RNA–Protein interactions for RNA: ENST00000484087.5

BRCA1-216, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 1,495 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-216ENST00000484087 PHKA2P46019 1235 aa7.53□□□□□ -1.2
BRCA1-216ENST00000484087 MAPK7Q13164 816 aa7.53□□□□□ -1.2
BRCA1-216ENST00000484087 ADAM9Q13443 819 aa7.53□□□□□ -1.2
BRCA1-216ENST00000484087 CLUL1Q15846 466 aa7.53□□□□□ -1.2
BRCA1-216ENST00000484087 TCEAL5Q5H9L2 206 aa7.53□□□□□ -1.2
BRCA1-216ENST00000484087 FIGNQ5HY92 759 aa7.53□□□□□ -1.2
BRCA1-216ENST00000484087 ODR4Q5SWX8 454 aa7.53□□□□□ -1.2
BRCA1-216ENST00000484087 CEP135Q66GS9 1140 aa7.53□□□□□ -1.2
BRCA1-216ENST00000484087 CYP26C1Q6V0L0 522 aa7.53□□□□□ -1.2
BRCA1-216ENST00000484087 AGMOQ6ZNB7 445 aa7.53□□□□□ -1.2
BRCA1-216ENST00000484087 EP400NLQ6ZTU2 488 aa7.53□□□□□ -1.2
BRCA1-216ENST00000484087 HS2ST1Q7LGA3 356 aa7.53□□□□□ -1.2
BRCA1-216ENST00000484087 ZNF598Q86UK7 904 aaKnown RBP7.53□□□□□ -1.2
BRCA1-216ENST00000484087 CMTR2Q8IYT2 770 aaKnown RBP7.53□□□□□ -1.2
BRCA1-216ENST00000484087 DAW1Q8N136 415 aa7.53□□□□□ -1.2
BRCA1-216ENST00000484087 TMEM130Q8N3G9 435 aa7.53□□□□□ -1.2
BRCA1-216ENST00000484087 OR8K1Q8NGG5 319 aa7.53□□□□□ -1.2
BRCA1-216ENST00000484087 ZNF507Q8TCN5 953 aa7.53□□□□□ -1.2
BRCA1-216ENST00000484087 BCL7CQ8WUZ0 217 aaPredicted RBP7.53□□□□□ -1.2
BRCA1-216ENST00000484087 RABGGTAQ92696 567 aa7.53□□□□□ -1.2
BRCA1-216ENST00000484087 COL25A1Q9BXS0 654 aaPredicted RBP7.53□□□□□ -1.2
BRCA1-216ENST00000484087 NXF3Q9H4D5 531 aaKnown RBP7.53□□□□□ -1.2
BRCA1-216ENST00000484087 METTL14Q9HCE5 456 aaKnown RBP7.53□□□□□ -1.2
BRCA1-216ENST00000484087 C1orf112Q9NSG2 853 aa7.53□□□□□ -1.2
BRCA1-216ENST00000484087 ABHD10Q9NUJ1 306 aa7.53□□□□□ -1.2
BRCA1-216ENST00000484087 FAM105AQ9NUU6 356 aa7.53□□□□□ -1.2
BRCA1-216ENST00000484087 TMEM161AQ9NX61 479 aa7.53□□□□□ -1.2
BRCA1-216ENST00000484087 TRMT1Q9NXH9 659 aaKnown RBP7.53□□□□□ -1.2
BRCA1-216ENST00000484087 DNAJB4Q9UDY4 337 aa7.53□□□□□ -1.2
BRCA1-216ENST00000484087 KCNG1Q9UIX4 513 aa7.53□□□□□ -1.2
BRCA1-216ENST00000484087 TRAF3IP3Q9Y228 551 aa7.53□□□□□ -1.2
BRCA1-216ENST00000484087 UTP18Q9Y5J1 556 aaKnown RBP eCLIP7.53□□□□□ -1.2
BRCA1-216ENST00000484087 CUL9Q8IWT3 2517 aa7.52□□□□□ -1.21
BRCA1-216ENST00000484087 A0A0U1RQF3 1178 aa7.52□□□□□ -1.21
BRCA1-216ENST00000484087 H3BQ06 376 aaPredicted RBP7.52□□□□□ -1.21
BRCA1-216ENST00000484087 SLC16A3O15427 465 aaKnown RBP7.52□□□□□ -1.21
BRCA1-216ENST00000484087 HIP1RO75146 1068 aa7.52□□□□□ -1.21
BRCA1-216ENST00000484087 ZC3H11AO75152 810 aaKnown RBP eCLIP7.52□□□□□ -1.21
BRCA1-216ENST00000484087 ERLIN2O94905 339 aa7.52□□□□□ -1.21
BRCA1-216ENST00000484087 PRPF6O94906 941 aaKnown RBP7.52□□□□□ -1.21
BRCA1-216ENST00000484087 IPO7O95373 1038 aaKnown RBP7.52□□□□□ -1.21
BRCA1-216ENST00000484087 NPTXRO95502 500 aa7.52□□□□□ -1.21
BRCA1-216ENST00000484087 POMCP01189 267 aa7.52□□□□□ -1.21
BRCA1-216ENST00000484087 CCDC175P0C221 793 aa7.52□□□□□ -1.21
BRCA1-216ENST00000484087 MAPTP10636 758 aaKnown RBP7.52□□□□□ -1.21
BRCA1-216ENST00000484087 EPB41P11171 864 aaKnown RBP7.52□□□□□ -1.21
BRCA1-216ENST00000484087 NR2F2P24468 414 aa7.52□□□□□ -1.21
BRCA1-216ENST00000484087 AKAP5P24588 427 aa7.52□□□□□ -1.21
BRCA1-216ENST00000484087 MLH1P40692 756 aa7.52□□□□□ -1.21
BRCA1-216ENST00000484087 ZNF131P52739 623 aa7.52□□□□□ -1.21
BRCA1-216ENST00000484087 PTENP60484 403 aa7.52□□□□□ -1.21
BRCA1-216ENST00000484087 FAM189BP81408 668 aa7.52□□□□□ -1.21
BRCA1-216ENST00000484087 DLX2Q07687 328 aaPredicted RBP7.52□□□□□ -1.21
BRCA1-216ENST00000484087 SYCP1Q15431 976 aa7.52□□□□□ -1.21
BRCA1-216ENST00000484087 ZCWPW2Q504Y3 356 aa7.52□□□□□ -1.21
BRCA1-216ENST00000484087 EEF1DP3Q658K8 133 aa7.52□□□□□ -1.21
BRCA1-216ENST00000484087 E4F1Q66K89 784 aaPredicted RBP7.52□□□□□ -1.21
BRCA1-216ENST00000484087 EPM2AIP1Q7L775 607 aaPredicted RBP7.52□□□□□ -1.21
BRCA1-216ENST00000484087 FRMD5Q7Z6J6 570 aa7.52□□□□□ -1.21
BRCA1-216ENST00000484087 RBM23Q86U06 439 aaKnown RBP7.52□□□□□ -1.21
BRCA1-216ENST00000484087 ZNF280BQ86YH2 543 aa7.52□□□□□ -1.21
BRCA1-216ENST00000484087 SYCP3Q8IZU3 236 aa7.52□□□□□ -1.21
BRCA1-216ENST00000484087 COLGALT1Q8NBJ5 622 aa7.52□□□□□ -1.21
BRCA1-216ENST00000484087 SMG8Q8ND04 991 aaKnown RBP7.52□□□□□ -1.21
BRCA1-216ENST00000484087 KIF18AQ8NI77 898 aa7.52□□□□□ -1.21
BRCA1-216ENST00000484087 FEZF2Q8TBJ5 459 aa7.52□□□□□ -1.21
BRCA1-216ENST00000484087 POF1BQ8WVV4 589 aa7.52□□□□□ -1.21
BRCA1-216ENST00000484087 TCP11Q8WWU5 503 aa7.52□□□□□ -1.21
BRCA1-216ENST00000484087 AUTS2Q8WXX7 1259 aa7.52□□□□□ -1.21
BRCA1-216ENST00000484087 CLP1Q92989 425 aaKnown RBP7.52□□□□□ -1.21
BRCA1-216ENST00000484087 EEF2KMTQ96G04 330 aa7.52□□□□□ -1.21
BRCA1-216ENST00000484087 PPP1R13BQ96KQ4 1090 aa7.52□□□□□ -1.21
BRCA1-216ENST00000484087 ZFP42Q96MM3 310 aa7.52□□□□□ -1.21
BRCA1-216ENST00000484087 ERGIC2Q96RQ1 377 aa7.52□□□□□ -1.21
BRCA1-216ENST00000484087 JPH2Q9BR39 696 aaPredicted RBP7.52□□□□□ -1.21
BRCA1-216ENST00000484087 KCTD10Q9H3F6 313 aa7.52□□□□□ -1.21
BRCA1-216ENST00000484087 IGFLR1Q9H665 355 aa7.52□□□□□ -1.21
BRCA1-216ENST00000484087 TMEM206Q9H813 350 aa7.52□□□□□ -1.21
BRCA1-216ENST00000484087 KLK14Q9P0G3 267 aa7.52□□□□□ -1.21
BRCA1-216ENST00000484087 THEGQ9P2T0 379 aa7.52□□□□□ -1.21
BRCA1-216ENST00000484087 CAPN11Q9UMQ6 739 aa7.52□□□□□ -1.21
BRCA1-216ENST00000484087 PLAGL2Q9UPG8 496 aa7.52□□□□□ -1.21
BRCA1-216ENST00000484087 IPPQ9Y573 584 aa7.52□□□□□ -1.21
BRCA1-216ENST00000484087 PCDHB2Q9Y5E7 798 aa7.52□□□□□ -1.21
BRCA1-216ENST00000484087 PLXNA3P51805 1871 aa7.52□□□□□ -1.21
BRCA1-216ENST00000484087 PDCD11Q14690 1871 aaKnown RBP7.51□□□□□ -1.21
BRCA1-216ENST00000484087 A0A1W2PQJ5 194 aa7.51□□□□□ -1.21
BRCA1-216ENST00000484087 C5orf67F2Z3F1 127 aa7.51□□□□□ -1.21
BRCA1-216ENST00000484087 PER2O15055 1255 aa7.51□□□□□ -1.21
BRCA1-216ENST00000484087 DDHD2O94830 711 aa7.51□□□□□ -1.21
BRCA1-216ENST00000484087 NR3C1P04150 777 aa7.51□□□□□ -1.21
BRCA1-216ENST00000484087 MYBP10242 640 aa7.51□□□□□ -1.21
BRCA1-216ENST00000484087 ABCD1P33897 745 aa7.51□□□□□ -1.21
BRCA1-216ENST00000484087 SMTNP53814 917 aa7.51□□□□□ -1.21
BRCA1-216ENST00000484087 MARSP56192 900 aaKnown RBP7.51□□□□□ -1.21
BRCA1-216ENST00000484087 PEX3P56589 373 aa7.51□□□□□ -1.21
BRCA1-216ENST00000484087 ERVFC1P60507 584 aa7.51□□□□□ -1.21
BRCA1-216ENST00000484087 ZBED6P86452 979 aa7.51□□□□□ -1.21
BRCA1-216ENST00000484087 GOLGA8FQ08AF8 430 aa7.51□□□□□ -1.21
BRCA1-216ENST00000484087 GOLGA8DPQ0D2H9 430 aa7.51□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms