RNA–Protein interactions for RNA: ENST00000485465.1

CHMP3-207, Transcript of charged multivesicular body protein 3, humanhuman

TSL 3

Gene CHMP3, Length 920 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-207ENST00000485465 RC3H2Q9HBD1 1191 aaKnown RBP18.99■□□□□ 0.63
CHMP3-207ENST00000485465 DPP3Q9NY33 737 aa18.99■□□□□ 0.63
CHMP3-207ENST00000485465 GTF3C5Q9Y5Q8 519 aaPredicted RBP18.99■□□□□ 0.63
CHMP3-207ENST00000485465 CITO14578 2027 aa18.99■□□□□ 0.63
CHMP3-207ENST00000485465 A0A1B0GTH6 734 aa18.98■□□□□ 0.63
CHMP3-207ENST00000485465 LGALS16A8MUM7 142 aa18.98■□□□□ 0.63
CHMP3-207ENST00000485465 P4HA2O15460 535 aa18.98■□□□□ 0.63
CHMP3-207ENST00000485465 BMP8BP34820 402 aa18.98■□□□□ 0.63
CHMP3-207ENST00000485465 UBASH3AP57075 661 aa18.98■□□□□ 0.63
CHMP3-207ENST00000485465 MYL7Q01449 175 aa18.98■□□□□ 0.63
CHMP3-207ENST00000485465 RNASELQ05823 741 aaKnown RBP18.98■□□□□ 0.63
CHMP3-207ENST00000485465 SOX4Q06945 474 aaPredicted RBP18.98■□□□□ 0.63
CHMP3-207ENST00000485465 BIRC3Q13489 604 aa18.98■□□□□ 0.63
CHMP3-207ENST00000485465 PAN2Q504Q3 1202 aaKnown RBP18.98■□□□□ 0.63
CHMP3-207ENST00000485465 SARM1Q6SZW1 724 aa18.98■□□□□ 0.63
CHMP3-207ENST00000485465 TMEM130Q8N3G9 435 aa18.98■□□□□ 0.63
CHMP3-207ENST00000485465 C1orf127Q8N9H9 656 aa18.98■□□□□ 0.63
CHMP3-207ENST00000485465 RTN4Q9NQC3 1192 aaKnown RBP18.98■□□□□ 0.63
CHMP3-207ENST00000485465 IFNKQ9P0W0 207 aa18.98■□□□□ 0.63
CHMP3-207ENST00000485465 ITGA11Q9UKX5 1188 aa18.98■□□□□ 0.63
CHMP3-207ENST00000485465 AP5Z1O43299 807 aa18.97■□□□□ 0.63
CHMP3-207ENST00000485465 PHACTR2O75167 634 aa18.97■□□□□ 0.63
CHMP3-207ENST00000485465 DDHD2O94830 711 aa18.97■□□□□ 0.63
CHMP3-207ENST00000485465 HTRA4P83105 476 aaPredicted RBP18.97■□□□□ 0.63
CHMP3-207ENST00000485465 PLCB2Q00722 1185 aa18.97■□□□□ 0.63
CHMP3-207ENST00000485465 DSC1Q08554 894 aa18.97■□□□□ 0.63
CHMP3-207ENST00000485465 TUSC3Q13454 348 aa18.97■□□□□ 0.63
CHMP3-207ENST00000485465 GSE1Q14687 1217 aa18.97■□□□□ 0.63
CHMP3-207ENST00000485465 NR1I3Q14994 352 aa18.97■□□□□ 0.63
CHMP3-207ENST00000485465 ZNF280BQ86YH2 543 aa18.97■□□□□ 0.63
CHMP3-207ENST00000485465 CMTR2Q8IYT2 770 aaKnown RBP18.97■□□□□ 0.63
CHMP3-207ENST00000485465 LRRC43Q8N309 656 aa18.97■□□□□ 0.63
CHMP3-207ENST00000485465 CXorf38Q8TB03 319 aa18.97■□□□□ 0.63
CHMP3-207ENST00000485465 FAM193BQ96PV7 902 aaPredicted RBP18.97■□□□□ 0.63
CHMP3-207ENST00000485465 YME1L1Q96TA2 773 aa18.97■□□□□ 0.63
CHMP3-207ENST00000485465 ZBED2Q9BTP6 218 aa18.97■□□□□ 0.63
CHMP3-207ENST00000485465 GOLGA2P5Q9HBQ8 144 aa18.97■□□□□ 0.63
CHMP3-207ENST00000485465 SIX4Q9UIU6 781 aa18.97■□□□□ 0.63
CHMP3-207ENST00000485465 COL4A6Q14031 1691 aa18.96■□□□□ 0.63
CHMP3-207ENST00000485465 VNN1O95497 513 aa18.96■□□□□ 0.63
CHMP3-207ENST00000485465 ITGB3P05106 788 aa18.96■□□□□ 0.63
CHMP3-207ENST00000485465 LRPAP1P30533 357 aa18.96■□□□□ 0.63
CHMP3-207ENST00000485465 RBP5P82980 135 aa18.96■□□□□ 0.63
CHMP3-207ENST00000485465 UBXN1Q04323 297 aa18.96■□□□□ 0.63
CHMP3-207ENST00000485465 CETN1Q12798 172 aa18.96■□□□□ 0.63
CHMP3-207ENST00000485465 FKBP15Q5T1M5 1219 aa18.96■□□□□ 0.63
CHMP3-207ENST00000485465 SCARA3Q6AZY7 606 aa18.96■□□□□ 0.63
CHMP3-207ENST00000485465 TAS1R2Q8TE23 839 aa18.96■□□□□ 0.63
CHMP3-207ENST00000485465 RAD9AQ99638 391 aa18.96■□□□□ 0.63
CHMP3-207ENST00000485465 NRDE2Q9H7Z3 1164 aa18.96■□□□□ 0.63
CHMP3-207ENST00000485465 GRPEL1Q9HAV7 217 aa18.96■□□□□ 0.63
CHMP3-207ENST00000485465 COQ4Q9Y3A0 265 aa18.96■□□□□ 0.63
CHMP3-207ENST00000485465 INSL6Q9Y581 213 aa18.96■□□□□ 0.63
CHMP3-207ENST00000485465 PTPRSQ13332 1948 aa18.96■□□□□ 0.63
CHMP3-207ENST00000485465 PDCD11Q14690 1871 aaKnown RBP18.95■□□□□ 0.62
CHMP3-207ENST00000485465 ANO9A1A5B4 782 aa18.95■□□□□ 0.62
CHMP3-207ENST00000485465 GTPBP10A4D1E9 387 aaKnown RBP18.95■□□□□ 0.62
CHMP3-207ENST00000485465 TEX33O43247 280 aa18.95■□□□□ 0.62
CHMP3-207ENST00000485465 CBFA2T2O43439 604 aa18.95■□□□□ 0.62
CHMP3-207ENST00000485465 B4GALT3O60512 393 aa18.95■□□□□ 0.62
CHMP3-207ENST00000485465 CST3P01034 146 aaPredicted RBP18.95■□□□□ 0.62
CHMP3-207ENST00000485465 HLA-DRAP01903 254 aa18.95■□□□□ 0.62
CHMP3-207ENST00000485465 KRT19P08727 400 aa18.95■□□□□ 0.62
CHMP3-207ENST00000485465 POLR2BP30876 1174 aaKnown RBP18.95■□□□□ 0.62
CHMP3-207ENST00000485465 RPL9P32969 192 aaKnown RBP18.95■□□□□ 0.62
CHMP3-207ENST00000485465 PIK3CAP42336 1068 aa18.95■□□□□ 0.62
CHMP3-207ENST00000485465 TRPC3Q13507 836 aa18.95■□□□□ 0.62
CHMP3-207ENST00000485465 NCOA4Q13772 614 aa18.95■□□□□ 0.62
CHMP3-207ENST00000485465 BTG3Q14201 252 aaPredicted RBP18.95■□□□□ 0.62
CHMP3-207ENST00000485465 EPC2Q52LR7 807 aa18.95■□□□□ 0.62
CHMP3-207ENST00000485465 C9orf57Q5W0N0 161 aa18.95■□□□□ 0.62
CHMP3-207ENST00000485465 GBP6Q6ZN66 633 aa18.95■□□□□ 0.62
CHMP3-207ENST00000485465 COLGALT2Q8IYK4 626 aa18.95■□□□□ 0.62
CHMP3-207ENST00000485465 FBXL13Q8NEE6 735 aa18.95■□□□□ 0.62
CHMP3-207ENST00000485465 SEMA4DQ92854 862 aa18.95■□□□□ 0.62
CHMP3-207ENST00000485465 DDX27Q96GQ7 796 aaKnown RBP18.95■□□□□ 0.62
CHMP3-207ENST00000485465 UROC1Q96N76 676 aa18.95■□□□□ 0.62
CHMP3-207ENST00000485465 XPO4Q9C0E2 1151 aaKnown RBP18.95■□□□□ 0.62
CHMP3-207ENST00000485465 RAB20Q9NX57 234 aa18.95■□□□□ 0.62
CHMP3-207ENST00000485465 AGAP1Q9UPQ3 857 aa18.95■□□□□ 0.62
CHMP3-207ENST00000485465 TRIP11Q15643 1979 aa18.95■□□□□ 0.62
CHMP3-207ENST00000485465 TNRC18O15417 2968 aaPredicted RBP18.94■□□□□ 0.62
CHMP3-207ENST00000485465 CASTOR2A6NHX0 329 aa18.94■□□□□ 0.62
CHMP3-207ENST00000485465 PIRO00625 290 aa18.94■□□□□ 0.62
CHMP3-207ENST00000485465 TLL1O43897 1013 aa18.94■□□□□ 0.62
CHMP3-207ENST00000485465 CLCNKBP51801 687 aa18.94■□□□□ 0.62
CHMP3-207ENST00000485465 EHBP1Q8NDI1 1231 aa18.94■□□□□ 0.62
CHMP3-207ENST00000485465 CRACR2AQ9BSW2 395 aa18.94■□□□□ 0.62
CHMP3-207ENST00000485465 TRIM5Q9C035 493 aa18.94■□□□□ 0.62
CHMP3-207ENST00000485465 CWH43Q9H720 699 aa18.94■□□□□ 0.62
CHMP3-207ENST00000485465 HCSTQ9UBK5 93 aa18.94■□□□□ 0.62
CHMP3-207ENST00000485465 CACNG4Q9UBN1 327 aa18.94■□□□□ 0.62
CHMP3-207ENST00000485465 DNAJB4Q9UDY4 337 aa18.94■□□□□ 0.62
CHMP3-207ENST00000485465 R3HCC1Q9Y3T6 440 aaKnown RBP18.94■□□□□ 0.62
CHMP3-207ENST00000485465 FNDC1Q4ZHG4 1894 aaPredicted RBP18.94■□□□□ 0.62
CHMP3-207ENST00000485465 PODXLO00592 558 aa18.93■□□□□ 0.62
CHMP3-207ENST00000485465 PPEF2O14830 753 aa18.93■□□□□ 0.62
CHMP3-207ENST00000485465 TPM3P06753 285 aa18.93■□□□□ 0.62
CHMP3-207ENST00000485465 MYL6P60660 151 aa18.93■□□□□ 0.62
CHMP3-207ENST00000485465 KCNMA1Q12791 1236 aa18.93■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms