RNA–Protein interactions for RNA: ENST00000485870.1

COL1A1-206, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 3

Gene COL1A1, Length 403 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-206ENST00000485870 AMPD3Q01432 767 aa20.05■□□□□ 0.8
COL1A1-206ENST00000485870 SLFN12LQ6IEE8 588 aa20.05■□□□□ 0.8
COL1A1-206ENST00000485870 LNX1Q8TBB1 728 aaPredicted RBP20.05■□□□□ 0.8
COL1A1-206ENST00000485870 LEO1Q8WVC0 666 aaPredicted RBP20.05■□□□□ 0.8
COL1A1-206ENST00000485870 SPATA32Q96LK8 384 aa20.05■□□□□ 0.8
COL1A1-206ENST00000485870 RIPOR3Q96MK2 946 aa20.05■□□□□ 0.8
COL1A1-206ENST00000485870 TRIM9Q9C026 710 aa20.05■□□□□ 0.8
COL1A1-206ENST00000485870 POMKQ9H5K3 350 aa20.05■□□□□ 0.8
COL1A1-206ENST00000485870 EXOC7Q9UPT5 735 aa20.05■□□□□ 0.8
COL1A1-206ENST00000485870 PCDHB13Q9Y5F0 798 aa20.05■□□□□ 0.8
COL1A1-206ENST00000485870 TCHHQ07283 1943 aa20.04■□□□□ 0.8
COL1A1-206ENST00000485870 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP20.04■□□□□ 0.8
COL1A1-206ENST00000485870 LOC730098B7Z3J9 87 aa20.04■□□□□ 0.8
COL1A1-206ENST00000485870 TGM5O43548 720 aa20.04■□□□□ 0.8
COL1A1-206ENST00000485870 TRAPPC3O43617 180 aa20.04■□□□□ 0.8
COL1A1-206ENST00000485870 FGFR3P22607 806 aa20.04■□□□□ 0.8
COL1A1-206ENST00000485870 TKTP29401 623 aaKnown RBP20.04■□□□□ 0.8
COL1A1-206ENST00000485870 RPL9P32969 192 aaKnown RBP20.04■□□□□ 0.8
COL1A1-206ENST00000485870 MTHFRP42898 656 aa20.04■□□□□ 0.8
COL1A1-206ENST00000485870 ACOT2P49753 483 aa20.04■□□□□ 0.8
COL1A1-206ENST00000485870 POMGNT1Q8WZA1 660 aa20.04■□□□□ 0.8
COL1A1-206ENST00000485870 HPS3Q969F9 1004 aa20.04■□□□□ 0.8
COL1A1-206ENST00000485870 NECTIN4Q96NY8 510 aa20.04■□□□□ 0.8
COL1A1-206ENST00000485870 TSHZ2Q9NRE2 1034 aa20.04■□□□□ 0.8
COL1A1-206ENST00000485870 CPSF3Q9UKF6 684 aaKnown RBP20.04■□□□□ 0.8
COL1A1-206ENST00000485870 AGO2Q9UKV8 859 aaKnown RBP20.04■□□□□ 0.8
COL1A1-206ENST00000485870 NUB1Q9Y5A7 615 aa20.04■□□□□ 0.8
COL1A1-206ENST00000485870 STYXL1Q9Y6J8 313 aa20.04■□□□□ 0.8
COL1A1-206ENST00000485870 ALCAMQ13740 583 aa20.03■□□□□ 0.8
COL1A1-206ENST00000485870 ATAT1Q5SQI0 421 aa20.03■□□□□ 0.8
COL1A1-206ENST00000485870 PDXDC1Q6P996 788 aa20.03■□□□□ 0.8
COL1A1-206ENST00000485870 ELMSAN1Q6PJG2 1045 aa20.03■□□□□ 0.8
COL1A1-206ENST00000485870 SYCP3Q8IZU3 236 aa20.03■□□□□ 0.8
COL1A1-206ENST00000485870 CLSTN3Q9BQT9 956 aa20.03■□□□□ 0.8
COL1A1-206ENST00000485870 MAGEF1Q9HAY2 307 aa20.03■□□□□ 0.8
COL1A1-206ENST00000485870 KCNH3Q9ULD8 1083 aa20.03■□□□□ 0.8
COL1A1-206ENST00000485870 UBQLN1Q9UMX0 589 aaKnown RBP20.03■□□□□ 0.8
COL1A1-206ENST00000485870 ATP6V1DQ9Y5K8 247 aa20.03■□□□□ 0.8
COL1A1-206ENST00000485870 MTCL1Q9Y4B5 1905 aaKnown RBP20.02■□□□□ 0.8
COL1A1-206ENST00000485870 ADAM12O43184 909 aa20.02■□□□□ 0.8
COL1A1-206ENST00000485870 PRPF6O94906 941 aaKnown RBP20.02■□□□□ 0.8
COL1A1-206ENST00000485870 CASP1P29466 404 aa20.02■□□□□ 0.8
COL1A1-206ENST00000485870 ADSSP30520 456 aa20.02■□□□□ 0.8
COL1A1-206ENST00000485870 MCM4P33991 863 aa20.02■□□□□ 0.8
COL1A1-206ENST00000485870 GUCY2FP51841 1108 aa20.02■□□□□ 0.8
COL1A1-206ENST00000485870 POSTNQ15063 836 aa20.02■□□□□ 0.8
COL1A1-206ENST00000485870 JADE1Q6IE81 842 aa20.02■□□□□ 0.8
COL1A1-206ENST00000485870 RNF135Q8IUD6 432 aa20.02■□□□□ 0.8
COL1A1-206ENST00000485870 GLIS3Q8NEA6 775 aa20.02■□□□□ 0.8
COL1A1-206ENST00000485870 C7orf25Q9BPX7 421 aa20.02■□□□□ 0.8
COL1A1-206ENST00000485870 BLZF1Q9H2G9 400 aa20.02■□□□□ 0.8
COL1A1-206ENST00000485870 DPP7Q9UHL4 492 aa20.02■□□□□ 0.8
COL1A1-206ENST00000485870 C2orf16Q68DN1 1984 aa20.02■□□□□ 0.8
COL1A1-206ENST00000485870 A0A1B0GVL5 298 aa20.01■□□□□ 0.79
COL1A1-206ENST00000485870 PI4K2BG5E9Z4 385 aa20.01■□□□□ 0.79
COL1A1-206ENST00000485870 XPOTO43592 962 aaKnown RBP20.01■□□□□ 0.79
COL1A1-206ENST00000485870 RFPL2O75678 378 aa20.01■□□□□ 0.79
COL1A1-206ENST00000485870 ADRB2P07550 413 aa20.01■□□□□ 0.79
COL1A1-206ENST00000485870 PFKFB1P16118 471 aa20.01■□□□□ 0.79
COL1A1-206ENST00000485870 AFMP43652 599 aa20.01■□□□□ 0.79
COL1A1-206ENST00000485870 ZBTB6Q15916 424 aa20.01■□□□□ 0.79
COL1A1-206ENST00000485870 CNNM4Q6P4Q7 775 aa20.01■□□□□ 0.79
COL1A1-206ENST00000485870 LILRA6Q6PI73 481 aa20.01■□□□□ 0.79
COL1A1-206ENST00000485870 GPR149Q86SP6 731 aa20.01■□□□□ 0.79
COL1A1-206ENST00000485870 CD302Q8IX05 232 aa20.01■□□□□ 0.79
COL1A1-206ENST00000485870 GRAMD1CQ8IYS0 662 aa20.01■□□□□ 0.79
COL1A1-206ENST00000485870 CEP57L1Q8IYX8 460 aa20.01■□□□□ 0.79
COL1A1-206ENST00000485870 KREMEN2Q8NCW0 462 aa20.01■□□□□ 0.79
COL1A1-206ENST00000485870 PYM1Q9BRP8 204 aaKnown RBP20.01■□□□□ 0.79
COL1A1-206ENST00000485870 PLEKHA4Q9H4M7 779 aa20.01■□□□□ 0.79
COL1A1-206ENST00000485870 MTRRQ9UBK8 725 aa20.01■□□□□ 0.79
COL1A1-206ENST00000485870 SERTAD1Q9UHV2 236 aa20.01■□□□□ 0.79
COL1A1-206ENST00000485870 MUTYHQ9UIF7 546 aa20.01■□□□□ 0.79
COL1A1-206ENST00000485870 ANK1P16157 1881 aa20.01■□□□□ 0.79
COL1A1-206ENST00000485870 CCDC195A0A1B0GUA6 201 aa20■□□□□ 0.79
COL1A1-206ENST00000485870 TULP1O00294 542 aaPredicted RBP20■□□□□ 0.79
COL1A1-206ENST00000485870 DCXO43602 365 aa20■□□□□ 0.79
COL1A1-206ENST00000485870 NFICP08651 508 aa20■□□□□ 0.79
COL1A1-206ENST00000485870 CYP3A5P20815 502 aa20■□□□□ 0.79
COL1A1-206ENST00000485870 LRPAP1P30533 357 aa20■□□□□ 0.79
COL1A1-206ENST00000485870 OR1D2P34982 312 aa20■□□□□ 0.79
COL1A1-206ENST00000485870 TMEM132DQ14C87 1099 aa20■□□□□ 0.79
COL1A1-206ENST00000485870 ANKS3Q6ZW76 656 aa20■□□□□ 0.79
COL1A1-206ENST00000485870 STXBP4Q6ZWJ1 553 aa20■□□□□ 0.79
COL1A1-206ENST00000485870 CMASQ8NFW8 434 aaPredicted RBP20■□□□□ 0.79
COL1A1-206ENST00000485870 SAAL1Q96ER3 474 aa20■□□□□ 0.79
COL1A1-206ENST00000485870 FAM213AQ9BRX8 229 aa20■□□□□ 0.79
COL1A1-206ENST00000485870 TMEM206Q9H813 350 aa20■□□□□ 0.79
COL1A1-206ENST00000485870 CDY1Q9Y6F8 540 aa20■□□□□ 0.79
COL1A1-206ENST00000485870 C1RP00736 705 aa19.99■□□□□ 0.79
COL1A1-206ENST00000485870 ALADP13716 330 aa19.99■□□□□ 0.79
COL1A1-206ENST00000485870 CMA1P23946 247 aa19.99■□□□□ 0.79
COL1A1-206ENST00000485870 CUL4BQ13620 913 aa19.99■□□□□ 0.79
COL1A1-206ENST00000485870 FAM26FQ5R3K3 315 aa19.99■□□□□ 0.79
COL1A1-206ENST00000485870 VARS2Q5ST30 1063 aaKnown RBP19.99■□□□□ 0.79
COL1A1-206ENST00000485870 CRELD2Q6UXH1 353 aaPredicted RBP19.99■□□□□ 0.79
COL1A1-206ENST00000485870 RSPO2Q6UXX9 243 aaPredicted RBP19.99■□□□□ 0.79
COL1A1-206ENST00000485870 C15orf39Q6ZRI6 1047 aa19.99■□□□□ 0.79
COL1A1-206ENST00000485870 UNC13DQ70J99 1090 aa19.99■□□□□ 0.79
COL1A1-206ENST00000485870 ZSWIM2Q8NEG5 633 aa19.99■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms