RNA–Protein interactions for RNA: ENST00000485397.1

COL27A1-205, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 5

Gene COL27A1, Length 463 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-205ENST00000485397 WDR27A2RRH5 827 aa21.05■□□□□ 0.96
COL27A1-205ENST00000485397 RHOP08100 348 aa21.05■□□□□ 0.96
COL27A1-205ENST00000485397 GLULP15104 373 aa21.05■□□□□ 0.96
COL27A1-205ENST00000485397 STARD6P59095 220 aa21.05■□□□□ 0.96
COL27A1-205ENST00000485397 ATP2C1P98194 919 aaPredicted RBP21.05■□□□□ 0.96
COL27A1-205ENST00000485397 SLC5A9Q2M3M2 681 aa21.05■□□□□ 0.96
COL27A1-205ENST00000485397 SLC8B1Q6J4K2 584 aa21.05■□□□□ 0.96
COL27A1-205ENST00000485397 POTEHQ6S545 545 aa21.05■□□□□ 0.96
COL27A1-205ENST00000485397 ZNF461Q8TAF7 563 aa21.05■□□□□ 0.96
COL27A1-205ENST00000485397 SPIRE2Q8WWL2 714 aa21.05■□□□□ 0.96
COL27A1-205ENST00000485397 MCRS1Q96EZ8 462 aa21.05■□□□□ 0.96
COL27A1-205ENST00000485397 MRPS23Q9Y3D9 190 aaKnown RBP21.05■□□□□ 0.96
COL27A1-205ENST00000485397 NUB1Q9Y5A7 615 aa21.05■□□□□ 0.96
COL27A1-205ENST00000485397 R4GN57 208 aa21.05■□□□□ 0.96
COL27A1-205ENST00000485397 TBC1D4O60343 1298 aa21.04■□□□□ 0.96
COL27A1-205ENST00000485397 ABLIM3O94929 683 aa21.04■□□□□ 0.96
COL27A1-205ENST00000485397 PLS3P13797 630 aa21.04■□□□□ 0.96
COL27A1-205ENST00000485397 SLC10A6Q3KNW5 377 aa21.04■□□□□ 0.96
COL27A1-205ENST00000485397 SLC44A4Q53GD3 710 aa21.04■□□□□ 0.96
COL27A1-205ENST00000485397 RILPL1Q5EBL4 403 aa21.04■□□□□ 0.96
COL27A1-205ENST00000485397 HYIQ5T013 277 aa21.04■□□□□ 0.96
COL27A1-205ENST00000485397 TMEM130Q8N3G9 435 aa21.04■□□□□ 0.96
COL27A1-205ENST00000485397 TMEM161BQ8NDZ6 487 aa21.04■□□□□ 0.96
COL27A1-205ENST00000485397 PJA1Q8NG27 643 aa21.04■□□□□ 0.96
COL27A1-205ENST00000485397 TIPINQ9BVW5 301 aa21.04■□□□□ 0.96
COL27A1-205ENST00000485397 ANKFY1Q9P2R3 1169 aa21.04■□□□□ 0.96
COL27A1-205ENST00000485397 COL4A3Q01955 1670 aa21.04■□□□□ 0.96
COL27A1-205ENST00000485397 MYH15Q9Y2K3 1946 aa21.04■□□□□ 0.96
COL27A1-205ENST00000485397 ARHGEF37A1IGU5 675 aa21.03■□□□□ 0.96
COL27A1-205ENST00000485397 SYN3O14994 580 aa21.03■□□□□ 0.96
COL27A1-205ENST00000485397 ELF1P32519 619 aa21.03■□□□□ 0.96
COL27A1-205ENST00000485397 RPL9P32969 192 aaKnown RBP21.03■□□□□ 0.96
COL27A1-205ENST00000485397 CACNB1Q02641 598 aaPredicted RBP21.03■□□□□ 0.96
COL27A1-205ENST00000485397 STRN3Q13033 797 aa21.03■□□□□ 0.96
COL27A1-205ENST00000485397 MRPL58Q14197 206 aaKnown RBP21.03■□□□□ 0.96
COL27A1-205ENST00000485397 MLF2Q15773 248 aaPredicted RBP21.03■□□□□ 0.96
COL27A1-205ENST00000485397 SYT2Q8N9I0 419 aaPredicted RBP21.03■□□□□ 0.96
COL27A1-205ENST00000485397 SHDQ96IW2 340 aa21.03■□□□□ 0.96
COL27A1-205ENST00000485397 FBXL5Q9UKA1 691 aa21.03■□□□□ 0.96
COL27A1-205ENST00000485397 NPHP3-ACAD11A0A0J9YXS1 232 aa21.02■□□□□ 0.96
COL27A1-205ENST00000485397 KANSL1LA0AUZ9 987 aa21.02■□□□□ 0.96
COL27A1-205ENST00000485397 VWA3AA6NCI4 1184 aa21.02■□□□□ 0.96
COL27A1-205ENST00000485397 H7C4K7 107 aa21.02■□□□□ 0.96
COL27A1-205ENST00000485397 PRRG1O14668 218 aa21.02■□□□□ 0.96
COL27A1-205ENST00000485397 TOM1L1O75674 476 aa21.02■□□□□ 0.96
COL27A1-205ENST00000485397 SEC24AO95486 1093 aa21.02■□□□□ 0.96
COL27A1-205ENST00000485397 LRG1P02750 347 aa21.02■□□□□ 0.96
COL27A1-205ENST00000485397 PLA2G4BP0C869 781 aa21.02■□□□□ 0.96
COL27A1-205ENST00000485397 MAPTP10636 758 aaKnown RBP21.02■□□□□ 0.96
COL27A1-205ENST00000485397 CEBPBP17676 345 aa21.02■□□□□ 0.96
COL27A1-205ENST00000485397 PTPN2P17706 415 aa21.02■□□□□ 0.96
COL27A1-205ENST00000485397 SMTNP53814 917 aa21.02■□□□□ 0.96
COL27A1-205ENST00000485397 SLC12A3P55017 1021 aa21.02■□□□□ 0.96
COL27A1-205ENST00000485397 NOLC1Q14978 699 aaKnown RBP eCLIP21.02■□□□□ 0.96
COL27A1-205ENST00000485397 RABEP1Q15276 862 aa21.02■□□□□ 0.96
COL27A1-205ENST00000485397 C1orf210Q8IVY1 113 aa21.02■□□□□ 0.96
COL27A1-205ENST00000485397 KCNG4Q8TDN1 519 aa21.02■□□□□ 0.96
COL27A1-205ENST00000485397 PLA2G2FQ9BZM2 168 aa21.02■□□□□ 0.96
COL27A1-205ENST00000485397 CYP4F11Q9HBI6 524 aa21.02■□□□□ 0.96
COL27A1-205ENST00000485397 TUBGCP4Q9UGJ1 667 aa21.02■□□□□ 0.96
COL27A1-205ENST00000485397 MTF2Q9Y483 593 aaPredicted RBP21.02■□□□□ 0.96
COL27A1-205ENST00000485397 KIF3AQ9Y496 699 aa21.02■□□□□ 0.96
COL27A1-205ENST00000485397 DMDP11532 3685 aa21.01■□□□□ 0.95
COL27A1-205ENST00000485397 SP9P0CG40 484 aa21.01■□□□□ 0.95
COL27A1-205ENST00000485397 ATF2P15336 505 aa21.01■□□□□ 0.95
COL27A1-205ENST00000485397 MCM4P33991 863 aa21.01■□□□□ 0.95
COL27A1-205ENST00000485397 SPAG1Q07617 926 aa21.01■□□□□ 0.95
COL27A1-205ENST00000485397 CTXN3Q4LDR2 81 aa21.01■□□□□ 0.95
COL27A1-205ENST00000485397 TCEAL4Q96EI5 215 aa21.01■□□□□ 0.95
COL27A1-205ENST00000485397 TMX3Q96JJ7 454 aa21.01■□□□□ 0.95
COL27A1-205ENST00000485397 SUSD3Q96L08 255 aa21.01■□□□□ 0.95
COL27A1-205ENST00000485397 TBC1D32Q96NH3 1257 aa21.01■□□□□ 0.95
COL27A1-205ENST00000485397 CORO1BQ9BR76 489 aa21.01■□□□□ 0.95
COL27A1-205ENST00000485397 DDX23Q9BUQ8 820 aaKnown RBP21.01■□□□□ 0.95
COL27A1-205ENST00000485397 HAPLN2Q9GZV7 340 aa21.01■□□□□ 0.95
COL27A1-205ENST00000485397 AVENQ9NQS1 362 aaPredicted RBP21.01■□□□□ 0.95
COL27A1-205ENST00000485397 GDE1Q9NZC3 331 aa21.01■□□□□ 0.95
COL27A1-205ENST00000485397 CD72P21854 359 aa21■□□□□ 0.95
COL27A1-205ENST00000485397 GJB2P29033 226 aa21■□□□□ 0.95
COL27A1-205ENST00000485397 PFKPQ01813 784 aa21■□□□□ 0.95
COL27A1-205ENST00000485397 PRKCQQ04759 706 aa21■□□□□ 0.95
COL27A1-205ENST00000485397 MCL1Q07820 350 aa21■□□□□ 0.95
COL27A1-205ENST00000485397 TMEM119Q4V9L6 283 aa21■□□□□ 0.95
COL27A1-205ENST00000485397 ARSHQ5FYA8 562 aa21■□□□□ 0.95
COL27A1-205ENST00000485397 TANGO2Q6ICL3 276 aa21■□□□□ 0.95
COL27A1-205ENST00000485397 ZPBP2Q6X784 338 aa21■□□□□ 0.95
COL27A1-205ENST00000485397 TCEAL8Q8IYN2 117 aa21■□□□□ 0.95
COL27A1-205ENST00000485397 DDX12PQ92771 950 aa21■□□□□ 0.95
COL27A1-205ENST00000485397 CDK5RAP3Q96JB5 506 aa21■□□□□ 0.95
COL27A1-205ENST00000485397 KCNG1Q9UIX4 513 aa21■□□□□ 0.95
COL27A1-205ENST00000485397 INSL5Q9Y5Q6 135 aa21■□□□□ 0.95
COL27A1-205ENST00000485397 CITO14578 2027 aa21■□□□□ 0.95
COL27A1-205ENST00000485397 H3BQV1 296 aa20.99■□□□□ 0.95
COL27A1-205ENST00000485397 NRG2O14511 850 aaPredicted RBP20.99■□□□□ 0.95
COL27A1-205ENST00000485397 CLDN3O15551 220 aa20.99■□□□□ 0.95
COL27A1-205ENST00000485397 ECI2O75521 394 aa20.99■□□□□ 0.95
COL27A1-205ENST00000485397 CD2BP2O95400 341 aaKnown RBP20.99■□□□□ 0.95
COL27A1-205ENST00000485397 LMNAP02545 664 aaKnown RBP20.99■□□□□ 0.95
COL27A1-205ENST00000485397 CXCL8P10145 99 aa20.99■□□□□ 0.95
COL27A1-205ENST00000485397 MATR3P43243 847 aaKnown RBP eCLIP20.99■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 68.1 ms