RNA–Protein interactions for RNA: ENST00000481690.2

GPCPD1-206, Transcript of glycerophosphocholine phosphodiesterase 1, humanhuman

TSL 3

Gene GPCPD1, Length 819 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPCPD1-206ENST00000481690 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP24.24■■□□□ 1.47
GPCPD1-206ENST00000481690 TUBGCP4Q9UGJ1 667 aa24.24■■□□□ 1.47
GPCPD1-206ENST00000481690 BACE2Q9Y5Z0 518 aa24.24■■□□□ 1.47
GPCPD1-206ENST00000481690 NARSO43776 548 aaKnown RBP24.23■■□□□ 1.47
GPCPD1-206ENST00000481690 SYT1P21579 422 aa24.23■■□□□ 1.47
GPCPD1-206ENST00000481690 HOXA9P31269 272 aa24.23■■□□□ 1.47
GPCPD1-206ENST00000481690 RPL9P32969 192 aaKnown RBP24.23■■□□□ 1.47
GPCPD1-206ENST00000481690 MCM4P33991 863 aa24.23■■□□□ 1.47
GPCPD1-206ENST00000481690 SPAG1Q07617 926 aa24.23■■□□□ 1.47
GPCPD1-206ENST00000481690 TCF15Q12870 199 aa24.23■■□□□ 1.47
GPCPD1-206ENST00000481690 VARS2Q5ST30 1063 aaKnown RBP24.23■■□□□ 1.47
GPCPD1-206ENST00000481690 FAM173BQ6P4H8 233 aa24.23■■□□□ 1.47
GPCPD1-206ENST00000481690 FLCNQ8NFG4 579 aa24.23■■□□□ 1.47
GPCPD1-206ENST00000481690 LARP4BQ92615 738 aaKnown RBP24.23■■□□□ 1.47
GPCPD1-206ENST00000481690 CCSER1Q9C0I3 900 aa24.23■■□□□ 1.47
GPCPD1-206ENST00000481690 HAPLN2Q9GZV7 340 aa24.23■■□□□ 1.47
GPCPD1-206ENST00000481690 TBX20Q9UMR3 447 aa24.23■■□□□ 1.47
GPCPD1-206ENST00000481690 MYH15Q9Y2K3 1946 aa24.23■■□□□ 1.47
GPCPD1-206ENST00000481690 TRAK2O60296 914 aa24.22■■□□□ 1.47
GPCPD1-206ENST00000481690 LAMP2P13473 410 aa24.22■■□□□ 1.47
GPCPD1-206ENST00000481690 TNFSF9P41273 254 aa24.22■■□□□ 1.47
GPCPD1-206ENST00000481690 MRE11P49959 708 aa24.22■■□□□ 1.47
GPCPD1-206ENST00000481690 ZNF131P52739 623 aa24.22■■□□□ 1.47
GPCPD1-206ENST00000481690 ARPP19P56211 112 aa24.22■■□□□ 1.47
GPCPD1-206ENST00000481690 CEBPZQ03701 1054 aaKnown RBP24.22■■□□□ 1.47
GPCPD1-206ENST00000481690 RESTQ13127 1097 aa24.22■■□□□ 1.47
GPCPD1-206ENST00000481690 PTPAQ15257 358 aa24.22■■□□□ 1.47
GPCPD1-206ENST00000481690 TMEM105Q8N8V8 129 aa24.22■■□□□ 1.47
GPCPD1-206ENST00000481690 ST13P5Q8NFI4 369 aaPredicted RBP24.22■■□□□ 1.47
GPCPD1-206ENST00000481690 KIF12Q96FN5 646 aa24.22■■□□□ 1.47
GPCPD1-206ENST00000481690 EPSTI1Q96J88 318 aa24.22■■□□□ 1.47
GPCPD1-206ENST00000481690 BACH2Q9BYV9 841 aa24.22■■□□□ 1.47
GPCPD1-206ENST00000481690 WDFY4Q6ZS81 3184 aa24.22■■□□□ 1.47
GPCPD1-206ENST00000481690 CFHP08603 1231 aa24.21■■□□□ 1.47
GPCPD1-206ENST00000481690 CLTAP09496 248 aa24.21■■□□□ 1.47
GPCPD1-206ENST00000481690 ROR1Q01973 937 aa24.21■■□□□ 1.47
GPCPD1-206ENST00000481690 PPP2R3AQ06190 1150 aa24.21■■□□□ 1.47
GPCPD1-206ENST00000481690 ASTLQ6HA08 431 aaPredicted RBP24.21■■□□□ 1.47
GPCPD1-206ENST00000481690 USP49Q70CQ1 688 aa24.21■■□□□ 1.47
GPCPD1-206ENST00000481690 CCDC39Q9UFE4 941 aa24.21■■□□□ 1.47
GPCPD1-206ENST00000481690 NOTCH4Q99466 2003 aa24.2■■□□□ 1.47
GPCPD1-206ENST00000481690 SYN3O14994 580 aa24.2■■□□□ 1.46
GPCPD1-206ENST00000481690 NMT1P30419 496 aaKnown RBP24.2■■□□□ 1.46
GPCPD1-206ENST00000481690 UVSSAQ2YD98 709 aa24.2■■□□□ 1.46
GPCPD1-206ENST00000481690 SIX5Q8N196 739 aa24.2■■□□□ 1.46
GPCPD1-206ENST00000481690 TMEM130Q8N3G9 435 aa24.2■■□□□ 1.46
GPCPD1-206ENST00000481690 SLC44A3Q8N4M1 653 aa24.2■■□□□ 1.46
GPCPD1-206ENST00000481690 NXPE3Q969Y0 559 aa24.2■■□□□ 1.46
GPCPD1-206ENST00000481690 PHOX2BQ99453 314 aa24.2■■□□□ 1.46
GPCPD1-206ENST00000481690 PLEKHA5Q9HAU0 1116 aa24.2■■□□□ 1.46
GPCPD1-206ENST00000481690 HCFC1R1Q9NWW0 138 aa24.2■■□□□ 1.46
GPCPD1-206ENST00000481690 FBXO2Q9UK22 296 aaPredicted RBP24.2■■□□□ 1.46
GPCPD1-206ENST00000481690 ANK1P16157 1881 aa24.19■■□□□ 1.46
GPCPD1-206ENST00000481690 H7C4K7 107 aa24.19■■□□□ 1.46
GPCPD1-206ENST00000481690 SCP2P22307 547 aa24.19■■□□□ 1.46
GPCPD1-206ENST00000481690 ELF1P32519 619 aa24.19■■□□□ 1.46
GPCPD1-206ENST00000481690 DDIT3P35638 169 aa24.19■■□□□ 1.46
GPCPD1-206ENST00000481690 TXLNAP40222 546 aa24.19■■□□□ 1.46
GPCPD1-206ENST00000481690 CTXN3Q4LDR2 81 aa24.19■■□□□ 1.46
GPCPD1-206ENST00000481690 ZBTB41Q5SVQ8 909 aa24.19■■□□□ 1.46
GPCPD1-206ENST00000481690 SLC8B1Q6J4K2 584 aa24.19■■□□□ 1.46
GPCPD1-206ENST00000481690 KRI1Q8N9T8 703 aaKnown RBP24.19■■□□□ 1.46
GPCPD1-206ENST00000481690 KCNN1Q92952 543 aa24.19■■□□□ 1.46
GPCPD1-206ENST00000481690 INTS4Q96HW7 963 aaKnown RBP24.19■■□□□ 1.46
GPCPD1-206ENST00000481690 SUSD3Q96L08 255 aa24.19■■□□□ 1.46
GPCPD1-206ENST00000481690 CLIC6Q96NY7 704 aa24.19■■□□□ 1.46
GPCPD1-206ENST00000481690 MSTO1Q9BUK6 570 aa24.19■■□□□ 1.46
GPCPD1-206ENST00000481690 RPF1Q9H9Y2 349 aaKnown RBP24.19■■□□□ 1.46
GPCPD1-206ENST00000481690 FAM86C1Q9NVL1 165 aa24.19■■□□□ 1.46
GPCPD1-206ENST00000481690 CDH7Q9ULB5 785 aa24.19■■□□□ 1.46
GPCPD1-206ENST00000481690 NUMBLQ9Y6R0 609 aa24.19■■□□□ 1.46
GPCPD1-206ENST00000481690 PIEZO1Q92508 2521 aa24.18■■□□□ 1.46
GPCPD1-206ENST00000481690 TTC26A0AVF1 554 aa24.18■■□□□ 1.46
GPCPD1-206ENST00000481690 WDR27A2RRH5 827 aa24.18■■□□□ 1.46
GPCPD1-206ENST00000481690 K7ELQ4 463 aaPredicted RBP24.18■■□□□ 1.46
GPCPD1-206ENST00000481690 OGTO15294 1046 aa24.18■■□□□ 1.46
GPCPD1-206ENST00000481690 PIGRP01833 764 aa24.18■■□□□ 1.46
GPCPD1-206ENST00000481690 RFX1P22670 979 aa24.18■■□□□ 1.46
GPCPD1-206ENST00000481690 HTR4Q13639 388 aa24.18■■□□□ 1.46
GPCPD1-206ENST00000481690 KYAT1Q16773 422 aa24.18■■□□□ 1.46
GPCPD1-206ENST00000481690 PABPC1LQ4VXU2 614 aaKnown RBP24.18■■□□□ 1.46
GPCPD1-206ENST00000481690 CWF19L1Q69YN2 538 aaKnown RBP24.18■■□□□ 1.46
GPCPD1-206ENST00000481690 DYMQ7RTS9 669 aa24.18■■□□□ 1.46
GPCPD1-206ENST00000481690 ZNF461Q8TAF7 563 aa24.18■■□□□ 1.46
GPCPD1-206ENST00000481690 DDX12PQ92771 950 aa24.18■■□□□ 1.46
GPCPD1-206ENST00000481690 FAM212AQ96EL1 285 aa24.18■■□□□ 1.46
GPCPD1-206ENST00000481690 STK17AQ9UEE5 414 aa24.18■■□□□ 1.46
GPCPD1-206ENST00000481690 FBXL5Q9UKA1 691 aa24.18■■□□□ 1.46
GPCPD1-206ENST00000481690 UBQLN1Q9UMX0 589 aaKnown RBP24.18■■□□□ 1.46
GPCPD1-206ENST00000481690 SRPRBQ9Y5M8 271 aaKnown RBP24.18■■□□□ 1.46
GPCPD1-206ENST00000481690 ZFP37Q9Y6Q3 630 aaPredicted RBP24.18■■□□□ 1.46
GPCPD1-206ENST00000481690 LACTBL1A8MY62 500 aa24.17■■□□□ 1.46
GPCPD1-206ENST00000481690 PRRG1O14668 218 aa24.17■■□□□ 1.46
GPCPD1-206ENST00000481690 GALR2O43603 387 aaPredicted RBP24.17■■□□□ 1.46
GPCPD1-206ENST00000481690 LRG1P02750 347 aa24.17■■□□□ 1.46
GPCPD1-206ENST00000481690 SRFP11831 508 aa24.17■■□□□ 1.46
GPCPD1-206ENST00000481690 NUBP1P53384 320 aa24.17■■□□□ 1.46
GPCPD1-206ENST00000481690 ZC2HC1CQ53FD0 456 aaPredicted RBP24.17■■□□□ 1.46
GPCPD1-206ENST00000481690 RRAGBQ5VZM2 374 aa24.17■■□□□ 1.46
GPCPD1-206ENST00000481690 ZNF280DQ6N043 979 aa24.17■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms