RNA–Protein interactions for RNA: ENST00000482596.1

CHD6-209, Transcript of chromodomain helicase DNA binding protein 6, humanhuman

TSL 1 (best)

Gene CHD6, Length 599 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD6-209ENST00000482596 NAF1Q96HR8 494 aaKnown RBP7.43□□□□□ -1.22
CHD6-209ENST00000482596 MBOAT7Q96N66 472 aa7.43□□□□□ -1.22
CHD6-209ENST00000482596 KIF2CQ99661 725 aa7.43□□□□□ -1.22
CHD6-209ENST00000482596 PUS7LQ9H0K6 701 aaKnown RBP7.43□□□□□ -1.22
CHD6-209ENST00000482596 SENP2Q9HC62 589 aa7.43□□□□□ -1.22
CHD6-209ENST00000482596 CAPN10Q9HC96 672 aa7.43□□□□□ -1.22
CHD6-209ENST00000482596 PCOLCE2Q9UKZ9 415 aa7.43□□□□□ -1.22
CHD6-209ENST00000482596 KCNH3Q9ULD8 1083 aa7.43□□□□□ -1.22
CHD6-209ENST00000482596 ABCB11O95342 1321 aa7.43□□□□□ -1.22
CHD6-209ENST00000482596 MED13Q9UHV7 2174 aa7.43□□□□□ -1.22
CHD6-209ENST00000482596 SVILO95425 2214 aa7.43□□□□□ -1.22
CHD6-209ENST00000482596 KIAA1549LQ6ZVL6 1849 aa7.43□□□□□ -1.22
CHD6-209ENST00000482596 SPATA31C2B4DYI2 1134 aa7.42□□□□□ -1.22
CHD6-209ENST00000482596 DIAPH2O60879 1101 aa7.42□□□□□ -1.22
CHD6-209ENST00000482596 ATP9AO75110 1047 aa7.42□□□□□ -1.22
CHD6-209ENST00000482596 EFEMP2O95967 443 aa7.42□□□□□ -1.22
CHD6-209ENST00000482596 HNRNPA1P09651 372 aaKnown RBP eCLIP7.42□□□□□ -1.22
CHD6-209ENST00000482596 ZSCAN20P17040 1043 aaPredicted RBP7.42□□□□□ -1.22
CHD6-209ENST00000482596 ITPKAP23677 461 aa7.42□□□□□ -1.22
CHD6-209ENST00000482596 CCND2P30279 289 aa7.42□□□□□ -1.22
CHD6-209ENST00000482596 MFAP1P55081 439 aaKnown RBP7.42□□□□□ -1.22
CHD6-209ENST00000482596 MLLT6P55198 1093 aaPredicted RBP7.42□□□□□ -1.22
CHD6-209ENST00000482596 WDR4P57081 412 aaKnown RBP7.42□□□□□ -1.22
CHD6-209ENST00000482596 MRPS9P82933 396 aaKnown RBP7.42□□□□□ -1.22
CHD6-209ENST00000482596 PTK2Q05397 1052 aa7.42□□□□□ -1.22
CHD6-209ENST00000482596 GFPT1Q06210 699 aaPredicted RBP7.42□□□□□ -1.22
CHD6-209ENST00000482596 MYO1EQ12965 1108 aa7.42□□□□□ -1.22
CHD6-209ENST00000482596 SMAD1Q15797 465 aaKnown RBP7.42□□□□□ -1.22
CHD6-209ENST00000482596 UVSSAQ2YD98 709 aa7.42□□□□□ -1.22
CHD6-209ENST00000482596 NOMO2Q5JPE7 1267 aa7.42□□□□□ -1.22
CHD6-209ENST00000482596 FAM43BQ6ZT52 329 aaPredicted RBP7.42□□□□□ -1.22
CHD6-209ENST00000482596 VASH1Q7L8A9 365 aaPredicted RBP7.42□□□□□ -1.22
CHD6-209ENST00000482596 TICAM1Q8IUC6 712 aa7.42□□□□□ -1.22
CHD6-209ENST00000482596 FAM26EQ8N5C1 309 aa7.42□□□□□ -1.22
CHD6-209ENST00000482596 FRMD1Q8N878 549 aa7.42□□□□□ -1.22
CHD6-209ENST00000482596 RSPRY1Q96DX4 576 aa7.42□□□□□ -1.22
CHD6-209ENST00000482596 TCEAL4Q96EI5 215 aa7.42□□□□□ -1.22
CHD6-209ENST00000482596 MSANTD3Q96H12 275 aa7.42□□□□□ -1.22
CHD6-209ENST00000482596 ZSWIM3Q96MP5 696 aa7.42□□□□□ -1.22
CHD6-209ENST00000482596 ASB16Q96NS5 453 aa7.42□□□□□ -1.22
CHD6-209ENST00000482596 PCYT2Q99447 389 aa7.42□□□□□ -1.22
CHD6-209ENST00000482596 C8orf33Q9H7E9 229 aaPredicted RBP7.42□□□□□ -1.22
CHD6-209ENST00000482596 PRDM16Q9HAZ2 1276 aa7.42□□□□□ -1.22
CHD6-209ENST00000482596 EPB41L4AQ9HCS5 686 aaPredicted RBP7.42□□□□□ -1.22
CHD6-209ENST00000482596 SMC4Q9NTJ3 1288 aa7.42□□□□□ -1.22
CHD6-209ENST00000482596 RTEL1Q9NZ71 1219 aa7.42□□□□□ -1.22
CHD6-209ENST00000482596 EBF1Q9UH73 591 aa7.42□□□□□ -1.22
CHD6-209ENST00000482596 PNMA2Q9UL42 364 aa7.42□□□□□ -1.22
CHD6-209ENST00000482596 SLC6A14Q9UN76 642 aa7.42□□□□□ -1.22
CHD6-209ENST00000482596 SSX2IPQ9Y2D8 614 aa7.42□□□□□ -1.22
CHD6-209ENST00000482596 FAN1Q9Y2M0 1017 aa7.42□□□□□ -1.22
CHD6-209ENST00000482596 PRG3Q9Y2Y8 225 aaPredicted RBP7.42□□□□□ -1.22
CHD6-209ENST00000482596 AK5Q9Y6K8 562 aa7.42□□□□□ -1.22
CHD6-209ENST00000482596 ZMYM6O95789 1325 aa7.42□□□□□ -1.22
CHD6-209ENST00000482596 ANKHD1Q8IWZ3 2542 aaKnown RBP7.41□□□□□ -1.22
CHD6-209ENST00000482596 NBEAL1Q6ZS30 2694 aa7.41□□□□□ -1.22
CHD6-209ENST00000482596 E9PAM4 449 aa7.41□□□□□ -1.22
CHD6-209ENST00000482596 TNFRSF10BO14763 440 aa7.41□□□□□ -1.22
CHD6-209ENST00000482596 XYLBO75191 536 aa7.41□□□□□ -1.22
CHD6-209ENST00000482596 GPR32O75388 356 aa7.41□□□□□ -1.22
CHD6-209ENST00000482596 OFD1O75665 1012 aa7.41□□□□□ -1.22
CHD6-209ENST00000482596 APBB3O95704 486 aa7.41□□□□□ -1.22
CHD6-209ENST00000482596 C1RP00736 705 aa7.41□□□□□ -1.22
CHD6-209ENST00000482596 RHOP08100 348 aa7.41□□□□□ -1.22
CHD6-209ENST00000482596 FGFR4P22455 802 aa7.41□□□□□ -1.22
CHD6-209ENST00000482596 HOXA13P31271 388 aaPredicted RBP7.41□□□□□ -1.22
CHD6-209ENST00000482596 HSD17B4P51659 736 aa7.41□□□□□ -1.22
CHD6-209ENST00000482596 CRYBB1P53674 252 aaPredicted RBP7.41□□□□□ -1.22
CHD6-209ENST00000482596 TMPRSS3P57727 454 aa7.41□□□□□ -1.22
CHD6-209ENST00000482596 PDE4CQ08493 712 aa7.41□□□□□ -1.22
CHD6-209ENST00000482596 OS9Q13438 667 aaPredicted RBP7.41□□□□□ -1.22
CHD6-209ENST00000482596 IGFBP7Q16270 282 aa7.41□□□□□ -1.22
CHD6-209ENST00000482596 CCDC157Q569K6 752 aa7.41□□□□□ -1.22
CHD6-209ENST00000482596 STOX1Q6ZVD7 989 aa7.41□□□□□ -1.22
CHD6-209ENST00000482596 ZC3H18Q86VM9 953 aaKnown RBP7.41□□□□□ -1.22
CHD6-209ENST00000482596 RALGPS2Q86X27 583 aaPredicted RBP7.41□□□□□ -1.22
CHD6-209ENST00000482596 MCF2L2Q86YR7 1114 aa7.41□□□□□ -1.22
CHD6-209ENST00000482596 SLC7A14Q8TBB6 771 aa7.41□□□□□ -1.22
CHD6-209ENST00000482596 FAM200AQ8TCP9 573 aa7.41□□□□□ -1.22
CHD6-209ENST00000482596 FGF11Q92914 225 aa7.41□□□□□ -1.22
CHD6-209ENST00000482596 FNBP1Q96RU3 617 aa7.41□□□□□ -1.22
CHD6-209ENST00000482596 LPIN3Q9BQK8 851 aa7.41□□□□□ -1.22
CHD6-209ENST00000482596 PI4K2AQ9BTU6 479 aa7.41□□□□□ -1.22
CHD6-209ENST00000482596 APOL6Q9BWW8 343 aa7.41□□□□□ -1.22
CHD6-209ENST00000482596 SNTG2Q9NY99 539 aa7.41□□□□□ -1.22
CHD6-209ENST00000482596 GTSE1Q9NYZ3 720 aa7.41□□□□□ -1.22
CHD6-209ENST00000482596 STK39Q9UEW8 545 aa7.41□□□□□ -1.22
CHD6-209ENST00000482596 PILRBQ9UKJ0 227 aa7.41□□□□□ -1.22
CHD6-209ENST00000482596 MAP4K5Q9Y4K4 846 aa7.41□□□□□ -1.22
CHD6-209ENST00000482596 CSMD2Q7Z408 3487 aa7.41□□□□□ -1.22
CHD6-209ENST00000482596 CARNS1A5YM72 827 aa7.4□□□□□ -1.22
CHD6-209ENST00000482596 VTNP04004 478 aa7.4□□□□□ -1.22
CHD6-209ENST00000482596 ALDH2P05091 517 aa7.4□□□□□ -1.22
CHD6-209ENST00000482596 SERPINF2P08697 491 aa7.4□□□□□ -1.22
CHD6-209ENST00000482596 SKIP12755 728 aa7.4□□□□□ -1.22
CHD6-209ENST00000482596 TIMP2P16035 220 aa7.4□□□□□ -1.22
CHD6-209ENST00000482596 KLRC1P26715 233 aa7.4□□□□□ -1.22
CHD6-209ENST00000482596 COL8A1P27658 744 aa7.4□□□□□ -1.22
CHD6-209ENST00000482596 HOXA9P31269 272 aa7.4□□□□□ -1.22
CHD6-209ENST00000482596 SLC14A1Q13336 389 aa7.4□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms