RNA–Protein interactions for RNA: ENST00000485275.2

LRIF1-202, Transcript of ligand dependent nuclear receptor interacting factor 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene LRIF1, Length 1,796 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRIF1-202ENST00000485275 PLEKHA5Q9HAU0 1116 aa15.7■□□□□ 0.1
LRIF1-202ENST00000485275 RGS18Q9NS28 235 aa15.7■□□□□ 0.1
LRIF1-202ENST00000485275 TMEM39AQ9NV64 488 aa15.7■□□□□ 0.1
LRIF1-202ENST00000485275 PARP2Q9UGN5 583 aa15.7■□□□□ 0.1
LRIF1-202ENST00000485275 C2CD2Q9Y426 696 aa15.7■□□□□ 0.1
LRIF1-202ENST00000485275 LTBP2Q14767 1821 aa15.69■□□□□ 0.1
LRIF1-202ENST00000485275 SCN1AP35498 2009 aa15.69■□□□□ 0.1
LRIF1-202ENST00000485275 SMIM28A0A1B0GU29 152 aa15.69■□□□□ 0.1
LRIF1-202ENST00000485275 C9IYK1 514 aa15.69■□□□□ 0.1
LRIF1-202ENST00000485275 ZNF623O75123 536 aa15.69■□□□□ 0.1
LRIF1-202ENST00000485275 ZBED6P86452 979 aa15.69■□□□□ 0.1
LRIF1-202ENST00000485275 SOX4Q06945 474 aaPredicted RBP15.69■□□□□ 0.1
LRIF1-202ENST00000485275 NCOA4Q13772 614 aa15.69■□□□□ 0.1
LRIF1-202ENST00000485275 PDXDC1Q6P996 788 aa15.69■□□□□ 0.1
LRIF1-202ENST00000485275 CNGA4Q8IV77 575 aa15.69■□□□□ 0.1
LRIF1-202ENST00000485275 KIF12Q96FN5 646 aa15.69■□□□□ 0.1
LRIF1-202ENST00000485275 ARID3AQ99856 593 aa15.69■□□□□ 0.1
LRIF1-202ENST00000485275 FBXL5Q9UKA1 691 aa15.69■□□□□ 0.1
LRIF1-202ENST00000485275 LUC7L2Q9Y383 392 aaKnown RBP15.69■□□□□ 0.1
LRIF1-202ENST00000485275 PPEF2O14830 753 aa15.68■□□□□ 0.1
LRIF1-202ENST00000485275 ITGB3P05106 788 aa15.68■□□□□ 0.1
LRIF1-202ENST00000485275 IBSPP21815 317 aaPredicted RBP15.68■□□□□ 0.1
LRIF1-202ENST00000485275 FECHP22830 423 aa15.68■□□□□ 0.1
LRIF1-202ENST00000485275 AP3M2P53677 418 aa15.68■□□□□ 0.1
LRIF1-202ENST00000485275 YARSP54577 528 aaKnown RBP15.68■□□□□ 0.1
LRIF1-202ENST00000485275 MYL6P60660 151 aa15.68■□□□□ 0.1
LRIF1-202ENST00000485275 ECHDC2Q86YB7 292 aa15.68■□□□□ 0.1
LRIF1-202ENST00000485275 ANKRD36BP1Q96IX9 119 aa15.68■□□□□ 0.1
LRIF1-202ENST00000485275 GAD1Q99259 594 aa15.68■□□□□ 0.1
LRIF1-202ENST00000485275 TSPYL2Q9H2G4 693 aaPredicted RBP15.68■□□□□ 0.1
LRIF1-202ENST00000485275 GOLGA2P5Q9HBQ8 144 aa15.68■□□□□ 0.1
LRIF1-202ENST00000485275 MIOSQ9NXC5 875 aa15.68■□□□□ 0.1
LRIF1-202ENST00000485275 DNAJC12Q9UKB3 198 aa15.68■□□□□ 0.1
LRIF1-202ENST00000485275 NUB1Q9Y5A7 615 aa15.68■□□□□ 0.1
LRIF1-202ENST00000485275 ASS1P00966 412 aaKnown RBP15.67■□□□□ 0.1
LRIF1-202ENST00000485275 ITGA4P13612 1032 aa15.67■□□□□ 0.1
LRIF1-202ENST00000485275 KCNE1P15382 129 aa15.67■□□□□ 0.1
LRIF1-202ENST00000485275 RAB27AP51159 221 aa15.67■□□□□ 0.1
LRIF1-202ENST00000485275 CETN1Q12798 172 aa15.67■□□□□ 0.1
LRIF1-202ENST00000485275 NAB2Q15742 525 aa15.67■□□□□ 0.1
LRIF1-202ENST00000485275 DEFB128Q7Z7B8 93 aa15.67■□□□□ 0.1
LRIF1-202ENST00000485275 CD302Q8IX05 232 aa15.67■□□□□ 0.1
LRIF1-202ENST00000485275 PANX2Q96RD6 677 aa15.67■□□□□ 0.1
LRIF1-202ENST00000485275 CACNG4Q9UBN1 327 aa15.67■□□□□ 0.1
LRIF1-202ENST00000485275 PYCARDQ9ULZ3 195 aa15.67■□□□□ 0.1
LRIF1-202ENST00000485275 TDRD15B5MCY1 1934 aaKnown RBP15.67■□□□□ 0.1
LRIF1-202ENST00000485275 LAMA2P24043 3122 aaKnown RBP15.67■□□□□ 0.1
LRIF1-202ENST00000485275 ARL5CA6NH57 179 aa15.67■□□□□ 0.1
LRIF1-202ENST00000485275 F8VZ95 297 aa15.67■□□□□ 0.1
LRIF1-202ENST00000485275 TNNC2P02585 160 aa15.67■□□□□ 0.1
LRIF1-202ENST00000485275 IGFBP6P24592 240 aaPredicted RBP15.67■□□□□ 0.1
LRIF1-202ENST00000485275 POLR2BP30876 1174 aaKnown RBP15.67■□□□□ 0.1
LRIF1-202ENST00000485275 NOP14P78316 857 aaKnown RBP15.67■□□□□ 0.1
LRIF1-202ENST00000485275 RAPGEF1Q13905 1077 aa15.67■□□□□ 0.1
LRIF1-202ENST00000485275 MEA1Q16626 185 aa15.67■□□□□ 0.1
LRIF1-202ENST00000485275 CACNA2D4Q7Z3S7 1137 aa15.67■□□□□ 0.1
LRIF1-202ENST00000485275 RNF169Q8NCN4 708 aa15.67■□□□□ 0.1
LRIF1-202ENST00000485275 IQCDQ96DY2 449 aa15.67■□□□□ 0.1
LRIF1-202ENST00000485275 PPP1R10Q96QC0 940 aaKnown RBP15.67■□□□□ 0.1
LRIF1-202ENST00000485275 CHP1Q99653 195 aa15.67■□□□□ 0.1
LRIF1-202ENST00000485275 EDEM3Q9BZQ6 932 aa15.67■□□□□ 0.1
LRIF1-202ENST00000485275 UBE2TQ9NPD8 197 aaPredicted RBP15.67■□□□□ 0.1
LRIF1-202ENST00000485275 PRDM5Q9NQX1 630 aaPredicted RBP15.67■□□□□ 0.1
LRIF1-202ENST00000485275 DERAQ9Y315 318 aa15.67■□□□□ 0.1
LRIF1-202ENST00000485275 COL4A6Q14031 1691 aa15.67■□□□□ 0.1
LRIF1-202ENST00000485275 LOC101059915A0A1B0GWI6 518 aaPredicted RBP15.66■□□□□ 0.1
LRIF1-202ENST00000485275 KIAA0355O15063 1070 aa15.66■□□□□ 0.1
LRIF1-202ENST00000485275 PHACTR2O75167 634 aa15.66■□□□□ 0.1
LRIF1-202ENST00000485275 PLEKP08567 350 aaPredicted RBP15.66■□□□□ 0.1
LRIF1-202ENST00000485275 CAPN2P17655 700 aa15.66■□□□□ 0.1
LRIF1-202ENST00000485275 HNRNPH3P31942 346 aaKnown RBP15.66■□□□□ 0.1
LRIF1-202ENST00000485275 SCNN1GP51170 649 aa15.66■□□□□ 0.1
LRIF1-202ENST00000485275 FAM189BP81408 668 aa15.66■□□□□ 0.1
LRIF1-202ENST00000485275 MTF1Q14872 753 aa15.66■□□□□ 0.1
LRIF1-202ENST00000485275 DRAP1Q14919 205 aaPredicted RBP15.66■□□□□ 0.1
LRIF1-202ENST00000485275 HGSNATQ68CP4 663 aa15.66■□□□□ 0.1
LRIF1-202ENST00000485275 SLC24A5Q71RS6 500 aa15.66■□□□□ 0.1
LRIF1-202ENST00000485275 NT5DC4Q86YG4 428 aa15.66■□□□□ 0.1
LRIF1-202ENST00000485275 PPM1KQ8N3J5 372 aa15.66■□□□□ 0.1
LRIF1-202ENST00000485275 OR8K1Q8NGG5 319 aa15.66■□□□□ 0.1
LRIF1-202ENST00000485275 NT5C1BQ96P26 610 aa15.66■□□□□ 0.1
LRIF1-202ENST00000485275 DPP3Q9NY33 737 aa15.66■□□□□ 0.1
LRIF1-202ENST00000485275 TTC3P53804 2025 aa15.65■□□□□ 0.1
LRIF1-202ENST00000485275 SOWAHDA6NJG2 315 aa15.65■□□□□ 0.1
LRIF1-202ENST00000485275 ENPP3O14638 875 aa15.65■□□□□ 0.1
LRIF1-202ENST00000485275 ZC3H11AO75152 810 aaKnown RBP eCLIP15.65■□□□□ 0.12e-11■■□□□ 14.2
LRIF1-202ENST00000485275 KRT19P08727 400 aa15.65■□□□□ 0.1
LRIF1-202ENST00000485275 TPM1P09493 284 aa15.65■□□□□ 0.1
LRIF1-202ENST00000485275 ARHGAP44Q17R89 818 aa15.65■□□□□ 0.1
LRIF1-202ENST00000485275 HS1BP3Q53T59 392 aa15.65■□□□□ 0.1
LRIF1-202ENST00000485275 CLLU1OSQ5K130 101 aa15.65■□□□□ 0.1
LRIF1-202ENST00000485275 CRIPAKQ8N1N5 446 aa15.65■□□□□ 0.1
LRIF1-202ENST00000485275 SEPT8Q92599 483 aa15.65■□□□□ 0.1
LRIF1-202ENST00000485275 FTHL17Q9BXU8 183 aa15.65■□□□□ 0.1
LRIF1-202ENST00000485275 RSAD1Q9HA92 442 aa15.65■□□□□ 0.1
LRIF1-202ENST00000485275 GIT1Q9Y2X7 761 aa15.65■□□□□ 0.1
LRIF1-202ENST00000485275 PTPRSQ13332 1948 aa15.65■□□□□ 0.1
LRIF1-202ENST00000485275 B4GALT3O60512 393 aa15.64■□□□□ 0.1
LRIF1-202ENST00000485275 TIMP1P01033 207 aa15.64■□□□□ 0.1
LRIF1-202ENST00000485275 FGFR1P11362 822 aa15.64■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 108.8 ms