RNA–Protein interactions for RNA: ENST00000483506.1

HDAC6-225, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-225ENST00000483506 HASPINQ8TF76 798 aa19.58■□□□□ 0.72
HDAC6-225ENST00000483506 SCFD1Q8WVM8 642 aa19.58■□□□□ 0.72
HDAC6-225ENST00000483506 FNIP2Q9P278 1114 aa19.58■□□□□ 0.72
HDAC6-225ENST00000483506 UBQLN1Q9UMX0 589 aaKnown RBP19.58■□□□□ 0.72
HDAC6-225ENST00000483506 FAM50BQ9Y247 325 aa19.58■□□□□ 0.72
HDAC6-225ENST00000483506 BDP1A6H8Y1 2624 aa19.58■□□□□ 0.72
HDAC6-225ENST00000483506 MBTPS2O43462 519 aa19.57■□□□□ 0.72
HDAC6-225ENST00000483506 ZNF202O95125 648 aa19.57■□□□□ 0.72
HDAC6-225ENST00000483506 HOXB8P17481 243 aaPredicted RBP19.57■□□□□ 0.72
HDAC6-225ENST00000483506 FGFR3P22607 806 aa19.57■□□□□ 0.72
HDAC6-225ENST00000483506 IGFBP6P24592 240 aaPredicted RBP19.57■□□□□ 0.72
HDAC6-225ENST00000483506 CA8P35219 290 aa19.57■□□□□ 0.72
HDAC6-225ENST00000483506 CLCN4P51793 760 aa19.57■□□□□ 0.72
HDAC6-225ENST00000483506 SNRPFP62306 86 aaKnown RBP19.57■□□□□ 0.72
HDAC6-225ENST00000483506 CREMQ03060 361 aa19.57■□□□□ 0.72
HDAC6-225ENST00000483506 RTP2Q5QGT7 225 aa19.57■□□□□ 0.72
HDAC6-225ENST00000483506 FAM171A1Q5VUB5 890 aa19.57■□□□□ 0.72
HDAC6-225ENST00000483506 KIAA1841Q6NSI8 718 aa19.57■□□□□ 0.72
HDAC6-225ENST00000483506 PDZRN4Q6ZMN7 1036 aaPredicted RBP19.57■□□□□ 0.72
HDAC6-225ENST00000483506 PIK3R5Q8WYR1 880 aa19.57■□□□□ 0.72
HDAC6-225ENST00000483506 KIF12Q96FN5 646 aa19.57■□□□□ 0.72
HDAC6-225ENST00000483506 TTPALQ9BTX7 342 aa19.57■□□□□ 0.72
HDAC6-225ENST00000483506 TUBGCP4Q9UGJ1 667 aa19.57■□□□□ 0.72
HDAC6-225ENST00000483506 C2CD2Q9Y426 696 aa19.57■□□□□ 0.72
HDAC6-225ENST00000483506 C2CD2LO14523 706 aa19.56■□□□□ 0.72
HDAC6-225ENST00000483506 TEX28O15482 410 aa19.56■□□□□ 0.72
HDAC6-225ENST00000483506 XPOTO43592 962 aaKnown RBP19.56■□□□□ 0.72
HDAC6-225ENST00000483506 TRAPPC3O43617 180 aa19.56■□□□□ 0.72
HDAC6-225ENST00000483506 LDHAP00338 332 aaKnown RBP19.56■□□□□ 0.72
HDAC6-225ENST00000483506 ADH1AP07327 375 aa19.56■□□□□ 0.72
HDAC6-225ENST00000483506 PSMD2Q13200 908 aa19.56■□□□□ 0.72
HDAC6-225ENST00000483506 SMAD2Q15796 467 aaKnown RBP19.56■□□□□ 0.72
HDAC6-225ENST00000483506 SPATA1Q5VX52 437 aa19.56■□□□□ 0.72
HDAC6-225ENST00000483506 PDXDC1Q6P996 788 aa19.56■□□□□ 0.72
HDAC6-225ENST00000483506 SYCE2Q6PIF2 218 aa19.56■□□□□ 0.72
HDAC6-225ENST00000483506 FMR1NBQ8N0W7 255 aaPredicted RBP19.56■□□□□ 0.72
HDAC6-225ENST00000483506 TMEM87AQ8NBN3 555 aa19.56■□□□□ 0.72
HDAC6-225ENST00000483506 B3GALT6Q96L58 329 aa19.56■□□□□ 0.72
HDAC6-225ENST00000483506 CBWD1Q9BRT8 395 aa19.56■□□□□ 0.72
HDAC6-225ENST00000483506 S1PR5Q9H228 398 aa19.56■□□□□ 0.72
HDAC6-225ENST00000483506 DZANK1Q9NVP4 752 aa19.56■□□□□ 0.72
HDAC6-225ENST00000483506 TGFB1I1O43294 461 aa19.55■□□□□ 0.72
HDAC6-225ENST00000483506 EXTL3O43909 919 aa19.55■□□□□ 0.72
HDAC6-225ENST00000483506 IL18RAPO95256 599 aa19.55■□□□□ 0.72
HDAC6-225ENST00000483506 IL9P15248 144 aa19.55■□□□□ 0.72
HDAC6-225ENST00000483506 PLXNA3P51805 1871 aa19.55■□□□□ 0.72
HDAC6-225ENST00000483506 SPAG1Q07617 926 aa19.55■□□□□ 0.72
HDAC6-225ENST00000483506 DPYDQ12882 1025 aa19.55■□□□□ 0.72
HDAC6-225ENST00000483506 CLUL1Q15846 466 aa19.55■□□□□ 0.72
HDAC6-225ENST00000483506 KMT5BQ4FZB7 885 aa19.55■□□□□ 0.72
HDAC6-225ENST00000483506 JADE1Q6IE81 842 aa19.55■□□□□ 0.72
HDAC6-225ENST00000483506 LLGL2Q6P1M3 1020 aa19.55■□□□□ 0.72
HDAC6-225ENST00000483506 NT5DC4Q86YG4 428 aa19.55■□□□□ 0.72
HDAC6-225ENST00000483506 BRSK2Q8IWQ3 736 aa19.55■□□□□ 0.72
HDAC6-225ENST00000483506 ENGASEQ8NFI3 743 aa19.55■□□□□ 0.72
HDAC6-225ENST00000483506 LNX1Q8TBB1 728 aaPredicted RBP19.55■□□□□ 0.72
HDAC6-225ENST00000483506 RIN2Q8WYP3 895 aaPredicted RBP19.55■□□□□ 0.72
HDAC6-225ENST00000483506 SUSD6Q92537 303 aa19.55■□□□□ 0.72
HDAC6-225ENST00000483506 SLC39A2Q9NP94 309 aa19.55■□□□□ 0.72
HDAC6-225ENST00000483506 EXOC1Q9NV70 894 aa19.55■□□□□ 0.72
HDAC6-225ENST00000483506 CHMP5Q9NZZ3 219 aa19.55■□□□□ 0.72
HDAC6-225ENST00000483506 C5orf42Q9H799 3197 aa19.54■□□□□ 0.72
HDAC6-225ENST00000483506 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP19.54■□□□□ 0.72
HDAC6-225ENST00000483506 SYN3O14994 580 aa19.54■□□□□ 0.72
HDAC6-225ENST00000483506 NFICP08651 508 aa19.54■□□□□ 0.72
HDAC6-225ENST00000483506 PRR29P0C7W0 189 aa19.54■□□□□ 0.72
HDAC6-225ENST00000483506 EPCAMP16422 314 aa19.54■□□□□ 0.72
HDAC6-225ENST00000483506 KLRC2P26717 231 aa19.54■□□□□ 0.72
HDAC6-225ENST00000483506 AARSP49588 968 aaKnown RBP eCLIP19.54■□□□□ 0.72
HDAC6-225ENST00000483506 STK4Q13043 487 aa19.54■□□□□ 0.72
HDAC6-225ENST00000483506 SNW1Q13573 536 aaKnown RBP19.54■□□□□ 0.72
HDAC6-225ENST00000483506 TMEM132DQ14C87 1099 aa19.54■□□□□ 0.72
HDAC6-225ENST00000483506 KANK3Q6NY19 840 aa19.54■□□□□ 0.72
HDAC6-225ENST00000483506 ARMCX5Q6P1M9 558 aa19.54■□□□□ 0.72
HDAC6-225ENST00000483506 KIAA0895Q8NCT3 520 aa19.54■□□□□ 0.72
HDAC6-225ENST00000483506 ZSWIM2Q8NEG5 633 aa19.54■□□□□ 0.72
HDAC6-225ENST00000483506 SAAL1Q96ER3 474 aa19.54■□□□□ 0.72
HDAC6-225ENST00000483506 SUSD3Q96L08 255 aa19.54■□□□□ 0.72
HDAC6-225ENST00000483506 FBXL18Q96ME1 805 aa19.54■□□□□ 0.72
HDAC6-225ENST00000483506 UHRF1Q96T88 793 aaPredicted RBP19.54■□□□□ 0.72
HDAC6-225ENST00000483506 FAM213AQ9BRX8 229 aa19.54■□□□□ 0.72
HDAC6-225ENST00000483506 CGNQ9P2M7 1197 aaKnown RBP19.54■□□□□ 0.72
HDAC6-225ENST00000483506 PRKAG3Q9UGI9 489 aa19.54■□□□□ 0.72
HDAC6-225ENST00000483506 MTCL1Q9Y4B5 1905 aaKnown RBP19.53■□□□□ 0.72
HDAC6-225ENST00000483506 GOLGA6L4A6NEF3 574 aa19.53■□□□□ 0.72
HDAC6-225ENST00000483506 RHOBTB3O94955 611 aa19.53■□□□□ 0.72
HDAC6-225ENST00000483506 PAPLNO95428 1278 aa19.53■□□□□ 0.72
HDAC6-225ENST00000483506 RPN1P04843 607 aaKnown RBP19.53■□□□□ 0.72
HDAC6-225ENST00000483506 BRCC3P46736 316 aa19.53■□□□□ 0.72
HDAC6-225ENST00000483506 FAM160A1Q05DH4 1040 aa19.53■□□□□ 0.72
HDAC6-225ENST00000483506 PSMD5Q16401 504 aa19.53■□□□□ 0.72
HDAC6-225ENST00000483506 TPRNQ4KMQ1 711 aa19.53■□□□□ 0.72
HDAC6-225ENST00000483506 PRSS55Q6UWB4 352 aaPredicted RBP19.53■□□□□ 0.72
HDAC6-225ENST00000483506 C12orf56Q8IXR9 622 aa19.53■□□□□ 0.72
HDAC6-225ENST00000483506 GPD1LQ8N335 351 aa19.53■□□□□ 0.72
HDAC6-225ENST00000483506 BEST2Q8NFU1 509 aa19.53■□□□□ 0.72
HDAC6-225ENST00000483506 HDAC7Q8WUI4 952 aa19.53■□□□□ 0.72
HDAC6-225ENST00000483506 TMEM174Q8WUU8 243 aa19.53■□□□□ 0.72
HDAC6-225ENST00000483506 CCDC34Q96HJ3 373 aa19.53■□□□□ 0.72
HDAC6-225ENST00000483506 AGPAT3Q9NRZ7 376 aa19.53■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms