RNA–Protein interactions for RNA: ENST00000484328.1

NCL-209, Transcript of nucleolin, humanhuman

TSL 2

Gene NCL, Length 369 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCL-209ENST00000484328 PRKCSHP14314 528 aaPredicted RBP6.95□□□□□ -1.3
NCL-209ENST00000484328 FMO5P49326 533 aa6.95□□□□□ -1.3
NCL-209ENST00000484328 AARSP49588 968 aaKnown RBP eCLIP6.95□□□□□ -1.3
NCL-209ENST00000484328 KRT31Q15323 416 aa6.95□□□□□ -1.3
NCL-209ENST00000484328 MAN2A1Q16706 1144 aa6.95□□□□□ -1.3
NCL-209ENST00000484328 UPP1Q16831 310 aa6.95□□□□□ -1.3
NCL-209ENST00000484328 TPD52L1Q16890 204 aaPredicted RBP6.95□□□□□ -1.3
NCL-209ENST00000484328 DUOXA2Q1HG44 320 aa6.95□□□□□ -1.3
NCL-209ENST00000484328 CCDC40Q4G0X9 1142 aa6.95□□□□□ -1.3
NCL-209ENST00000484328 CBWD6Q4V339 395 aa6.95□□□□□ -1.3
NCL-209ENST00000484328 DCAF17Q5H9S7 520 aaPredicted RBP6.95□□□□□ -1.3
NCL-209ENST00000484328 CBWD3Q5JTY5 395 aa6.95□□□□□ -1.3
NCL-209ENST00000484328 CBWD5Q5RIA9 395 aa6.95□□□□□ -1.3
NCL-209ENST00000484328 PRPF38BQ5VTL8 546 aaKnown RBP6.95□□□□□ -1.3
NCL-209ENST00000484328 TDRD10Q5VZ19 366 aaKnown RBP6.95□□□□□ -1.3
NCL-209ENST00000484328 SV2AQ7L0J3 742 aa6.95□□□□□ -1.3
NCL-209ENST00000484328 TRAPPC11Q7Z392 1133 aa6.95□□□□□ -1.3
NCL-209ENST00000484328 ZNF280BQ86YH2 543 aa6.95□□□□□ -1.3
NCL-209ENST00000484328 LRRC52Q8N7C0 313 aa6.95□□□□□ -1.3
NCL-209ENST00000484328 BEST2Q8NFU1 509 aa6.95□□□□□ -1.3
NCL-209ENST00000484328 C18orf25Q96B23 403 aaPredicted RBP6.95□□□□□ -1.3
NCL-209ENST00000484328 CCDC127Q96BQ5 260 aa6.95□□□□□ -1.3
NCL-209ENST00000484328 KIF12Q96FN5 646 aa6.95□□□□□ -1.3
NCL-209ENST00000484328 FAM84AQ96KN4 292 aa6.95□□□□□ -1.3
NCL-209ENST00000484328 POP1Q99575 1024 aaKnown RBP6.95□□□□□ -1.3
NCL-209ENST00000484328 RAD9AQ99638 391 aa6.95□□□□□ -1.3
NCL-209ENST00000484328 PAAF1Q9BRP4 392 aa6.95□□□□□ -1.3
NCL-209ENST00000484328 TUBGCP2Q9BSJ2 902 aa6.95□□□□□ -1.3
NCL-209ENST00000484328 NRDE2Q9H7Z3 1164 aa6.95□□□□□ -1.3
NCL-209ENST00000484328 VRTNQ9H8Y1 702 aa6.95□□□□□ -1.3
NCL-209ENST00000484328 GOLGA2P5Q9HBQ8 144 aa6.95□□□□□ -1.3
NCL-209ENST00000484328 TMEM8AQ9HCN3 771 aa6.95□□□□□ -1.3
NCL-209ENST00000484328 MARCH5Q9NX47 278 aa6.95□□□□□ -1.3
NCL-209ENST00000484328 MAGEC2Q9UBF1 373 aaPredicted RBP6.95□□□□□ -1.3
NCL-209ENST00000484328 DNAJB4Q9UDY4 337 aa6.95□□□□□ -1.3
NCL-209ENST00000484328 SIX4Q9UIU6 781 aa6.95□□□□□ -1.3
NCL-209ENST00000484328 INPP5FQ9Y2H2 1132 aa6.95□□□□□ -1.3
NCL-209ENST00000484328 PCDHA11Q9Y5I1 949 aa6.95□□□□□ -1.3
NCL-209ENST00000484328 MRPL42Q9Y6G3 142 aaKnown RBP6.95□□□□□ -1.3
NCL-209ENST00000484328 HSFX4A0A1B0GTS1 333 aaPredicted RBP6.94□□□□□ -1.3
NCL-209ENST00000484328 HSFX3A0A1B0GWH4 333 aaPredicted RBP6.94□□□□□ -1.3
NCL-209ENST00000484328 LINC01553A4QN01 128 aa6.94□□□□□ -1.3
NCL-209ENST00000484328 CARNS1A5YM72 827 aa6.94□□□□□ -1.3
NCL-209ENST00000484328 LGALS16A8MUM7 142 aa6.94□□□□□ -1.3
NCL-209ENST00000484328 BECN2A8MW95 431 aa6.94□□□□□ -1.3
NCL-209ENST00000484328 GRXCR1A8MXD5 290 aa6.94□□□□□ -1.3
NCL-209ENST00000484328 GOLGA6L19H0YKK7 550 aa6.94□□□□□ -1.3
NCL-209ENST00000484328 PPEF2O14830 753 aa6.94□□□□□ -1.3
NCL-209ENST00000484328 TLL1O43897 1013 aa6.94□□□□□ -1.3
NCL-209ENST00000484328 N4BP1O75113 896 aaKnown RBP6.94□□□□□ -1.3
NCL-209ENST00000484328 ARHGEF15O94989 841 aa6.94□□□□□ -1.3
NCL-209ENST00000484328 KIF4AO95239 1232 aa6.94□□□□□ -1.3
NCL-209ENST00000484328 VNN1O95497 513 aa6.94□□□□□ -1.3
NCL-209ENST00000484328 ASS1P00966 412 aaKnown RBP6.94□□□□□ -1.3
NCL-209ENST00000484328 TNNC2P02585 160 aa6.94□□□□□ -1.3
NCL-209ENST00000484328 AFPP02771 609 aaKnown RBP6.94□□□□□ -1.3
NCL-209ENST00000484328 ITGB3P05106 788 aa6.94□□□□□ -1.3
NCL-209ENST00000484328 TMEM191BP0C7N4 346 aa6.94□□□□□ -1.3
NCL-209ENST00000484328 LAG3P18627 525 aa6.94□□□□□ -1.3
NCL-209ENST00000484328 TNNI1P19237 187 aa6.94□□□□□ -1.3
NCL-209ENST00000484328 PAX3P23760 479 aa6.94□□□□□ -1.3
NCL-209ENST00000484328 RPL9P32969 192 aaKnown RBP6.94□□□□□ -1.3
NCL-209ENST00000484328 GCLMP48507 274 aa6.94□□□□□ -1.3
NCL-209ENST00000484328 SLC11A1P49279 550 aa6.94□□□□□ -1.3
NCL-209ENST00000484328 MXI1P50539 228 aa6.94□□□□□ -1.3
NCL-209ENST00000484328 GUCY2FP51841 1108 aa6.94□□□□□ -1.3
NCL-209ENST00000484328 RABGGTBP53611 331 aa6.94□□□□□ -1.3
NCL-209ENST00000484328 SMAD3P84022 425 aaKnown RBP6.94□□□□□ -1.3
NCL-209ENST00000484328 TFAMQ00059 246 aaKnown RBP6.94□□□□□ -1.3
NCL-209ENST00000484328 RNASELQ05823 741 aaKnown RBP6.94□□□□□ -1.3
NCL-209ENST00000484328 KCNH2Q12809 1159 aa6.94□□□□□ -1.3
NCL-209ENST00000484328 BTG3Q14201 252 aaPredicted RBP6.94□□□□□ -1.3
NCL-209ENST00000484328 RAB30Q15771 203 aa6.94□□□□□ -1.3
NCL-209ENST00000484328 LRIT3Q3SXY7 679 aa6.94□□□□□ -1.3
NCL-209ENST00000484328 VWA3BQ502W6 1294 aa6.94□□□□□ -1.3
NCL-209ENST00000484328 PAN2Q504Q3 1202 aaKnown RBP6.94□□□□□ -1.3
NCL-209ENST00000484328 EPC2Q52LR7 807 aa6.94□□□□□ -1.3
NCL-209ENST00000484328 HSP90AA4PQ58FG1 418 aa6.94□□□□□ -1.3
NCL-209ENST00000484328 C9orf57Q5W0N0 161 aa6.94□□□□□ -1.3
NCL-209ENST00000484328 LMBRD2Q68DH5 695 aaPredicted RBP6.94□□□□□ -1.3
NCL-209ENST00000484328 KRT39Q6A163 491 aa6.94□□□□□ -1.3
NCL-209ENST00000484328 FAM117BQ6P1L5 589 aa6.94□□□□□ -1.3
NCL-209ENST00000484328 CD300LGQ6UXG3 332 aa6.94□□□□□ -1.3
NCL-209ENST00000484328 RNF168Q8IYW5 571 aaPredicted RBP6.94□□□□□ -1.3
NCL-209ENST00000484328 C3orf58Q8NDZ4 430 aa6.94□□□□□ -1.3
NCL-209ENST00000484328 CACTINQ8WUQ7 758 aaKnown RBP6.94□□□□□ -1.3
NCL-209ENST00000484328 FAM212AQ96EL1 285 aa6.94□□□□□ -1.3
NCL-209ENST00000484328 DDX27Q96GQ7 796 aaKnown RBP6.94□□□□□ -1.3
NCL-209ENST00000484328 ANKRD36BP1Q96IX9 119 aa6.94□□□□□ -1.3
NCL-209ENST00000484328 FNBP1Q96RU3 617 aa6.94□□□□□ -1.3
NCL-209ENST00000484328 PBX4Q9BYU1 374 aa6.94□□□□□ -1.3
NCL-209ENST00000484328 XYLT2Q9H1B5 865 aa6.94□□□□□ -1.3
NCL-209ENST00000484328 RBSNQ9H1K0 784 aa6.94□□□□□ -1.3
NCL-209ENST00000484328 NDST4Q9H3R1 872 aa6.94□□□□□ -1.3
NCL-209ENST00000484328 DPP3Q9NY33 737 aa6.94□□□□□ -1.3
NCL-209ENST00000484328 YBX2Q9Y2T7 364 aaKnown RBP6.94□□□□□ -1.3
NCL-209ENST00000484328 UTP18Q9Y5J1 556 aaKnown RBP eCLIP6.94□□□□□ -1.33e-20■□□□□ 9.3
NCL-209ENST00000484328 TRANK1O15050 2925 aa6.94□□□□□ -1.3
NCL-209ENST00000484328 LAMA2P24043 3122 aaKnown RBP6.93□□□□□ -1.3
NCL-209ENST00000484328 A0A1B0GTH6 734 aa6.93□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms