RNA–Protein interactions for RNA: ENST00000481522.1

COPA-204, Transcript of coatomer protein complex subunit alpha, humanhuman

TSL 2

Gene COPA, Length 578 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPA-204ENST00000481522 EIF2B4Q9UI10 523 aaKnown RBP4.83□□□□□ -1.64
COPA-204ENST00000481522 SCOCQ9UIL1 159 aa4.83□□□□□ -1.64
COPA-204ENST00000481522 PCDHGA2Q9Y5H1 932 aa4.83□□□□□ -1.64
COPA-204ENST00000481522 FZD9O00144 591 aa4.82□□□□□ -1.64
COPA-204ENST00000481522 FAM20BO75063 409 aa4.82□□□□□ -1.64
COPA-204ENST00000481522 ALDH1L1O75891 902 aa4.82□□□□□ -1.64
COPA-204ENST00000481522 SNUPNO95149 360 aaKnown RBP4.82□□□□□ -1.64
COPA-204ENST00000481522 MGAT1P26572 445 aa4.82□□□□□ -1.64
COPA-204ENST00000481522 MCAMP43121 646 aa4.82□□□□□ -1.64
COPA-204ENST00000481522 NEK2P51955 445 aa4.82□□□□□ -1.64
COPA-204ENST00000481522 MGAT2Q10469 447 aa4.82□□□□□ -1.64
COPA-204ENST00000481522 TOB2Q14106 344 aaPredicted RBP4.82□□□□□ -1.64
COPA-204ENST00000481522 PCBP2Q15366 365 aaKnown RBP eCLIP4.82□□□□□ -1.64
COPA-204ENST00000481522 RABL3Q5HYI8 236 aa4.82□□□□□ -1.64
COPA-204ENST00000481522 MEX3CQ5U5Q3 659 aaKnown RBP4.82□□□□□ -1.64
COPA-204ENST00000481522 EFCAB2Q5VUJ9 269 aa4.82□□□□□ -1.64
COPA-204ENST00000481522 TRMT2AQ8IZ69 625 aaKnown RBP4.82□□□□□ -1.64
COPA-204ENST00000481522 PQLC1Q8N2U9 271 aa4.82□□□□□ -1.64
COPA-204ENST00000481522 JADE3Q92613 823 aa4.82□□□□□ -1.64
COPA-204ENST00000481522 TFAP2CQ92754 450 aa4.82□□□□□ -1.64
COPA-204ENST00000481522 SLC2A13Q96QE2 648 aa4.82□□□□□ -1.64
COPA-204ENST00000481522 TMEM140Q9NV12 185 aa4.82□□□□□ -1.64
COPA-204ENST00000481522 MOCS1Q9NZB8 636 aa4.82□□□□□ -1.64
COPA-204ENST00000481522 SAP30BPQ9UHR5 308 aaKnown RBP4.82□□□□□ -1.64
COPA-204ENST00000481522 SORCS3Q9UPU3 1222 aa4.82□□□□□ -1.64
COPA-204ENST00000481522 XDHP47989 1333 aa4.81□□□□□ -1.64
COPA-204ENST00000481522 TRIM24O15164 1050 aa4.81□□□□□ -1.64
COPA-204ENST00000481522 PPM1GO15355 546 aaPredicted RBP4.81□□□□□ -1.64
COPA-204ENST00000481522 PCDHGA12O60330 932 aa4.81□□□□□ -1.64
COPA-204ENST00000481522 NDUFS2O75306 463 aa4.81□□□□□ -1.64
COPA-204ENST00000481522 SCAF4O95104 1147 aaKnown RBP4.81□□□□□ -1.64
COPA-204ENST00000481522 RAP2AP10114 183 aa4.81□□□□□ -1.64
COPA-204ENST00000481522 IL2RBP14784 551 aa4.81□□□□□ -1.64
COPA-204ENST00000481522 RECQLP46063 649 aaPredicted RBP4.81□□□□□ -1.64
COPA-204ENST00000481522 SLC16A1P53985 500 aa4.81□□□□□ -1.64
COPA-204ENST00000481522 EPHA10Q5JZY3 1008 aa4.81□□□□□ -1.64
COPA-204ENST00000481522 EFCAB12Q6NXP0 572 aa4.81□□□□□ -1.64
COPA-204ENST00000481522 Q6ZVL8 140 aa4.81□□□□□ -1.64
COPA-204ENST00000481522 MIGA2Q7L4E1 593 aa4.81□□□□□ -1.64
COPA-204ENST00000481522 ZNF572Q7Z3I7 529 aaPredicted RBP4.81□□□□□ -1.64
COPA-204ENST00000481522 SYNE4Q8N205 404 aa4.81□□□□□ -1.64
COPA-204ENST00000481522 PPM1NQ8N819 430 aa4.81□□□□□ -1.64
COPA-204ENST00000481522 RNF169Q8NCN4 708 aa4.81□□□□□ -1.64
COPA-204ENST00000481522 REPS2Q8NFH8 660 aa4.81□□□□□ -1.64
COPA-204ENST00000481522 FBXO18Q8NFZ0 1043 aa4.81□□□□□ -1.64
COPA-204ENST00000481522 OR10H5Q8NGA6 315 aa4.81□□□□□ -1.64
COPA-204ENST00000481522 ZFP28Q8NHY6 868 aa4.81□□□□□ -1.64
COPA-204ENST00000481522 CPT1CQ8TCG5 803 aa4.81□□□□□ -1.64
COPA-204ENST00000481522 CEP95Q96GE4 821 aa4.81□□□□□ -1.64
COPA-204ENST00000481522 TEKT5Q96M29 485 aa4.81□□□□□ -1.64
COPA-204ENST00000481522 POGKQ9P215 609 aa4.81□□□□□ -1.64
COPA-204ENST00000481522 PCDHGA9Q9Y5G4 932 aaKnown RBP4.81□□□□□ -1.64
COPA-204ENST00000481522 PCDHGA8Q9Y5G5 932 aa4.81□□□□□ -1.64
COPA-204ENST00000481522 PCDHGA7Q9Y5G6 932 aa4.81□□□□□ -1.64
COPA-204ENST00000481522 PCDHGA6Q9Y5G7 932 aa4.81□□□□□ -1.64
COPA-204ENST00000481522 PCDHGA3Q9Y5H0 932 aa4.81□□□□□ -1.64
COPA-204ENST00000481522 CUL7Q14999 1698 aa4.8□□□□□ -1.64
COPA-204ENST00000481522 ADGBQ8N7X0 1667 aa4.8□□□□□ -1.64
COPA-204ENST00000481522 PJA2O43164 708 aa4.8□□□□□ -1.64
COPA-204ENST00000481522 TEX33O43247 280 aa4.8□□□□□ -1.64
COPA-204ENST00000481522 PPFIA4O75335 1185 aa4.8□□□□□ -1.64
COPA-204ENST00000481522 NUDT3O95989 172 aa4.8□□□□□ -1.64
COPA-204ENST00000481522 S100BP04271 92 aaPredicted RBP4.8□□□□□ -1.64
COPA-204ENST00000481522 SNRPA1P09661 255 aaKnown RBP4.8□□□□□ -1.64
COPA-204ENST00000481522 GSPT1P15170 499 aaKnown RBP4.8□□□□□ -1.64
COPA-204ENST00000481522 C5AR1P21730 350 aa4.8□□□□□ -1.64
COPA-204ENST00000481522 APOBEC3AP31941 199 aaPredicted RBP4.8□□□□□ -1.64
COPA-204ENST00000481522 PTGS2P35354 604 aa4.8□□□□□ -1.64
COPA-204ENST00000481522 SREBF1P36956 1147 aa4.8□□□□□ -1.64
COPA-204ENST00000481522 RBM6P78332 1123 aaKnown RBP4.8□□□□□ -1.64
COPA-204ENST00000481522 PPP3CAQ08209 521 aa4.8□□□□□ -1.64
COPA-204ENST00000481522 SP140Q13342 867 aa4.8□□□□□ -1.64
COPA-204ENST00000481522 TTF1Q15361 905 aaPredicted RBP4.8□□□□□ -1.64
COPA-204ENST00000481522 FAM47AQ5JRC9 791 aa4.8□□□□□ -1.64
COPA-204ENST00000481522 RRP12Q5JTH9 1297 aaKnown RBP4.8□□□□□ -1.64
COPA-204ENST00000481522 MFSD14BQ5SR56 506 aa4.8□□□□□ -1.64
COPA-204ENST00000481522 ODR4Q5SWX8 454 aa4.8□□□□□ -1.64
COPA-204ENST00000481522 SLC25A43Q8WUT9 341 aaPredicted RBP4.8□□□□□ -1.64
COPA-204ENST00000481522 C7orf25Q9BPX7 421 aa4.8□□□□□ -1.64
COPA-204ENST00000481522 NDC1Q9BTX1 674 aa4.8□□□□□ -1.64
COPA-204ENST00000481522 MANSC1Q9H8J5 431 aa4.8□□□□□ -1.64
COPA-204ENST00000481522 AASDHPPTQ9NRN7 309 aa4.8□□□□□ -1.64
COPA-204ENST00000481522 AJAP1Q9UKB5 411 aaPredicted RBP4.8□□□□□ -1.64
COPA-204ENST00000481522 LUC7L2Q9Y383 392 aaKnown RBP4.8□□□□□ -1.64
COPA-204ENST00000481522 BLMP54132 1417 aaPredicted RBP4.8□□□□□ -1.64
COPA-204ENST00000481522 MEGF6O75095 1541 aa4.79□□□□□ -1.64
COPA-204ENST00000481522 KDM5BQ9UGL1 1544 aa4.79□□□□□ -1.64
COPA-204ENST00000481522 TBKBP1A7MCY6 615 aa4.79□□□□□ -1.64
COPA-204ENST00000481522 GPR32O75388 356 aa4.79□□□□□ -1.64
COPA-204ENST00000481522 RPS6KA4O75676 772 aa4.79□□□□□ -1.64
COPA-204ENST00000481522 GCP02774 474 aa4.79□□□□□ -1.64
COPA-204ENST00000481522 SPATA31D3P0C874 917 aa4.79□□□□□ -1.64
COPA-204ENST00000481522 PLA2G5P39877 138 aa4.79□□□□□ -1.64
COPA-204ENST00000481522 CLRN1P58418 232 aa4.79□□□□□ -1.64
COPA-204ENST00000481522 RAP2BP61225 183 aa4.79□□□□□ -1.64
COPA-204ENST00000481522 BMT2Q1RMZ1 405 aa4.79□□□□□ -1.64
COPA-204ENST00000481522 PLEKHG6Q3KR16 790 aa4.79□□□□□ -1.64
COPA-204ENST00000481522 ANKS6Q68DC2 871 aa4.79□□□□□ -1.64
COPA-204ENST00000481522 DRICH1Q6PGQ1 229 aaPredicted RBP4.79□□□□□ -1.64
COPA-204ENST00000481522 SPATA31D4Q6ZUB0 917 aa4.79□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms