RNA–Protein interactions for RNA: ENST00000485871.1

SND1-212, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 3

Gene SND1, Length 597 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-212ENST00000485871 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP12.23□□□□□ -0.45
SND1-212ENST00000485871 COL4A6Q14031 1691 aa12.22□□□□□ -0.45
SND1-212ENST00000485871 A0A1W2PQJ5 194 aa12.22□□□□□ -0.45
SND1-212ENST00000485871 INPPL1O15357 1258 aa12.22□□□□□ -0.45
SND1-212ENST00000485871 KCNE1P15382 129 aa12.22□□□□□ -0.45
SND1-212ENST00000485871 ZSCAN20P17040 1043 aaPredicted RBP12.22□□□□□ -0.45
SND1-212ENST00000485871 TNNI1P19237 187 aa12.22□□□□□ -0.45
SND1-212ENST00000485871 AKAP5P24588 427 aa12.22□□□□□ -0.45
SND1-212ENST00000485871 RAB27AP51159 221 aa12.22□□□□□ -0.45
SND1-212ENST00000485871 FAM189BP81408 668 aa12.22□□□□□ -0.45
SND1-212ENST00000485871 CCZ1BP86790 482 aa12.22□□□□□ -0.45
SND1-212ENST00000485871 CCZ1P86791 482 aaPredicted RBP12.22□□□□□ -0.45
SND1-212ENST00000485871 LRMPQ12912 555 aa12.22□□□□□ -0.45
SND1-212ENST00000485871 TRIM14Q14142 442 aa12.22□□□□□ -0.45
SND1-212ENST00000485871 KLHDC7AQ5VTJ3 777 aa12.22□□□□□ -0.45
SND1-212ENST00000485871 AGMOQ6ZNB7 445 aa12.22□□□□□ -0.45
SND1-212ENST00000485871 ECHDC2Q86YB7 292 aa12.22□□□□□ -0.45
SND1-212ENST00000485871 NT5DC4Q86YG4 428 aa12.22□□□□□ -0.45
SND1-212ENST00000485871 CRIPAKQ8N1N5 446 aa12.22□□□□□ -0.45
SND1-212ENST00000485871 TC2NQ8N9U0 490 aa12.22□□□□□ -0.45
SND1-212ENST00000485871 EHBP1Q8NDI1 1231 aa12.22□□□□□ -0.45
SND1-212ENST00000485871 BAP1Q92560 729 aa12.22□□□□□ -0.45
SND1-212ENST00000485871 NUP58Q9BVL2 599 aa12.22□□□□□ -0.45
SND1-212ENST00000485871 NAA15Q9BXJ9 866 aaKnown RBP12.22□□□□□ -0.45
SND1-212ENST00000485871 FTHL17Q9BXU8 183 aa12.22□□□□□ -0.45
SND1-212ENST00000485871 TRIM6Q9C030 488 aaPredicted RBP12.22□□□□□ -0.45
SND1-212ENST00000485871 MTMR12Q9C0I1 747 aa12.22□□□□□ -0.45
SND1-212ENST00000485871 INTS2Q9H0H0 1204 aaKnown RBP12.22□□□□□ -0.45
SND1-212ENST00000485871 RNF19AQ9NV58 838 aa12.22□□□□□ -0.45
SND1-212ENST00000485871 SIX4Q9UIU6 781 aa12.22□□□□□ -0.45
SND1-212ENST00000485871 FBXL5Q9UKA1 691 aa12.22□□□□□ -0.45
SND1-212ENST00000485871 CAPN11Q9UMQ6 739 aa12.22□□□□□ -0.45
SND1-212ENST00000485871 DERAQ9Y315 318 aa12.22□□□□□ -0.45
SND1-212ENST00000485871 UNC80Q8N2C7 3258 aa12.22□□□□□ -0.45
SND1-212ENST00000485871 PTGESO14684 152 aa12.21□□□□□ -0.45
SND1-212ENST00000485871 MFAP3LO75121 409 aa12.21□□□□□ -0.45
SND1-212ENST00000485871 TIMP1P01033 207 aa12.21□□□□□ -0.45
SND1-212ENST00000485871 CST3P01034 146 aaPredicted RBP12.21□□□□□ -0.45
SND1-212ENST00000485871 HLA-DRAP01903 254 aa12.21□□□□□ -0.45
SND1-212ENST00000485871 TPM1P09493 284 aa12.21□□□□□ -0.45
SND1-212ENST00000485871 FECHP22830 423 aa12.21□□□□□ -0.45
SND1-212ENST00000485871 GOLGA8FQ08AF8 430 aa12.21□□□□□ -0.45
SND1-212ENST00000485871 GOLGA8DPQ0D2H9 430 aa12.21□□□□□ -0.45
SND1-212ENST00000485871 DUOXA2Q1HG44 320 aa12.21□□□□□ -0.45
SND1-212ENST00000485871 PHLDB3Q6NSJ2 640 aa12.21□□□□□ -0.45
SND1-212ENST00000485871 TRAPPC11Q7Z392 1133 aa12.21□□□□□ -0.45
SND1-212ENST00000485871 C1orf127Q8N9H9 656 aa12.21□□□□□ -0.45
SND1-212ENST00000485871 FBXL13Q8NEE6 735 aa12.21□□□□□ -0.45
SND1-212ENST00000485871 SEPT8Q92599 483 aa12.21□□□□□ -0.45
SND1-212ENST00000485871 APBB2Q92870 758 aa12.21□□□□□ -0.45
SND1-212ENST00000485871 LPPQ93052 612 aa12.21□□□□□ -0.45
SND1-212ENST00000485871 IQCDQ96DY2 449 aa12.21□□□□□ -0.45
SND1-212ENST00000485871 FAM212AQ96EL1 285 aa12.21□□□□□ -0.45
SND1-212ENST00000485871 TSPAN18Q96SJ8 248 aa12.21□□□□□ -0.45
SND1-212ENST00000485871 APOL6Q9BWW8 343 aa12.21□□□□□ -0.45
SND1-212ENST00000485871 EDEM3Q9BZQ6 932 aa12.21□□□□□ -0.45
SND1-212ENST00000485871 C1orf112Q9NSG2 853 aa12.21□□□□□ -0.45
SND1-212ENST00000485871 FAM207AQ9NSI2 230 aaPredicted RBP12.21□□□□□ -0.45
SND1-212ENST00000485871 RAB20Q9NX57 234 aa12.21□□□□□ -0.45
SND1-212ENST00000485871 R3HCC1Q9Y3T6 440 aaKnown RBP12.21□□□□□ -0.45
SND1-212ENST00000485871 PAXBP1Q9Y5B6 917 aa12.21□□□□□ -0.45
SND1-212ENST00000485871 FHOD1Q9Y613 1164 aa12.21□□□□□ -0.45
SND1-212ENST00000485871 SMIM28A0A1B0GU29 152 aa12.2□□□□□ -0.46
SND1-212ENST00000485871 LOC101059915A0A1B0GWI6 518 aaPredicted RBP12.2□□□□□ -0.46
SND1-212ENST00000485871 GOLGA6L9A6NEM1 432 aa12.2□□□□□ -0.46
SND1-212ENST00000485871 ENPP3O14638 875 aa12.2□□□□□ -0.46
SND1-212ENST00000485871 ZC3H11AO75152 810 aaKnown RBP eCLIP12.2□□□□□ -0.462e-6■■■□□ 15
SND1-212ENST00000485871 SKIP12755 728 aa12.2□□□□□ -0.46
SND1-212ENST00000485871 ITGA4P13612 1032 aa12.2□□□□□ -0.46
SND1-212ENST00000485871 UCHL3P15374 230 aa12.2□□□□□ -0.46
SND1-212ENST00000485871 CASP14P31944 242 aa12.2□□□□□ -0.46
SND1-212ENST00000485871 RFC2P35250 354 aa12.2□□□□□ -0.46
SND1-212ENST00000485871 AFF1P51825 1210 aaKnown RBP12.2□□□□□ -0.46
SND1-212ENST00000485871 YARSP54577 528 aaKnown RBP12.2□□□□□ -0.46
SND1-212ENST00000485871 TFAMQ00059 246 aaKnown RBP12.2□□□□□ -0.46
SND1-212ENST00000485871 SOX4Q06945 474 aaPredicted RBP12.2□□□□□ -0.46
SND1-212ENST00000485871 TMEM132DQ14C87 1099 aa12.2□□□□□ -0.46
SND1-212ENST00000485871 NAB2Q15742 525 aa12.2□□□□□ -0.46
SND1-212ENST00000485871 E4F1Q66K89 784 aaPredicted RBP12.2□□□□□ -0.46
SND1-212ENST00000485871 IQCEQ6IPM2 695 aa12.2□□□□□ -0.46
SND1-212ENST00000485871 GJB7Q6PEY0 223 aa12.2□□□□□ -0.46
SND1-212ENST00000485871 SLC24A5Q71RS6 500 aa12.2□□□□□ -0.46
SND1-212ENST00000485871 ARHGEF19Q8IW93 802 aa12.2□□□□□ -0.46
SND1-212ENST00000485871 NEK11Q8NG66 645 aa12.2□□□□□ -0.46
SND1-212ENST00000485871 HELQQ8TDG4 1101 aa12.2□□□□□ -0.46
SND1-212ENST00000485871 KIF12Q96FN5 646 aa12.2□□□□□ -0.46
SND1-212ENST00000485871 ZFP42Q96MM3 310 aa12.2□□□□□ -0.46
SND1-212ENST00000485871 FAM161BQ96MY7 647 aa12.2□□□□□ -0.46
SND1-212ENST00000485871 PPP1R10Q96QC0 940 aaKnown RBP12.2□□□□□ -0.46
SND1-212ENST00000485871 GPR88Q9GZN0 384 aa12.2□□□□□ -0.46
SND1-212ENST00000485871 XYLT2Q9H1B5 865 aa12.2□□□□□ -0.46
SND1-212ENST00000485871 ELAC1Q9H777 363 aaKnown RBP12.2□□□□□ -0.46
SND1-212ENST00000485871 APOBEC3GQ9HC16 384 aaKnown RBP12.2□□□□□ -0.46
SND1-212ENST00000485871 MIOSQ9NXC5 875 aa12.2□□□□□ -0.46
SND1-212ENST00000485871 KLK14Q9P0G3 267 aa12.2□□□□□ -0.46
SND1-212ENST00000485871 CEP72Q9P209 647 aa12.2□□□□□ -0.46
SND1-212ENST00000485871 APEX2Q9UBZ4 518 aa12.2□□□□□ -0.46
SND1-212ENST00000485871 PARP2Q9UGN5 583 aa12.2□□□□□ -0.46
SND1-212ENST00000485871 PLAGL2Q9UPG8 496 aa12.2□□□□□ -0.46
SND1-212ENST00000485871 GIT1Q9Y2X7 761 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms