RNA–Protein interactions for RNA: ENST00000482873.6

DDR1-244, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 5

Gene DDR1, Length 2,673 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-244ENST00000482873 SYNPO2Q9UMS6 1093 aa16.26■□□□□ 0.19
DDR1-244ENST00000482873 WDR46O15213 610 aaKnown RBP16.25■□□□□ 0.19
DDR1-244ENST00000482873 SUN1O94901 812 aa16.25■□□□□ 0.19
DDR1-244ENST00000482873 PYGMP11217 842 aa16.25■□□□□ 0.19
DDR1-244ENST00000482873 CTNNA2P26232 953 aa16.25■□□□□ 0.19
DDR1-244ENST00000482873 HMGCS2P54868 508 aa16.25■□□□□ 0.19
DDR1-244ENST00000482873 GRIK3Q13003 919 aa16.25■□□□□ 0.19
DDR1-244ENST00000482873 SLMAPQ14BN4 828 aa16.25■□□□□ 0.19
DDR1-244ENST00000482873 SEZ6Q53EL9 994 aa16.25■□□□□ 0.19
DDR1-244ENST00000482873 VSTM1Q6UX27 236 aa16.25■□□□□ 0.19
DDR1-244ENST00000482873 ARHGEF2Q92974 986 aaKnown RBP16.25■□□□□ 0.19
DDR1-244ENST00000482873 BICD1Q96G01 975 aa16.25■□□□□ 0.19
DDR1-244ENST00000482873 FAM213AQ9BRX8 229 aa16.25■□□□□ 0.19
DDR1-244ENST00000482873 HNRNPDLO14979 420 aaKnown RBP16.25■□□□□ 0.19
DDR1-244ENST00000482873 GCKP35557 465 aa16.25■□□□□ 0.19
DDR1-244ENST00000482873 MSH2P43246 934 aa16.25■□□□□ 0.19
DDR1-244ENST00000482873 PSMC5P62195 406 aa16.25■□□□□ 0.19
DDR1-244ENST00000482873 GTF2BQ00403 316 aa16.25■□□□□ 0.19
DDR1-244ENST00000482873 SCARA3Q6AZY7 606 aa16.25■□□□□ 0.19
DDR1-244ENST00000482873 SNRNP48Q6IEG0 339 aaKnown RBP16.25■□□□□ 0.19
DDR1-244ENST00000482873 SLC39A4Q6P5W5 647 aa16.25■□□□□ 0.19
DDR1-244ENST00000482873 TMEM161BQ8NDZ6 487 aa16.25■□□□□ 0.19
DDR1-244ENST00000482873 RMDN2Q96LZ7 410 aa16.25■□□□□ 0.19
DDR1-244ENST00000482873 FAM118BQ9BPY3 351 aa16.25■□□□□ 0.19
DDR1-244ENST00000482873 NUP85Q9BW27 656 aa16.25■□□□□ 0.19
DDR1-244ENST00000482873 UBE4BO95155 1302 aa16.25■□□□□ 0.19
DDR1-244ENST00000482873 SPOPO43791 374 aa16.24■□□□□ 0.19
DDR1-244ENST00000482873 ACSL3O95573 720 aa16.24■□□□□ 0.19
DDR1-244ENST00000482873 GH1P01241 217 aa16.24■□□□□ 0.19
DDR1-244ENST00000482873 GPC5P78333 572 aa16.24■□□□□ 0.19
DDR1-244ENST00000482873 SNX1Q13596 522 aa16.24■□□□□ 0.19
DDR1-244ENST00000482873 SPOPLQ6IQ16 392 aa16.24■□□□□ 0.19
DDR1-244ENST00000482873 ASRGL1Q7L266 308 aa16.24■□□□□ 0.19
DDR1-244ENST00000482873 ANKRD42Q8N9B4 389 aa16.24■□□□□ 0.19
DDR1-244ENST00000482873 JDP2Q8WYK2 163 aa16.24■□□□□ 0.19
DDR1-244ENST00000482873 ART4Q93070 314 aa16.24■□□□□ 0.19
DDR1-244ENST00000482873 ZNF653Q96CK0 615 aa16.24■□□□□ 0.19
DDR1-244ENST00000482873 DEFB129Q9H1M3 183 aa16.24■□□□□ 0.19
DDR1-244ENST00000482873 ADAM22Q9P0K1 906 aa16.24■□□□□ 0.19
DDR1-244ENST00000482873 CTNNAL1Q9UBT7 734 aa16.24■□□□□ 0.19
DDR1-244ENST00000482873 PARP2Q9UGN5 583 aa16.24■□□□□ 0.19
DDR1-244ENST00000482873 WDR64B1ANS9 1081 aa16.24■□□□□ 0.19
DDR1-244ENST00000482873 WNT7BP56706 349 aa16.24■□□□□ 0.19
DDR1-244ENST00000482873 MPP2Q14168 576 aa16.24■□□□□ 0.19
DDR1-244ENST00000482873 NLRX1Q86UT6 975 aa16.24■□□□□ 0.19
DDR1-244ENST00000482873 CCDC105Q8IYK2 499 aa16.24■□□□□ 0.19
DDR1-244ENST00000482873 GBP7Q8N8V2 638 aaPredicted RBP16.24■□□□□ 0.19
DDR1-244ENST00000482873 GDAP1Q8TB36 358 aa16.24■□□□□ 0.19
DDR1-244ENST00000482873 MICAL1Q8TDZ2 1067 aa16.24■□□□□ 0.19
DDR1-244ENST00000482873 CDC42EP4Q9H3Q1 356 aaKnown RBP16.24■□□□□ 0.19
DDR1-244ENST00000482873 TBC1D22BQ9NU19 505 aa16.24■□□□□ 0.19
DDR1-244ENST00000482873 SEPT9Q9UHD8 586 aaPredicted RBP16.24■□□□□ 0.19
DDR1-244ENST00000482873 HACL1Q9UJ83 578 aa16.24■□□□□ 0.19
DDR1-244ENST00000482873 VWA5AO00534 786 aa16.23■□□□□ 0.19
DDR1-244ENST00000482873 PLA2G6O60733 806 aa16.23■□□□□ 0.19
DDR1-244ENST00000482873 SMNDC1O75940 238 aaKnown RBP eCLIP16.23■□□□□ 0.19
DDR1-244ENST00000482873 GJB6O95452 261 aa16.23■□□□□ 0.19
DDR1-244ENST00000482873 NR3C2P08235 984 aa16.23■□□□□ 0.19
DDR1-244ENST00000482873 HARSP12081 509 aaKnown RBP16.23■□□□□ 0.19
DDR1-244ENST00000482873 PEX19P40855 299 aa16.23■□□□□ 0.19
DDR1-244ENST00000482873 FMO1Q01740 532 aa16.23■□□□□ 0.19
DDR1-244ENST00000482873 MGAT5Q09328 741 aa16.23■□□□□ 0.19
DDR1-244ENST00000482873 FSTL1Q12841 308 aa16.23■□□□□ 0.19
DDR1-244ENST00000482873 DMP1Q13316 513 aaPredicted RBP16.23■□□□□ 0.19
DDR1-244ENST00000482873 ZNF568Q3ZCX4 644 aa16.23■□□□□ 0.19
DDR1-244ENST00000482873 MTERF2Q49AM1 385 aa16.23■□□□□ 0.19
DDR1-244ENST00000482873 ZC3H12AQ5D1E8 599 aaKnown RBP16.23■□□□□ 0.19
DDR1-244ENST00000482873 ANKRD20A2Q5SQ80 823 aa16.23■□□□□ 0.19
DDR1-244ENST00000482873 ANKRD20A1Q5TYW2 823 aa16.23■□□□□ 0.19
DDR1-244ENST00000482873 ANKRD20A3Q5VUR7 823 aa16.23■□□□□ 0.19
DDR1-244ENST00000482873 SPATA21Q7Z572 469 aa16.23■□□□□ 0.19
DDR1-244ENST00000482873 AGBL3Q8NEM8 1001 aa16.23■□□□□ 0.19
DDR1-244ENST00000482873 PARD3BQ8TEW8 1205 aa16.23■□□□□ 0.19
DDR1-244ENST00000482873 ZSWIM1Q9BR11 485 aa16.23■□□□□ 0.19
DDR1-244ENST00000482873 DNAJC17Q9NVM6 304 aaKnown RBP16.23■□□□□ 0.19
DDR1-244ENST00000482873 RBBP6Q7Z6E9 1792 aaKnown RBP16.23■□□□□ 0.19
DDR1-244ENST00000482873 TP73O15350 636 aa16.23■□□□□ 0.19
DDR1-244ENST00000482873 ZBED4O75132 1171 aa16.23■□□□□ 0.19
DDR1-244ENST00000482873 HMGB2P26583 209 aaKnown RBP16.23■□□□□ 0.19
DDR1-244ENST00000482873 GBP1P32455 592 aa16.23■□□□□ 0.19
DDR1-244ENST00000482873 ACOT2P49753 483 aa16.23■□□□□ 0.19
DDR1-244ENST00000482873 PEX5P50542 639 aa16.23■□□□□ 0.19
DDR1-244ENST00000482873 CLUL1Q15846 466 aa16.23■□□□□ 0.19
DDR1-244ENST00000482873 CDCA2Q69YH5 1023 aaPredicted RBP16.23■□□□□ 0.19
DDR1-244ENST00000482873 SV2AQ7L0J3 742 aa16.23■□□□□ 0.19
DDR1-244ENST00000482873 MICALL2Q8IY33 904 aa16.23■□□□□ 0.19
DDR1-244ENST00000482873 KCTD17Q8N5Z5 321 aa16.23■□□□□ 0.19
DDR1-244ENST00000482873 UBL4BQ8N7F7 174 aa16.23■□□□□ 0.19
DDR1-244ENST00000482873 ANKLE1Q8NAG6 615 aa16.23■□□□□ 0.19
DDR1-244ENST00000482873 CPA5Q8WXQ8 436 aa16.23■□□□□ 0.19
DDR1-244ENST00000482873 FAM210AQ96ND0 272 aa16.23■□□□□ 0.19
DDR1-244ENST00000482873 RXFP1Q9HBX9 757 aa16.23■□□□□ 0.19
DDR1-244ENST00000482873 AAASQ9NRG9 546 aa16.23■□□□□ 0.19
DDR1-244ENST00000482873 PRKAG3Q9UGI9 489 aa16.23■□□□□ 0.19
DDR1-244ENST00000482873 NOCTQ9UK39 431 aaKnown RBP16.23■□□□□ 0.19
DDR1-244ENST00000482873 ARL2BPQ9Y2Y0 163 aa16.23■□□□□ 0.19
DDR1-244ENST00000482873 RGS20O76081 388 aa16.22■□□□□ 0.19
DDR1-244ENST00000482873 CYP11B1P15538 503 aa16.22■□□□□ 0.19
DDR1-244ENST00000482873 HSPA6P17066 643 aa16.22■□□□□ 0.19
DDR1-244ENST00000482873 MUTP22033 750 aa16.22■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 68.5 ms