RNA–Protein interactions for RNA: ENST00000483117.1

LAPTM4A-202, Transcript of lysosomal protein transmembrane 4 alpha, humanhuman

TSL 2

Gene LAPTM4A, Length 487 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAPTM4A-202ENST00000483117 GJC2Q5T442 439 aaPredicted RBP4.31□□□□□ -1.72
LAPTM4A-202ENST00000483117 SP5Q6BEB4 398 aaPredicted RBP4.31□□□□□ -1.72
LAPTM4A-202ENST00000483117 FOXR2Q6PJQ5 311 aa4.31□□□□□ -1.72
LAPTM4A-202ENST00000483117 FAM43AQ8N2R8 423 aa4.31□□□□□ -1.72
LAPTM4A-202ENST00000483117 ZGPATQ8N5A5 531 aaKnown RBP4.31□□□□□ -1.72
LAPTM4A-202ENST00000483117 COG1Q8WTW3 980 aa4.31□□□□□ -1.72
LAPTM4A-202ENST00000483117 CASKIN2Q8WXE0 1202 aa4.31□□□□□ -1.72
LAPTM4A-202ENST00000483117 AHCYL2Q96HN2 611 aaKnown RBP4.31□□□□□ -1.72
LAPTM4A-202ENST00000483117 SLC2A13Q96QE2 648 aa4.31□□□□□ -1.72
LAPTM4A-202ENST00000483117 SLKQ9H2G2 1235 aaPredicted RBP4.31□□□□□ -1.72
LAPTM4A-202ENST00000483117 UNKLQ9H9P5 680 aaKnown RBP4.31□□□□□ -1.72
LAPTM4A-202ENST00000483117 TBCCD1Q9NVR7 557 aa4.31□□□□□ -1.72
LAPTM4A-202ENST00000483117 FAM30AQ9NZY2 134 aa4.31□□□□□ -1.72
LAPTM4A-202ENST00000483117 FOXJ2Q9P0K8 574 aa4.31□□□□□ -1.72
LAPTM4A-202ENST00000483117 HSFX1Q9UBD0 423 aa4.31□□□□□ -1.72
LAPTM4A-202ENST00000483117 KCNE5Q9UJ90 142 aa4.31□□□□□ -1.72
LAPTM4A-202ENST00000483117 DNM3Q9UQ16 869 aa4.31□□□□□ -1.72
LAPTM4A-202ENST00000483117 MTO1Q9Y2Z2 717 aaKnown RBP4.31□□□□□ -1.72
LAPTM4A-202ENST00000483117 TCRBV7S2A1N4TA0A589 114 aa4.3□□□□□ -1.72
LAPTM4A-202ENST00000483117 TLDC2A0PJX2 215 aa4.3□□□□□ -1.72
LAPTM4A-202ENST00000483117 GPR32O75388 356 aa4.3□□□□□ -1.72
LAPTM4A-202ENST00000483117 IGLV2-14P01704 120 aa4.3□□□□□ -1.72
LAPTM4A-202ENST00000483117 AMY1AP04745 511 aa4.3□□□□□ -1.72
LAPTM4A-202ENST00000483117 CKBP12277 381 aa4.3□□□□□ -1.72
LAPTM4A-202ENST00000483117 MTNR1BP49286 362 aa4.3□□□□□ -1.72
LAPTM4A-202ENST00000483117 RARRES1P49788 294 aa4.3□□□□□ -1.72
LAPTM4A-202ENST00000483117 SLC5A3P53794 718 aa4.3□□□□□ -1.72
LAPTM4A-202ENST00000483117 ELLP55199 621 aaPredicted RBP4.3□□□□□ -1.72
LAPTM4A-202ENST00000483117 NOMO3P69849 1222 aa4.3□□□□□ -1.72
LAPTM4A-202ENST00000483117 MGAT2Q10469 447 aa4.3□□□□□ -1.72
LAPTM4A-202ENST00000483117 NOMO2Q5JPE7 1267 aa4.3□□□□□ -1.72
LAPTM4A-202ENST00000483117 ARHGEF25Q86VW2 580 aa4.3□□□□□ -1.72
LAPTM4A-202ENST00000483117 DDX55Q8NHQ9 600 aaKnown RBP eCLIP4.3□□□□□ -1.72
LAPTM4A-202ENST00000483117 PTCD3Q96EY7 689 aaKnown RBP4.3□□□□□ -1.72
LAPTM4A-202ENST00000483117 AIFM2Q9BRQ8 373 aa4.3□□□□□ -1.72
LAPTM4A-202ENST00000483117 SPATA5L1Q9BVQ7 753 aa4.3□□□□□ -1.72
LAPTM4A-202ENST00000483117 GSTO2Q9H4Y5 243 aa4.3□□□□□ -1.72
LAPTM4A-202ENST00000483117 LRIT1Q9P2V4 623 aa4.3□□□□□ -1.72
LAPTM4A-202ENST00000483117 CDHR4A6H8M9 788 aa4.29□□□□□ -1.72
LAPTM4A-202ENST00000483117 ERN1O75460 977 aaKnown RBP4.29□□□□□ -1.72
LAPTM4A-202ENST00000483117 MATN4O95460 622 aa4.29□□□□□ -1.72
LAPTM4A-202ENST00000483117 VAV2P52735 878 aa4.29□□□□□ -1.72
LAPTM4A-202ENST00000483117 MTM1Q13496 603 aa4.29□□□□□ -1.72
LAPTM4A-202ENST00000483117 GEN1Q17RS7 908 aa4.29□□□□□ -1.72
LAPTM4A-202ENST00000483117 FITM2Q8N6M3 262 aa4.29□□□□□ -1.72
LAPTM4A-202ENST00000483117 ACTRT2Q8TDY3 377 aa4.29□□□□□ -1.72
LAPTM4A-202ENST00000483117 DPF2Q92785 391 aa4.29□□□□□ -1.72
LAPTM4A-202ENST00000483117 MYBBP1AQ9BQG0 1328 aaKnown RBP4.28□□□□□ -1.72
LAPTM4A-202ENST00000483117 KIAA0391O15091 583 aaKnown RBP4.28□□□□□ -1.72
LAPTM4A-202ENST00000483117 GPR39O43194 453 aa4.28□□□□□ -1.72
LAPTM4A-202ENST00000483117 TEX33O43247 280 aa4.28□□□□□ -1.72
LAPTM4A-202ENST00000483117 C1RP00736 705 aa4.28□□□□□ -1.72
LAPTM4A-202ENST00000483117 DDCP20711 480 aa4.28□□□□□ -1.72
LAPTM4A-202ENST00000483117 HSD3B2P26439 372 aa4.28□□□□□ -1.72
LAPTM4A-202ENST00000483117 ERVK-21P61565 698 aa4.28□□□□□ -1.72
LAPTM4A-202ENST00000483117 MRPS35P82673 323 aaKnown RBP4.28□□□□□ -1.72
LAPTM4A-202ENST00000483117 ATP8B2P98198 1209 aa4.28□□□□□ -1.72
LAPTM4A-202ENST00000483117 SLFN5Q08AF3 891 aa4.28□□□□□ -1.72
LAPTM4A-202ENST00000483117 FAPQ12884 760 aa4.28□□□□□ -1.72
LAPTM4A-202ENST00000483117 GIMAP6Q6P9H5 292 aa4.28□□□□□ -1.72
LAPTM4A-202ENST00000483117 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP4.28□□□□□ -1.72
LAPTM4A-202ENST00000483117 TBC1D15Q8TC07 691 aa4.28□□□□□ -1.72
LAPTM4A-202ENST00000483117 SSH3Q8TE77 659 aa4.28□□□□□ -1.72
LAPTM4A-202ENST00000483117 ZNF384Q8TF68 577 aa4.28□□□□□ -1.72
LAPTM4A-202ENST00000483117 NUP133Q8WUM0 1156 aa4.28□□□□□ -1.72
LAPTM4A-202ENST00000483117 NELL1Q92832 810 aa4.28□□□□□ -1.72
LAPTM4A-202ENST00000483117 RAB24Q969Q5 203 aa4.28□□□□□ -1.72
LAPTM4A-202ENST00000483117 CYFIP2Q96F07 1278 aa4.28□□□□□ -1.72
LAPTM4A-202ENST00000483117 PNKPQ96T60 521 aa4.28□□□□□ -1.72
LAPTM4A-202ENST00000483117 FAM126AQ9BYI3 521 aaPredicted RBP4.28□□□□□ -1.72
LAPTM4A-202ENST00000483117 KLK15Q9H2R5 256 aa4.28□□□□□ -1.72
LAPTM4A-202ENST00000483117 SEMA4GQ9NTN9 838 aa4.28□□□□□ -1.72
LAPTM4A-202ENST00000483117 KCTD5Q9NXV2 234 aa4.28□□□□□ -1.72
LAPTM4A-202ENST00000483117 GPR45Q9Y5Y3 372 aa4.28□□□□□ -1.72
LAPTM4A-202ENST00000483117 MYADML2A6NDP7 307 aa4.27□□□□□ -1.73
LAPTM4A-202ENST00000483117 LRRC3CA6NJW4 275 aa4.27□□□□□ -1.73
LAPTM4A-202ENST00000483117 FAM171A2A8MVW0 826 aa4.27□□□□□ -1.73
LAPTM4A-202ENST00000483117 C1QL1O75973 258 aa4.27□□□□□ -1.73
LAPTM4A-202ENST00000483117 FCER1AP12319 257 aa4.27□□□□□ -1.73
LAPTM4A-202ENST00000483117 ALAS1P13196 640 aa4.27□□□□□ -1.73
LAPTM4A-202ENST00000483117 KRTAP5-9P26371 169 aa4.27□□□□□ -1.73
LAPTM4A-202ENST00000483117 CACNA2D1P54289 1103 aa4.27□□□□□ -1.73
LAPTM4A-202ENST00000483117 SDE2Q6IQ49 451 aa4.27□□□□□ -1.73
LAPTM4A-202ENST00000483117 SPATS2Q86XZ4 545 aaKnown RBP4.27□□□□□ -1.73
LAPTM4A-202ENST00000483117 COLGALT2Q8IYK4 626 aa4.27□□□□□ -1.73
LAPTM4A-202ENST00000483117 LNX2Q8N448 690 aa4.27□□□□□ -1.73
LAPTM4A-202ENST00000483117 PPM1NQ8N819 430 aa4.27□□□□□ -1.73
LAPTM4A-202ENST00000483117 DCBLD1Q8N8Z6 715 aa4.27□□□□□ -1.73
LAPTM4A-202ENST00000483117 Q8NA96 180 aa4.27□□□□□ -1.73
LAPTM4A-202ENST00000483117 WDR66Q8TBY9 1149 aa4.27□□□□□ -1.73
LAPTM4A-202ENST00000483117 NRG4Q8WWG1 115 aa4.27□□□□□ -1.73
LAPTM4A-202ENST00000483117 PDLIM2Q96JY6 352 aa4.27□□□□□ -1.73
LAPTM4A-202ENST00000483117 IL17RBQ9NRM6 502 aa4.27□□□□□ -1.73
LAPTM4A-202ENST00000483117 FRMD4BQ9Y2L6 1034 aa4.27□□□□□ -1.73
LAPTM4A-202ENST00000483117 HMGB1P09429 215 aaKnown RBP4.26□□□□□ -1.73
LAPTM4A-202ENST00000483117 CPEP16870 476 aa4.26□□□□□ -1.73
LAPTM4A-202ENST00000483117 AGXTP21549 392 aa4.26□□□□□ -1.73
LAPTM4A-202ENST00000483117 CNGA1P29973 690 aa4.26□□□□□ -1.73
LAPTM4A-202ENST00000483117 SLC6A4P31645 630 aa4.26□□□□□ -1.73
LAPTM4A-202ENST00000483117 SF3B3Q15393 1217 aaKnown RBP4.26□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms