□ 1.69
ABCF3-216ENST00000485921 FAM84AQ96KN4 292 aa25.58■■□□□ 1.69
ABCF3-216ENST00000485921 POP1Q99575 1024 aaKnown RBP25.58■■□□□ 1.69
ABCF3-216ENST00000485921 CGRRF1Q99675 332 aa25.58■■□□□ 1.69
ABCF3-216ENST00000485921 VN1R3Q9BXE9 311 aa25.58■■□□□ 1.69
ABCF3-216ENST00000485921 INTS13Q9NVM9 706 aa25.58■■□□□ 1.69
ABCF3-216ENST00000485921 RWDD2AQ9UIY3 292 aa25.58■■□□□ 1.69
ABCF3-216ENST00000485921 TMEM189-UBE2V1I3L0A0 370 aa25.57■■□□□ 1.68
ABCF3-216ENST00000485921 CSPG5O95196 566 aa25.57■■□□□ 1.68
ABCF3-216ENST00000485921 TNNI1P19237 187 aa25.57■■□□□ 1.68
ABCF3-216ENST00000485921 IGFBP4P22692 258 aa25.57■■□□□ 1.68
ABCF3-216ENST00000485921 CAMK1Q14012 370 aa25.57■■□□□ 1.68
ABCF3-216ENST00000485921 C3orf58Q8NDZ4 430 aa25.57■■□□□ 1.68
ABCF3-216ENST00000485921 OR5B17Q8NGF7 314 aa25.57■■□□□ 1.68
ABCF3-216ENST00000485921 PLEKHO2Q8TD55 490 aa25.57■■□□□ 1.68
ABCF3-216ENST00000485921 PARD3BQ8TEW8 1205 aa25.57■■□□□ 1.68
ABCF3-216ENST00000485921 MRPL38Q96DV4 380 aaKnown RBP25.57■■□□□ 1.68
ABCF3-216ENST00000485921 ANKRD36BP1Q96IX9 119 aa25.57■■□□□ 1.68
ABCF3-216ENST00000485921 MKNK1Q9BUB5 465 aa25.57■■□□□ 1.68
ABCF3-216ENST00000485921 GZF1Q9H116 711 aaPredicted RBP25.57■■□□□ 1.68
ABCF3-216ENST00000485921 COL4A4P53420 1690 aaPredicted RBP25.57■■□□□ 1.68
ABCF3-216ENST00000485921 PLXNA4Q9HCM2 1894 aa25.57■■□□□ 1.68
ABCF3-216ENST00000485921 PTPRJQ12913 1337 aa25.57■■□□□ 1.68
ABCF3-216ENST00000485921 TMEM191BP0C7N4 346 aa25.56■■□□□ 1.68
ABCF3-216ENST00000485921 EPB41P11171 864 aaKnown RBP25.56■■□□□ 1.68
ABCF3-216ENST00000485921 DUOXA2Q1HG44 320 aa25.56■■□□□ 1.68
ABCF3-216ENST00000485921 C9orf57Q5W0N0 161 aa25.56■■□□□ 1.68
ABCF3-216ENST00000485921 FUT10Q6P4F1 479 aa25.56■■□□□ 1.68
ABCF3-216ENST00000485921 CD300LGQ6UXG3 332 aa25.56■■□□□ 1.68
ABCF3-216ENST00000485921 INTS8Q75QN2 995 aaKnown RBP25.56■■□□□ 1.68
ABCF3-216ENST00000485921 VPS52Q8N1B4 723 aa25.56■■□□□ 1.68
ABCF3-216ENST00000485921 CSGALNACT2Q8N6G5 542 aa25.56■■□□□ 1.68
ABCF3-216ENST00000485921 TMC2Q8TDI7 906 aa25.56■■□□□ 1.68
ABCF3-216ENST00000485921 CEP63Q96MT8 703 aa25.56■■□□□ 1.68
ABCF3-216ENST00000485921 GPR62Q9BZJ7 368 aa25.56■■□□□ 1.68
ABCF3-216ENST00000485921 MTMR12Q9C0I1 747 aa25.56■■□□□ 1.68
ABCF3-216ENST00000485921 TLR9Q9NR96 1032 aa25.56■■□□□ 1.68
ABCF3-216ENST00000485921 LMCD1Q9NZU5 365 aa25.56■■□□□ 1.68
ABCF3-216ENST00000485921 STK39Q9UEW8 545 aa25.56■■□□□ 1.68
ABCF3-216ENST00000485921 ANO9A1A5B4 782 aa25.55■■□□□ 1.68
ABCF3-216ENST00000485921 SLC16A3O15427 465 aaKnown RBP25.55■■□□□ 1.68
ABCF3-216ENST00000485921 EFEMP2O95967 443 aa25.55■■□□□ 1.68
ABCF3-216ENST00000485921 TNNC2P02585 160 aa25.55■■□□□ 1.68
ABCF3-216ENST00000485921 KRT13P13646 458 aa25.55■■□□□ 1.68
ABCF3-216ENST00000485921 POU3F3P20264 500 aaPredicted RBP25.55■■□□□ 1.68
ABCF3-216ENST00000485921 VAMP7P51809 220 aa25.55■■□□□ 1.68
ABCF3-216ENST00000485921 ERVFC1P60507 584 aa25.55■■□□□ 1.68
ABCF3-216ENST00000485921 MED15Q96RN5 788 aa25.55■■□□□ 1.68
ABCF3-216ENST00000485921 ANO10Q9NW15 660 aa25.55■■□□□ 1.68
ABCF3-216ENST00000485921 NUB1Q9Y5A7 615 aa25.55■■□□□ 1.68
ABCF3-216ENST00000485921 MTCH2Q9Y6C9 303 aa25.55■■□□□ 1.68
ABCF3-216ENST00000485921 SF3B1O75533 1304 aaKnown RBP eCLIP25.55■■□□□ 1.68
ABCF3-216ENST00000485921 LRRIQ3A6PVS8 624 aaPredicted RBP25.54■■□□□ 1.68
ABCF3-216ENST00000485921 PIRO00625 290 aa25.54■■□□□ 1.68
ABCF3-216ENST00000485921 PPEF2O14830 753 aa25.54■■□□□ 1.68
ABCF3-216ENST00000485921 SOD2P04179 222 aa25.54■■□□□ 1.68
ABCF3-216ENST00000485921 FOSL2P15408 326 aa25.54■■□□□ 1.68
ABCF3-216ENST00000485921 ERCC5P28715 1186 aaPredicted RBP25.54■■□□□ 1.68
ABCF3-216ENST00000485921 DLG4P78352 724 aa25.54■■□□□ 1.68
ABCF3-216ENST00000485921 CLDN10P78369 228 aa25.54■■□□□ 1.68
ABCF3-216ENST00000485921 STX1AQ16623 288 aa25.54■■□□□ 1.68
ABCF3-216ENST00000485921 CT47A1Q5JQC4 288 aaPredicted RBP25.54■■□□□ 1.68
ABCF3-216ENST00000485921 TAS1R1Q7RTX1 841 aa25.54■■□□□ 1.68
ABCF3-216ENST00000485921 TMC7Q7Z402 723 aa25.54■■□□□ 1.68
ABCF3-216ENST00000485921 FILIP1Q7Z7B0 1213 aa25.54■■□□□ 1.68
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms