RNA–Protein interactions for RNA: ENST00000483723.5

CLK3-204, Transcript of CDC like kinase 3, humanhuman

TSL 2

Gene CLK3, Length 1,749 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-204ENST00000483723 MTMR12Q9C0I1 747 aa15.09■□□□□ 0.01
CLK3-204ENST00000483723 SPC25Q9HBM1 224 aa15.09■□□□□ 0.01
CLK3-204ENST00000483723 ANKRD62A6NC57 917 aa15.09■□□□□ 0.01
CLK3-204ENST00000483723 BUB1O43683 1085 aa15.09■□□□□ 0.01
CLK3-204ENST00000483723 CST5P28325 142 aaPredicted RBP15.09■□□□□ 0.01
CLK3-204ENST00000483723 BPIFB4P59827 614 aa15.09■□□□□ 0.01
CLK3-204ENST00000483723 TMEM62Q0P6H9 643 aa15.09■□□□□ 0.01
CLK3-204ENST00000483723 MAP3K21Q5TCX8 1036 aa15.09■□□□□ 0.01
CLK3-204ENST00000483723 CCSAPQ6IQ19 270 aaPredicted RBP15.09■□□□□ 0.01
CLK3-204ENST00000483723 CD302Q8IX05 232 aa15.09■□□□□ 0.01
CLK3-204ENST00000483723 C7orf31Q8N865 590 aa15.09■□□□□ 0.01
CLK3-204ENST00000483723 CXorf38Q8TB03 319 aa15.09■□□□□ 0.01
CLK3-204ENST00000483723 ANKRD36BP1Q96IX9 119 aa15.09■□□□□ 0.01
CLK3-204ENST00000483723 ARID3AQ99856 593 aa15.09■□□□□ 0.01
CLK3-204ENST00000483723 ADPGKQ9BRR6 497 aa15.09■□□□□ 0.01
CLK3-204ENST00000483723 XYLT2Q9H1B5 865 aa15.09■□□□□ 0.01
CLK3-204ENST00000483723 TAS2R14Q9NYV8 317 aa15.09■□□□□ 0.01
CLK3-204ENST00000483723 GTF2IRD1Q9UHL9 959 aa15.09■□□□□ 0.01
CLK3-204ENST00000483723 SAR1BQ9Y6B6 198 aa15.09■□□□□ 0.01
CLK3-204ENST00000483723 NCANO14594 1321 aa15.09■□□□□ 0.01
CLK3-204ENST00000483723 ENC1O14682 589 aa15.08■□□□□ 0
CLK3-204ENST00000483723 RTN2O75298 545 aa15.08■□□□□ 0
CLK3-204ENST00000483723 TADA3O75528 432 aa15.08■□□□□ 0
CLK3-204ENST00000483723 TRPA1O75762 1119 aa15.08■□□□□ 0
CLK3-204ENST00000483723 PGK1P00558 417 aa15.08■□□□□ 0
CLK3-204ENST00000483723 TNNC2P02585 160 aa15.08■□□□□ 0
CLK3-204ENST00000483723 TMEM191BP0C7N4 346 aa15.08■□□□□ 0
CLK3-204ENST00000483723 FGFR4P22455 802 aa15.08■□□□□ 0
CLK3-204ENST00000483723 CCND3P30281 292 aaPredicted RBP15.08■□□□□ 0
CLK3-204ENST00000483723 CRYBB1P53674 252 aaPredicted RBP15.08■□□□□ 0
CLK3-204ENST00000483723 MYL6P60660 151 aa15.08■□□□□ 0
CLK3-204ENST00000483723 TFAMQ00059 246 aaKnown RBP15.08■□□□□ 0
CLK3-204ENST00000483723 NCBP1Q09161 790 aaKnown RBP15.08■□□□□ 0
CLK3-204ENST00000483723 SNX17Q15036 470 aa15.08■□□□□ 0
CLK3-204ENST00000483723 IFI16Q16666 785 aaKnown RBP15.08■□□□□ 0
CLK3-204ENST00000483723 MROH7Q68CQ1 1323 aa15.08■□□□□ 0
CLK3-204ENST00000483723 TAF2Q6P1X5 1199 aa15.08■□□□□ 0
CLK3-204ENST00000483723 APBB1IPQ7Z5R6 666 aaPredicted RBP15.08■□□□□ 0
CLK3-204ENST00000483723 SESTD1Q86VW0 696 aa15.08■□□□□ 0
CLK3-204ENST00000483723 ZNF677Q86XU0 584 aa15.08■□□□□ 0
CLK3-204ENST00000483723 DNAAF5Q86Y56 855 aa15.08■□□□□ 0
CLK3-204ENST00000483723 NT5DC4Q86YG4 428 aa15.08■□□□□ 0
CLK3-204ENST00000483723 CEP112Q8N8E3 955 aa15.08■□□□□ 0
CLK3-204ENST00000483723 TSC1Q92574 1164 aa15.08■□□□□ 0
CLK3-204ENST00000483723 TAF4BQ92750 862 aa15.08■□□□□ 0
CLK3-204ENST00000483723 ACAP3Q96P50 834 aa15.08■□□□□ 0
CLK3-204ENST00000483723 OSMRQ99650 979 aa15.08■□□□□ 0
CLK3-204ENST00000483723 ACP6Q9NPH0 428 aa15.08■□□□□ 0
CLK3-204ENST00000483723 PCDHB2Q9Y5E7 798 aa15.08■□□□□ 0
CLK3-204ENST00000483723 UMODL1Q5DID0 1318 aa15.07■□□□□ 0
CLK3-204ENST00000483723 EFCAB8A8MWE9 144 aa15.07■□□□□ 0
CLK3-204ENST00000483723 GNRH1P01148 92 aa15.07■□□□□ 0
CLK3-204ENST00000483723 MMEP08473 750 aa15.07■□□□□ 0
CLK3-204ENST00000483723 HADHBP55084 474 aaKnown RBP15.07■□□□□ 0
CLK3-204ENST00000483723 NAA30Q147X3 362 aaPredicted RBP15.07■□□□□ 0
CLK3-204ENST00000483723 NBPF20Q3BBV1 942 aa15.07■□□□□ 0
CLK3-204ENST00000483723 SLC27A1Q6PCB7 646 aa15.07■□□□□ 0
CLK3-204ENST00000483723 CXCL17Q6UXB2 119 aa15.07■□□□□ 0
CLK3-204ENST00000483723 RSRC2Q7L4I2 434 aaKnown RBP15.07■□□□□ 0
CLK3-204ENST00000483723 CATSPER4Q7RTX7 472 aa15.07■□□□□ 0
CLK3-204ENST00000483723 SLFN11Q7Z7L1 901 aa15.07■□□□□ 0
CLK3-204ENST00000483723 MNS1Q8NEH6 495 aa15.07■□□□□ 0
CLK3-204ENST00000483723 CD99L2Q8TCZ2 262 aa15.07■□□□□ 0
CLK3-204ENST00000483723 PXYLP1Q8TE99 480 aa15.07■□□□□ 0
CLK3-204ENST00000483723 IMPG2Q9BZV3 1241 aa15.07■□□□□ 0
CLK3-204ENST00000483723 PLEKHA5Q9HAU0 1116 aa15.07■□□□□ 0
CLK3-204ENST00000483723 SIX4Q9UIU6 781 aa15.07■□□□□ 0
CLK3-204ENST00000483723 SNX12Q9UMY4 172 aa15.07■□□□□ 0
CLK3-204ENST00000483723 C2CD2Q9Y426 696 aa15.07■□□□□ 0
CLK3-204ENST00000483723 CITO14578 2027 aa15.07■□□□□ 0
CLK3-204ENST00000483723 GRID2IPA4D2P6 1211 aa15.06■□□□□ 0
CLK3-204ENST00000483723 PALMO75781 387 aa15.06■□□□□ 0
CLK3-204ENST00000483723 FTLP02792 175 aaPredicted RBP15.06■□□□□ 0
CLK3-204ENST00000483723 NFICP08651 508 aa15.06■□□□□ 0
CLK3-204ENST00000483723 KRT5P13647 590 aa15.06■□□□□ 0
CLK3-204ENST00000483723 PRKAR2AP13861 404 aaKnown RBP15.06■□□□□ 0
CLK3-204ENST00000483723 ELNP15502 786 aa15.06■□□□□ 0
CLK3-204ENST00000483723 PDE6CP51160 858 aa15.06■□□□□ 0
CLK3-204ENST00000483723 ZNF132P52740 706 aa15.06■□□□□ 0
CLK3-204ENST00000483723 TRPC3Q13507 836 aa15.06■□□□□ 0
CLK3-204ENST00000483723 JADE1Q6IE81 842 aa15.06■□□□□ 0
CLK3-204ENST00000483723 NOTUMQ6P988 496 aa15.06■□□□□ 0
CLK3-204ENST00000483723 RPAINQ86UA6 219 aa15.06■□□□□ 0
CLK3-204ENST00000483723 C1orf127Q8N9H9 656 aa15.06■□□□□ 0
CLK3-204ENST00000483723 LRRC57Q8N9N7 239 aa15.06■□□□□ 0
CLK3-204ENST00000483723 TPCN2Q8NHX9 752 aa15.06■□□□□ 0
CLK3-204ENST00000483723 TMEM40Q8WWA1 233 aa15.06■□□□□ 0
CLK3-204ENST00000483723 CALR3Q96L12 384 aaKnown RBP15.06■□□□□ 0
CLK3-204ENST00000483723 TLR10Q9BXR5 811 aa15.06■□□□□ 0
CLK3-204ENST00000483723 VRTNQ9H8Y1 702 aa15.06■□□□□ 0
CLK3-204ENST00000483723 XPNPEP3Q9NQH7 507 aa15.06■□□□□ 0
CLK3-204ENST00000483723 RALGAPA2Q2PPJ7 1873 aa15.06■□□□□ 0
CLK3-204ENST00000483723 HMGCRP04035 888 aa15.06■□□□□ 0
CLK3-204ENST00000483723 VEGFBP49765 207 aa15.06■□□□□ 0
CLK3-204ENST00000483723 MEI1Q5TIA1 1274 aa15.06■□□□□ 0
CLK3-204ENST00000483723 RFFLQ8WZ73 363 aa15.06■□□□□ 0
CLK3-204ENST00000483723 ANKRD7Q92527 254 aa15.06■□□□□ 0
CLK3-204ENST00000483723 CELF4Q9BZC1 486 aaKnown RBP15.06■□□□□ 0
CLK3-204ENST00000483723 NIF3L1Q9GZT8 377 aa15.06■□□□□ 0
CLK3-204ENST00000483723 TSKSQ9UJT2 592 aa15.06■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms