RNA–Protein interactions for RNA: ENST00000482791.1

SNX27-205, Transcript of sorting nexin family member 27, humanhuman

TSL 3

Gene SNX27, Length 491 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27-205ENST00000482791 TMEM240Q5SV17 173 aa4.37□□□□□ -1.71
SNX27-205ENST00000482791 DACT2Q5SW24 774 aa4.37□□□□□ -1.71
SNX27-205ENST00000482791 PPP4R3AQ6IN85 833 aa4.37□□□□□ -1.71
SNX27-205ENST00000482791 LDLRAD3Q86YD5 345 aa4.37□□□□□ -1.71
SNX27-205ENST00000482791 SYT12Q8IV01 421 aa4.37□□□□□ -1.71
SNX27-205ENST00000482791 OR2I1PQ8NGU4 316 aa4.37□□□□□ -1.71
SNX27-205ENST00000482791 SLC35B2Q8TB61 432 aa4.37□□□□□ -1.71
SNX27-205ENST00000482791 CPT1CQ8TCG5 803 aa4.37□□□□□ -1.71
SNX27-205ENST00000482791 NRG4Q8WWG1 115 aa4.37□□□□□ -1.71
SNX27-205ENST00000482791 TIFAQ96CG3 184 aa4.37□□□□□ -1.71
SNX27-205ENST00000482791 MYEOVQ96EZ4 313 aa4.37□□□□□ -1.71
SNX27-205ENST00000482791 SLC2A13Q96QE2 648 aa4.37□□□□□ -1.71
SNX27-205ENST00000482791 CAMKK2Q96RR4 588 aa4.37□□□□□ -1.71
SNX27-205ENST00000482791 AGAP2Q99490 1192 aa4.37□□□□□ -1.71
SNX27-205ENST00000482791 PRRX2Q99811 253 aa4.37□□□□□ -1.71
SNX27-205ENST00000482791 MRI1Q9BV20 369 aa4.37□□□□□ -1.71
SNX27-205ENST00000482791 POGKQ9P215 609 aa4.37□□□□□ -1.71
SNX27-205ENST00000482791 AJAP1Q9UKB5 411 aaPredicted RBP4.37□□□□□ -1.71
SNX27-205ENST00000482791 PCDHGA9Q9Y5G4 932 aaKnown RBP4.37□□□□□ -1.71
SNX27-205ENST00000482791 PCDHGA8Q9Y5G5 932 aa4.37□□□□□ -1.71
SNX27-205ENST00000482791 PCDHGA7Q9Y5G6 932 aa4.37□□□□□ -1.71
SNX27-205ENST00000482791 PCDHGA6Q9Y5G7 932 aa4.37□□□□□ -1.71
SNX27-205ENST00000482791 PCDHGA3Q9Y5H0 932 aa4.37□□□□□ -1.71
SNX27-205ENST00000482791 HS3ST4Q9Y661 456 aa4.37□□□□□ -1.71
SNX27-205ENST00000482791 A0A087X1B8 175 aa4.36□□□□□ -1.71
SNX27-205ENST00000482791 GOLGA6CA6NDK9 693 aa4.36□□□□□ -1.71
SNX27-205ENST00000482791 GOLGA6BA6NDN3 693 aa4.36□□□□□ -1.71
SNX27-205ENST00000482791 TMEM200CA6NKL6 621 aa4.36□□□□□ -1.71
SNX27-205ENST00000482791 DRGXA6NNA5 263 aa4.36□□□□□ -1.71
SNX27-205ENST00000482791 MARCH11A6NNE9 402 aa4.36□□□□□ -1.71
SNX27-205ENST00000482791 LEFTY2O00292 366 aa4.36□□□□□ -1.71
SNX27-205ENST00000482791 FAM20BO75063 409 aa4.36□□□□□ -1.71
SNX27-205ENST00000482791 EIF3JO75822 258 aaKnown RBP4.36□□□□□ -1.71
SNX27-205ENST00000482791 AMY1AP04745 511 aa4.36□□□□□ -1.71
SNX27-205ENST00000482791 CT47B1P0C2W7 299 aaPredicted RBP4.36□□□□□ -1.71
SNX27-205ENST00000482791 GOLGA6DP0CG33 693 aa4.36□□□□□ -1.71
SNX27-205ENST00000482791 RAP2AP10114 183 aa4.36□□□□□ -1.71
SNX27-205ENST00000482791 LAG3P18627 525 aa4.36□□□□□ -1.71
SNX27-205ENST00000482791 RECQLP46063 649 aaPredicted RBP4.36□□□□□ -1.71
SNX27-205ENST00000482791 ALDH1A3P47895 512 aa4.36□□□□□ -1.71
SNX27-205ENST00000482791 ATXN1P54253 815 aaKnown RBP4.36□□□□□ -1.71
SNX27-205ENST00000482791 NHLH2Q02577 135 aa4.36□□□□□ -1.71
SNX27-205ENST00000482791 ACAP2Q15057 778 aa4.36□□□□□ -1.71
SNX27-205ENST00000482791 FAM102AQ5T9C2 384 aaPredicted RBP4.36□□□□□ -1.71
SNX27-205ENST00000482791 AGAP9Q5VTM2 703 aa4.36□□□□□ -1.71
SNX27-205ENST00000482791 EFCAB2Q5VUJ9 269 aa4.36□□□□□ -1.71
SNX27-205ENST00000482791 METRNLQ641Q3 311 aa4.36□□□□□ -1.71
SNX27-205ENST00000482791 MRGPREQ86SM8 312 aa4.36□□□□□ -1.71
SNX27-205ENST00000482791 PNMA8AQ86V59 439 aaPredicted RBP4.36□□□□□ -1.71
SNX27-205ENST00000482791 RHOT2Q8IXI1 618 aa4.36□□□□□ -1.71
SNX27-205ENST00000482791 ULK2Q8IYT8 1036 aa4.36□□□□□ -1.71
SNX27-205ENST00000482791 CPA6Q8N4T0 437 aa4.36□□□□□ -1.71
SNX27-205ENST00000482791 REXO4Q9GZR2 422 aaKnown RBP4.36□□□□□ -1.71
SNX27-205ENST00000482791 NRDE2Q9H7Z3 1164 aa4.36□□□□□ -1.71
SNX27-205ENST00000482791 MMRN2Q9H8L6 949 aa4.36□□□□□ -1.71
SNX27-205ENST00000482791 OBP2AQ9NY56 170 aa4.36□□□□□ -1.71
SNX27-205ENST00000482791 GOLGA6AQ9NYA3 693 aa4.36□□□□□ -1.71
SNX27-205ENST00000482791 TRPM5Q9NZQ8 1165 aa4.36□□□□□ -1.71
SNX27-205ENST00000482791 NIPSNAP3AQ9UFN0 247 aaPredicted RBP4.36□□□□□ -1.71
SNX27-205ENST00000482791 IPPQ9Y573 584 aa4.36□□□□□ -1.71
SNX27-205ENST00000482791 HTRA2O43464 458 aaPredicted RBP4.35□□□□□ -1.71
SNX27-205ENST00000482791 RPS6KA4O75676 772 aa4.35□□□□□ -1.71
SNX27-205ENST00000482791 LDHAP00338 332 aaKnown RBP4.35□□□□□ -1.71
SNX27-205ENST00000482791 POMCP01189 267 aa4.35□□□□□ -1.71
SNX27-205ENST00000482791 HLA-DOAP06340 250 aa4.35□□□□□ -1.71
SNX27-205ENST00000482791 DDCP20711 480 aa4.35□□□□□ -1.71
SNX27-205ENST00000482791 NR4A1P22736 598 aa4.35□□□□□ -1.71
SNX27-205ENST00000482791 PCSK1P29120 753 aa4.35□□□□□ -1.71
SNX27-205ENST00000482791 CTXN1P60606 82 aa4.35□□□□□ -1.71
SNX27-205ENST00000482791 HDAC1Q13547 482 aaPredicted RBP4.35□□□□□ -1.71
SNX27-205ENST00000482791 HLTFQ14527 1009 aaKnown RBP eCLIP4.35□□□□□ -1.71
SNX27-205ENST00000482791 RAB39AQ14964 217 aa4.35□□□□□ -1.71
SNX27-205ENST00000482791 LY6G5CQ5SRR4 150 aa4.35□□□□□ -1.71
SNX27-205ENST00000482791 CXorf57Q6NSI4 855 aaKnown RBP4.35□□□□□ -1.71
SNX27-205ENST00000482791 GLCCI1Q86VQ1 547 aa4.35□□□□□ -1.71
SNX27-205ENST00000482791 DGKHQ86XP1 1220 aa4.35□□□□□ -1.71
SNX27-205ENST00000482791 RNF169Q8NCN4 708 aa4.35□□□□□ -1.71
SNX27-205ENST00000482791 NLGN4YQ8NFZ3 816 aaPredicted RBP4.35□□□□□ -1.71
SNX27-205ENST00000482791 COA7Q96BR5 231 aa4.35□□□□□ -1.71
SNX27-205ENST00000482791 CLIP3Q96DZ5 547 aa4.35□□□□□ -1.71
SNX27-205ENST00000482791 LRGUKQ96M69 825 aa4.35□□□□□ -1.71
SNX27-205ENST00000482791 TCF7L1Q9HCS4 588 aa4.35□□□□□ -1.71
SNX27-205ENST00000482791 ANLNQ9NQW6 1124 aa4.35□□□□□ -1.71
SNX27-205ENST00000482791 SLC2A4RGQ9NR83 387 aa4.35□□□□□ -1.71
SNX27-205ENST00000482791 TDP1Q9NUW8 608 aa4.35□□□□□ -1.71
SNX27-205ENST00000482791 CALCOCO1Q9P1Z2 691 aa4.35□□□□□ -1.71
SNX27-205ENST00000482791 DKK2Q9UBU2 259 aa4.35□□□□□ -1.71
SNX27-205ENST00000482791 SLC23A1Q9UHI7 598 aa4.35□□□□□ -1.71
SNX27-205ENST00000482791 INTUQ9ULD6 942 aa4.35□□□□□ -1.71
SNX27-205ENST00000482791 REXO2Q9Y3B8 237 aaKnown RBP4.35□□□□□ -1.71
SNX27-205ENST00000482791 CFAP20Q9Y6A4 193 aaKnown RBP4.35□□□□□ -1.71
SNX27-205ENST00000482791 COMMD10Q9Y6G5 202 aa4.35□□□□□ -1.71
SNX27-205ENST00000482791 PNPLA7Q6ZV29 1317 aa4.35□□□□□ -1.71
SNX27-205ENST00000482791 MYBBP1AQ9BQG0 1328 aaKnown RBP4.35□□□□□ -1.71
SNX27-205ENST00000482791 WNT10BO00744 389 aa4.34□□□□□ -1.71
SNX27-205ENST00000482791 VCAM1P19320 739 aa4.34□□□□□ -1.71
SNX27-205ENST00000482791 FPR1P21462 350 aa4.34□□□□□ -1.71
SNX27-205ENST00000482791 GCSHP23434 173 aa4.34□□□□□ -1.71
SNX27-205ENST00000482791 CHN2P52757 468 aa4.34□□□□□ -1.71
SNX27-205ENST00000482791 BLOC1S1P78537 153 aa4.34□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 63.6 ms