RNA–Protein interactions for RNA: ENST00000485792.1

CUX1-208, Transcript of cut like homeobox 1, humanhuman

TSL 5

Gene CUX1, Length 564 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-208ENST00000485792 IGSF21Q96ID5 467 aa6.28□□□□□ -1.4
CUX1-208ENST00000485792 MSLNLQ96KJ4 702 aa6.28□□□□□ -1.4
CUX1-208ENST00000485792 MRGPRX2Q96LB1 330 aa6.28□□□□□ -1.4
CUX1-208ENST00000485792 IFT74Q96LB3 600 aa6.28□□□□□ -1.4
CUX1-208ENST00000485792 ZNF396Q96N95 335 aaPredicted RBP6.28□□□□□ -1.4
CUX1-208ENST00000485792 PPP1R10Q96QC0 940 aaKnown RBP6.28□□□□□ -1.4
CUX1-208ENST00000485792 TMEM175Q9BSA9 504 aa6.28□□□□□ -1.4
CUX1-208ENST00000485792 TARS2Q9BW92 718 aaKnown RBP6.28□□□□□ -1.4
CUX1-208ENST00000485792 COL25A1Q9BXS0 654 aaPredicted RBP6.28□□□□□ -1.4
CUX1-208ENST00000485792 RSAD1Q9HA92 442 aa6.28□□□□□ -1.4
CUX1-208ENST00000485792 OLFML3Q9NRN5 406 aa6.28□□□□□ -1.4
CUX1-208ENST00000485792 KLK14Q9P0G3 267 aa6.28□□□□□ -1.4
CUX1-208ENST00000485792 CLEC1BQ9P126 229 aa6.28□□□□□ -1.4
CUX1-208ENST00000485792 LARSQ9P2J5 1176 aaKnown RBP6.28□□□□□ -1.4
CUX1-208ENST00000485792 PCDHB12Q9Y5F1 795 aa6.28□□□□□ -1.4
CUX1-208ENST00000485792 DMDP11532 3685 aa6.28□□□□□ -1.4
CUX1-208ENST00000485792 HELZP42694 1942 aaKnown RBP6.27□□□□□ -1.41
CUX1-208ENST00000485792 FANCMQ8IYD8 2048 aa6.27□□□□□ -1.41
CUX1-208ENST00000485792 TMEM189-UBE2V1I3L0A0 370 aa6.27□□□□□ -1.41
CUX1-208ENST00000485792 N4BP3O15049 544 aa6.27□□□□□ -1.41
CUX1-208ENST00000485792 NCK2O43639 380 aa6.27□□□□□ -1.41
CUX1-208ENST00000485792 TOM1L1O75674 476 aa6.27□□□□□ -1.41
CUX1-208ENST00000485792 RECQL4O94761 1208 aa6.27□□□□□ -1.41
CUX1-208ENST00000485792 VNN2O95498 520 aa6.27□□□□□ -1.41
CUX1-208ENST00000485792 MYBP10242 640 aa6.27□□□□□ -1.41
CUX1-208ENST00000485792 KCNE1P15382 129 aa6.27□□□□□ -1.41
CUX1-208ENST00000485792 ADSSP30520 456 aa6.27□□□□□ -1.41
CUX1-208ENST00000485792 ABCD1P33897 745 aa6.27□□□□□ -1.41
CUX1-208ENST00000485792 SOX11P35716 441 aa6.27□□□□□ -1.41
CUX1-208ENST00000485792 PPM1AP35813 382 aa6.27□□□□□ -1.41
CUX1-208ENST00000485792 GRM5P41594 1212 aa6.27□□□□□ -1.41
CUX1-208ENST00000485792 GUCY2FP51841 1108 aa6.27□□□□□ -1.41
CUX1-208ENST00000485792 DPYDQ12882 1025 aa6.27□□□□□ -1.41
CUX1-208ENST00000485792 DMP1Q13316 513 aaPredicted RBP6.27□□□□□ -1.41
CUX1-208ENST00000485792 PRPF4BQ13523 1007 aaKnown RBP6.27□□□□□ -1.41
CUX1-208ENST00000485792 PTPROQ16827 1216 aa6.27□□□□□ -1.41
CUX1-208ENST00000485792 DCAF4L1Q3SXM0 396 aa6.27□□□□□ -1.41
CUX1-208ENST00000485792 TIGD5Q53EQ6 642 aa6.27□□□□□ -1.41
CUX1-208ENST00000485792 GLRA4Q5JXX5 417 aa6.27□□□□□ -1.41
CUX1-208ENST00000485792 ATF7IP2Q5U623 682 aa6.27□□□□□ -1.41
CUX1-208ENST00000485792 ADALQ6DHV7 355 aa6.27□□□□□ -1.41
CUX1-208ENST00000485792 CRELD2Q6UXH1 353 aaPredicted RBP6.27□□□□□ -1.41
CUX1-208ENST00000485792 RSPO2Q6UXX9 243 aaPredicted RBP6.27□□□□□ -1.41
CUX1-208ENST00000485792 CCDC73Q6ZRK6 1079 aa6.27□□□□□ -1.41
CUX1-208ENST00000485792 EPM2AIP1Q7L775 607 aaPredicted RBP6.27□□□□□ -1.41
CUX1-208ENST00000485792 HAUS6Q7Z4H7 955 aa6.27□□□□□ -1.41
CUX1-208ENST00000485792 GPBP1Q86WP2 473 aa6.27□□□□□ -1.41
CUX1-208ENST00000485792 SFR1Q86XK3 245 aa6.27□□□□□ -1.41
CUX1-208ENST00000485792 MAP4K3Q8IVH8 894 aa6.27□□□□□ -1.41
CUX1-208ENST00000485792 MICALL1Q8N3F8 863 aa6.27□□□□□ -1.41
CUX1-208ENST00000485792 EFHBQ8N7U6 833 aa6.27□□□□□ -1.41
CUX1-208ENST00000485792 MRPL43Q8N983 215 aaKnown RBP6.27□□□□□ -1.41
CUX1-208ENST00000485792 RNF169Q8NCN4 708 aa6.27□□□□□ -1.41
CUX1-208ENST00000485792 SLC17A8Q8NDX2 589 aa6.27□□□□□ -1.41
CUX1-208ENST00000485792 GADD45GIP1Q8TAE8 222 aaPredicted RBP6.27□□□□□ -1.41
CUX1-208ENST00000485792 PLEKHO2Q8TD55 490 aa6.27□□□□□ -1.41
CUX1-208ENST00000485792 LEO1Q8WVC0 666 aaPredicted RBP6.27□□□□□ -1.41
CUX1-208ENST00000485792 PPM1EQ8WY54 764 aa6.27□□□□□ -1.41
CUX1-208ENST00000485792 ZNF592Q92610 1267 aa6.27□□□□□ -1.41
CUX1-208ENST00000485792 SCLT1Q96NL6 688 aa6.27□□□□□ -1.41
CUX1-208ENST00000485792 ASB2Q96Q27 587 aa6.27□□□□□ -1.41
CUX1-208ENST00000485792 GAD1Q99259 594 aa6.27□□□□□ -1.41
CUX1-208ENST00000485792 C7orf25Q9BPX7 421 aa6.27□□□□□ -1.41
CUX1-208ENST00000485792 ZBP1Q9H171 429 aa6.27□□□□□ -1.41
CUX1-208ENST00000485792 TNMDQ9H2S6 317 aa6.27□□□□□ -1.41
CUX1-208ENST00000485792 CUEDC2Q9H467 287 aa6.27□□□□□ -1.41
CUX1-208ENST00000485792 NSUN3Q9H649 340 aaKnown RBP6.27□□□□□ -1.41
CUX1-208ENST00000485792 PARVGQ9HBI0 331 aa6.27□□□□□ -1.41
CUX1-208ENST00000485792 KMT5AQ9NQR1 393 aa6.27□□□□□ -1.41
CUX1-208ENST00000485792 AAASQ9NRG9 546 aa6.27□□□□□ -1.41
CUX1-208ENST00000485792 CHST7Q9NS84 486 aa6.27□□□□□ -1.41
CUX1-208ENST00000485792 TOR4AQ9NXH8 423 aa6.27□□□□□ -1.41
CUX1-208ENST00000485792 SPG21Q9NZD8 308 aa6.27□□□□□ -1.41
CUX1-208ENST00000485792 SEL1LQ9UBV2 794 aa6.27□□□□□ -1.41
CUX1-208ENST00000485792 STK39Q9UEW8 545 aa6.27□□□□□ -1.41
CUX1-208ENST00000485792 CFAP45Q9UL16 551 aa6.27□□□□□ -1.41
CUX1-208ENST00000485792 TBX20Q9UMR3 447 aa6.27□□□□□ -1.41
CUX1-208ENST00000485792 PCDHB9Q9Y5E1 797 aa6.27□□□□□ -1.41
CUX1-208ENST00000485792 MYO15AQ9UKN7 3530 aa6.27□□□□□ -1.41
CUX1-208ENST00000485792 A0A0B4J269 797 aa6.26□□□□□ -1.41
CUX1-208ENST00000485792 A0A1W2PQ27 194 aa6.26□□□□□ -1.41
CUX1-208ENST00000485792 A0A1W2PQ64 194 aa6.26□□□□□ -1.41
CUX1-208ENST00000485792 A0A1W2PQD8 194 aa6.26□□□□□ -1.41
CUX1-208ENST00000485792 TTC26A0AVF1 554 aa6.26□□□□□ -1.41
CUX1-208ENST00000485792 C2orf71A6NGG8 1288 aa6.26□□□□□ -1.41
CUX1-208ENST00000485792 H0YCG3 227 aa6.26□□□□□ -1.41
CUX1-208ENST00000485792 NRP1O14786 923 aa6.26□□□□□ -1.41
CUX1-208ENST00000485792 ADAM12O43184 909 aa6.26□□□□□ -1.41
CUX1-208ENST00000485792 SIAH2O43255 324 aa6.26□□□□□ -1.41
CUX1-208ENST00000485792 KIF4AO95239 1232 aa6.26□□□□□ -1.41
CUX1-208ENST00000485792 POMCP01189 267 aa6.26□□□□□ -1.41
CUX1-208ENST00000485792 ALDH2P05091 517 aa6.26□□□□□ -1.41
CUX1-208ENST00000485792 CTSAP10619 480 aa6.26□□□□□ -1.41
CUX1-208ENST00000485792 MCF2P10911 925 aa6.26□□□□□ -1.41
CUX1-208ENST00000485792 ITGA4P13612 1032 aa6.26□□□□□ -1.41
CUX1-208ENST00000485792 IL9P15248 144 aa6.26□□□□□ -1.41
CUX1-208ENST00000485792 IGFBP4P22692 258 aa6.26□□□□□ -1.41
CUX1-208ENST00000485792 CMA1P23946 247 aa6.26□□□□□ -1.41
CUX1-208ENST00000485792 ALDH7A1P49419 539 aaKnown RBP6.26□□□□□ -1.41
CUX1-208ENST00000485792 SMTNP53814 917 aa6.26□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms