RNA–Protein interactions for RNA: ENST00000485407.1

NHLRC3-205, Transcript of NHL repeat containing 3, humanhuman

TSL 3

Gene NHLRC3, Length 623 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC3-205ENST00000485407 SMG8Q8ND04 991 aaKnown RBP6.37□□□□□ -1.39
NHLRC3-205ENST00000485407 LMBR1Q8WVP7 490 aa6.37□□□□□ -1.39
NHLRC3-205ENST00000485407 FAM227BQ96M60 508 aa6.37□□□□□ -1.39
NHLRC3-205ENST00000485407 GUCD1Q96NT3 240 aa6.37□□□□□ -1.39
NHLRC3-205ENST00000485407 FAM193BQ96PV7 902 aaPredicted RBP6.37□□□□□ -1.39
NHLRC3-205ENST00000485407 ACO2Q99798 780 aaKnown RBP6.37□□□□□ -1.39
NHLRC3-205ENST00000485407 PAGR1Q9BTK6 254 aa6.37□□□□□ -1.39
NHLRC3-205ENST00000485407 RNF208Q9H0X6 261 aa6.37□□□□□ -1.39
NHLRC3-205ENST00000485407 DNAJC18Q9H819 358 aa6.37□□□□□ -1.39
NHLRC3-205ENST00000485407 TOMM22Q9NS69 142 aa6.37□□□□□ -1.39
NHLRC3-205ENST00000485407 FAM105AQ9NUU6 356 aa6.37□□□□□ -1.39
NHLRC3-205ENST00000485407 CTNNA3Q9UI47 895 aa6.37□□□□□ -1.39
NHLRC3-205ENST00000485407 SLC45A1Q9Y2W3 748 aa6.37□□□□□ -1.39
NHLRC3-205ENST00000485407 AFG3L2Q9Y4W6 797 aa6.37□□□□□ -1.39
NHLRC3-205ENST00000485407 PCDHA2Q9Y5H9 948 aa6.37□□□□□ -1.39
NHLRC3-205ENST00000485407 ACTL7BQ9Y614 415 aa6.37□□□□□ -1.39
NHLRC3-205ENST00000485407 ZHX2Q9Y6X8 837 aa6.37□□□□□ -1.39
NHLRC3-205ENST00000485407 MUC6Q6W4X9 2439 aa6.37□□□□□ -1.39
NHLRC3-205ENST00000485407 CDH23Q9H251 3354 aa6.37□□□□□ -1.39
NHLRC3-205ENST00000485407 PTPRFP10586 1907 aa6.37□□□□□ -1.39
NHLRC3-205ENST00000485407 PHIPQ8WWQ0 1821 aa6.36□□□□□ -1.39
NHLRC3-205ENST00000485407 A0A0G2JLL6 359 aaPredicted RBP6.36□□□□□ -1.39
NHLRC3-205ENST00000485407 A6NNZ2 444 aa6.36□□□□□ -1.39
NHLRC3-205ENST00000485407 ARNTLO00327 626 aa6.36□□□□□ -1.39
NHLRC3-205ENST00000485407 FOXP2O15409 715 aa6.36□□□□□ -1.39
NHLRC3-205ENST00000485407 ZBED1O96006 694 aa6.36□□□□□ -1.39
NHLRC3-205ENST00000485407 TYRP1P17643 537 aa6.36□□□□□ -1.39
NHLRC3-205ENST00000485407 PPARAQ07869 468 aa6.36□□□□□ -1.39
NHLRC3-205ENST00000485407 TRIM14Q14142 442 aa6.36□□□□□ -1.39
NHLRC3-205ENST00000485407 KRT72Q14CN4 511 aa6.36□□□□□ -1.39
NHLRC3-205ENST00000485407 FAM109BQ6ICB4 259 aaPredicted RBP6.36□□□□□ -1.39
NHLRC3-205ENST00000485407 FDX2Q6P4F2 183 aa6.36□□□□□ -1.39
NHLRC3-205ENST00000485407 CRTC3Q6UUV7 619 aa6.36□□□□□ -1.39
NHLRC3-205ENST00000485407 ACAD11Q709F0 780 aa6.36□□□□□ -1.39
NHLRC3-205ENST00000485407 PRRT2Q7Z6L0 340 aaPredicted RBP6.36□□□□□ -1.39
NHLRC3-205ENST00000485407 ZNF589Q86UQ0 364 aaPredicted RBP6.36□□□□□ -1.39
NHLRC3-205ENST00000485407 CAMKK1Q8N5S9 505 aa6.36□□□□□ -1.39
NHLRC3-205ENST00000485407 FAM156AQ8NDB6 213 aa6.36□□□□□ -1.39
NHLRC3-205ENST00000485407 JADE3Q92613 823 aa6.36□□□□□ -1.39
NHLRC3-205ENST00000485407 TMEM169Q96HH4 297 aa6.36□□□□□ -1.39
NHLRC3-205ENST00000485407 CHAMP1Q96JM3 812 aa6.36□□□□□ -1.39
NHLRC3-205ENST00000485407 CCDC138Q96M89 665 aa6.36□□□□□ -1.39
NHLRC3-205ENST00000485407 MAP3K14Q99558 947 aa6.36□□□□□ -1.39
NHLRC3-205ENST00000485407 SELENOOQ9BVL4 669 aa6.36□□□□□ -1.39
NHLRC3-205ENST00000485407 MS4A5Q9H3V2 200 aa6.36□□□□□ -1.39
NHLRC3-205ENST00000485407 RNF41Q9H4P4 317 aaPredicted RBP6.36□□□□□ -1.39
NHLRC3-205ENST00000485407 PCIF1Q9H4Z3 704 aa6.36□□□□□ -1.39
NHLRC3-205ENST00000485407 SUGCTQ9HAC7 445 aa6.36□□□□□ -1.39
NHLRC3-205ENST00000485407 MKNK2Q9HBH9 465 aa6.36□□□□□ -1.39
NHLRC3-205ENST00000485407 EPB41L4AQ9HCS5 686 aaPredicted RBP6.36□□□□□ -1.39
NHLRC3-205ENST00000485407 CCM2LQ9NUG4 571 aaPredicted RBP6.36□□□□□ -1.39
NHLRC3-205ENST00000485407 DNAJC28Q9NX36 388 aa6.36□□□□□ -1.39
NHLRC3-205ENST00000485407 ZNF69Q9UC07 566 aa6.36□□□□□ -1.39
NHLRC3-205ENST00000485407 CBLCQ9ULV8 474 aa6.36□□□□□ -1.39
NHLRC3-205ENST00000485407 TPX2Q9ULW0 747 aaKnown RBP6.36□□□□□ -1.39
NHLRC3-205ENST00000485407 SYNPO2Q9UMS6 1093 aa6.36□□□□□ -1.39
NHLRC3-205ENST00000485407 PCDHGB6Q9Y5F9 930 aa6.36□□□□□ -1.39
NHLRC3-205ENST00000485407 PCDHA11Q9Y5I1 949 aa6.36□□□□□ -1.39
NHLRC3-205ENST00000485407 RPS6KL1Q9Y6S9 549 aa6.36□□□□□ -1.39
NHLRC3-205ENST00000485407 SCINQ9Y6U3 715 aa6.36□□□□□ -1.39
NHLRC3-205ENST00000485407 CCL15-CCL14A0A0B4J2E2 113 aa6.35□□□□□ -1.39
NHLRC3-205ENST00000485407 SLC12A8A0AV02 714 aa6.35□□□□□ -1.39
NHLRC3-205ENST00000485407 SGSM2O43147 1006 aa6.35□□□□□ -1.39
NHLRC3-205ENST00000485407 EPB41L2O43491 1005 aaKnown RBP6.35□□□□□ -1.39
NHLRC3-205ENST00000485407 ORC4O43929 436 aa6.35□□□□□ -1.39
NHLRC3-205ENST00000485407 WISP1O95388 367 aa6.35□□□□□ -1.39
NHLRC3-205ENST00000485407 GH2P01242 217 aa6.35□□□□□ -1.39
NHLRC3-205ENST00000485407 SPATA31C1P0DKV0 1188 aa6.35□□□□□ -1.39
NHLRC3-205ENST00000485407 COL6A1P12109 1028 aa6.35□□□□□ -1.39
NHLRC3-205ENST00000485407 IFNGR1P15260 489 aa6.35□□□□□ -1.39
NHLRC3-205ENST00000485407 KRT15P19012 456 aa6.35□□□□□ -1.39
NHLRC3-205ENST00000485407 RAB6AP20340 208 aa6.35□□□□□ -1.39
NHLRC3-205ENST00000485407 RENBPP51606 427 aa6.35□□□□□ -1.39
NHLRC3-205ENST00000485407 BACE1P56817 501 aa6.35□□□□□ -1.39
NHLRC3-205ENST00000485407 SETQ01105 290 aaPredicted RBP6.35□□□□□ -1.39
NHLRC3-205ENST00000485407 SPP2Q13103 211 aa6.35□□□□□ -1.39
NHLRC3-205ENST00000485407 COL9A3Q14050 684 aaPredicted RBP6.35□□□□□ -1.39
NHLRC3-205ENST00000485407 RRP1BQ14684 758 aaKnown RBP6.35□□□□□ -1.39
NHLRC3-205ENST00000485407 TESK1Q15569 626 aa6.35□□□□□ -1.39
NHLRC3-205ENST00000485407 CCL15Q16663 113 aa6.35□□□□□ -1.39
NHLRC3-205ENST00000485407 KIAA0753Q2KHM9 967 aa6.35□□□□□ -1.39
NHLRC3-205ENST00000485407 CCDC129Q6ZRS4 1044 aa6.35□□□□□ -1.39
NHLRC3-205ENST00000485407 ANKRD23Q86SG2 305 aa6.35□□□□□ -1.39
NHLRC3-205ENST00000485407 ZNF444Q8N0Y2 327 aaPredicted RBP6.35□□□□□ -1.39
NHLRC3-205ENST00000485407 KIAA1958Q8N8K9 716 aa6.35□□□□□ -1.39
NHLRC3-205ENST00000485407 RCBTB1Q8NDN9 531 aa6.35□□□□□ -1.39
NHLRC3-205ENST00000485407 CD99L2Q8TCZ2 262 aa6.35□□□□□ -1.39
NHLRC3-205ENST00000485407 BRI3BPQ8WY22 251 aa6.35□□□□□ -1.39
NHLRC3-205ENST00000485407 SHISA4Q96DD7 197 aa6.35□□□□□ -1.39
NHLRC3-205ENST00000485407 DYNLL2Q96FJ2 89 aa6.35□□□□□ -1.39
NHLRC3-205ENST00000485407 TRMT2BQ96GJ1 504 aaKnown RBP6.35□□□□□ -1.39
NHLRC3-205ENST00000485407 C12orf42Q96LP6 360 aa6.35□□□□□ -1.39
NHLRC3-205ENST00000485407 FCRL3Q96P31 734 aaPredicted RBP6.35□□□□□ -1.39
NHLRC3-205ENST00000485407 ELF4Q99607 663 aaPredicted RBP6.35□□□□□ -1.39
NHLRC3-205ENST00000485407 KCNJ15Q99712 375 aa6.35□□□□□ -1.39
NHLRC3-205ENST00000485407 GDF15Q99988 308 aa6.35□□□□□ -1.39
NHLRC3-205ENST00000485407 BOCQ9BWV1 1114 aa6.35□□□□□ -1.39
NHLRC3-205ENST00000485407 GSX1Q9H4S2 264 aaPredicted RBP6.35□□□□□ -1.39
NHLRC3-205ENST00000485407 SH2D4AQ9H788 454 aa6.35□□□□□ -1.39
NHLRC3-205ENST00000485407 FNIP2Q9P278 1114 aa6.35□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms