RNA–Protein interactions for RNA: ENST00000480468.1

SIK3-210, Transcript of SIK family kinase 3, humanhuman

TSL 1 (best)

Gene SIK3, Length 2,237 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIK3-210ENST00000480468 PIGSQ96S52 555 aa11.29□□□□□ -0.6
SIK3-210ENST00000480468 RIOX1Q9H6W3 641 aa11.29□□□□□ -0.6
SIK3-210ENST00000480468 MKNK2Q9HBH9 465 aa11.29□□□□□ -0.6
SIK3-210ENST00000480468 ETNK2Q9NVF9 386 aa11.29□□□□□ -0.6
SIK3-210ENST00000480468 ZNF232Q9UNY5 417 aa11.29□□□□□ -0.6
SIK3-210ENST00000480468 CFAP69A5D8W1 941 aa11.29□□□□□ -0.6
SIK3-210ENST00000480468 TMEM110-MUSTN1A8MSY1 372 aa11.29□□□□□ -0.6
SIK3-210ENST00000480468 HNRNPRO43390 633 aaKnown RBP11.29□□□□□ -0.6
SIK3-210ENST00000480468 AP1G1O43747 822 aa11.29□□□□□ -0.6
SIK3-210ENST00000480468 SPOPO43791 374 aa11.29□□□□□ -0.6
SIK3-210ENST00000480468 RNASEH1O60930 286 aaKnown RBP11.29□□□□□ -0.6
SIK3-210ENST00000480468 TGDSO95455 350 aa11.29□□□□□ -0.6
SIK3-210ENST00000480468 USP17L8P0C7I0 530 aa11.29□□□□□ -0.6
SIK3-210ENST00000480468 DLATP10515 647 aaKnown RBP11.29□□□□□ -0.6
SIK3-210ENST00000480468 GZMAP12544 262 aa11.29□□□□□ -0.6
SIK3-210ENST00000480468 CA4P22748 312 aa11.29□□□□□ -0.6
SIK3-210ENST00000480468 PSMC2P35998 433 aaKnown RBP11.29□□□□□ -0.6
SIK3-210ENST00000480468 PGM1P36871 562 aa11.29□□□□□ -0.6
SIK3-210ENST00000480468 CCNFP41002 786 aa11.29□□□□□ -0.6
SIK3-210ENST00000480468 AP2B1P63010 937 aa11.29□□□□□ -0.6
SIK3-210ENST00000480468 CDK16Q00536 496 aa11.29□□□□□ -0.6
SIK3-210ENST00000480468 SLC1A5Q15758 541 aa11.29□□□□□ -0.6
SIK3-210ENST00000480468 RBM26Q5T8P6 1007 aaKnown RBP11.29□□□□□ -0.6
SIK3-210ENST00000480468 NOP9Q86U38 636 aaKnown RBP11.29□□□□□ -0.6
SIK3-210ENST00000480468 DGCR14Q96DF8 476 aaKnown RBP11.29□□□□□ -0.6
SIK3-210ENST00000480468 DDX27Q96GQ7 796 aaKnown RBP11.29□□□□□ -0.6
SIK3-210ENST00000480468 TRIM55Q9BYV6 548 aa11.29□□□□□ -0.6
SIK3-210ENST00000480468 INTS2Q9H0H0 1204 aaKnown RBP11.29□□□□□ -0.6
SIK3-210ENST00000480468 SEPT11Q9NVA2 429 aaKnown RBP11.29□□□□□ -0.6
SIK3-210ENST00000480468 HEY2Q9UBP5 337 aa11.29□□□□□ -0.6
SIK3-210ENST00000480468 NEU2Q9Y3R4 380 aa11.29□□□□□ -0.6
SIK3-210ENST00000480468 LAMB2P55268 1798 aa11.29□□□□□ -0.6
SIK3-210ENST00000480468 POTEB3A0JP26 581 aa11.28□□□□□ -0.6
SIK3-210ENST00000480468 STRNO43815 780 aa11.28□□□□□ -0.6
SIK3-210ENST00000480468 LGR5O75473 907 aa11.28□□□□□ -0.6
SIK3-210ENST00000480468 ESRRAP11474 423 aaPredicted RBP11.28□□□□□ -0.6
SIK3-210ENST00000480468 ADCY8P40145 1251 aa11.28□□□□□ -0.6
SIK3-210ENST00000480468 MAGEA4P43358 317 aa11.28□□□□□ -0.6
SIK3-210ENST00000480468 CD151P48509 253 aa11.28□□□□□ -0.6
SIK3-210ENST00000480468 CLCN2P51788 898 aa11.28□□□□□ -0.6
SIK3-210ENST00000480468 CENPCQ03188 943 aa11.28□□□□□ -0.6
SIK3-210ENST00000480468 PPP2R5CQ13362 524 aa11.28□□□□□ -0.6
SIK3-210ENST00000480468 CHRNA2Q15822 529 aa11.28□□□□□ -0.6
SIK3-210ENST00000480468 C6orf163Q5TEZ5 329 aa11.28□□□□□ -0.6
SIK3-210ENST00000480468 TMCO4Q5TGY1 634 aa11.28□□□□□ -0.6
SIK3-210ENST00000480468 POTEBQ6S5H4 581 aa11.28□□□□□ -0.6
SIK3-210ENST00000480468 RINLQ6ZS11 566 aa11.28□□□□□ -0.6
SIK3-210ENST00000480468 SFR1Q86XK3 245 aa11.28□□□□□ -0.6
SIK3-210ENST00000480468 FAM186BQ8IYM0 893 aa11.28□□□□□ -0.6
SIK3-210ENST00000480468 ZNF444Q8N0Y2 327 aaPredicted RBP11.28□□□□□ -0.6
SIK3-210ENST00000480468 ZCCHC9Q8N567 271 aaKnown RBP11.28□□□□□ -0.6
SIK3-210ENST00000480468 CCDC89Q8N998 374 aa11.28□□□□□ -0.6
SIK3-210ENST00000480468 C1orf54Q8WWF1 131 aa11.28□□□□□ -0.6
SIK3-210ENST00000480468 ZNF653Q96CK0 615 aa11.28□□□□□ -0.6
SIK3-210ENST00000480468 PHACTR1Q9C0D0 580 aa11.28□□□□□ -0.6
SIK3-210ENST00000480468 DNAJC17Q9NVM6 304 aaKnown RBP11.28□□□□□ -0.6
SIK3-210ENST00000480468 SLC24A2Q9UI40 661 aa11.28□□□□□ -0.6
SIK3-210ENST00000480468 STX8Q9UNK0 236 aa11.28□□□□□ -0.6
SIK3-210ENST00000480468 CLDN3O15551 220 aa11.28□□□□□ -0.6
SIK3-210ENST00000480468 TOM1O60784 492 aa11.28□□□□□ -0.6
SIK3-210ENST00000480468 FKBP6O75344 327 aa11.28□□□□□ -0.6
SIK3-210ENST00000480468 IL1BP01584 269 aa11.28□□□□□ -0.6
SIK3-210ENST00000480468 CYP1A2P05177 515 aa11.28□□□□□ -0.6
SIK3-210ENST00000480468 FGFR1P11362 822 aa11.28□□□□□ -0.6
SIK3-210ENST00000480468 CYP19A1P11511 503 aaPredicted RBP11.28□□□□□ -0.6
SIK3-210ENST00000480468 ETS2P15036 469 aa11.28□□□□□ -0.6
SIK3-210ENST00000480468 ACTR3P61158 418 aa11.28□□□□□ -0.6
SIK3-210ENST00000480468 AAGABQ6PD74 315 aa11.28□□□□□ -0.6
SIK3-210ENST00000480468 TMPRSS6Q8IU80 811 aa11.28□□□□□ -0.6
SIK3-210ENST00000480468 KIAA0825Q8IV33 1275 aa11.28□□□□□ -0.6
SIK3-210ENST00000480468 RNF168Q8IYW5 571 aaPredicted RBP11.28□□□□□ -0.6
SIK3-210ENST00000480468 CCDC110Q8TBZ0 833 aa11.28□□□□□ -0.6
SIK3-210ENST00000480468 DYDC2Q96IM9 177 aa11.28□□□□□ -0.6
SIK3-210ENST00000480468 C9orf72Q96LT7 481 aa11.28□□□□□ -0.6
SIK3-210ENST00000480468 DCLK3Q9C098 648 aa11.28□□□□□ -0.6
SIK3-210ENST00000480468 VPS11Q9H270 941 aa11.28□□□□□ -0.6
SIK3-210ENST00000480468 CPVLQ9H3G5 476 aa11.28□□□□□ -0.6
SIK3-210ENST00000480468 ZHX3Q9H4I2 956 aa11.28□□□□□ -0.6
SIK3-210ENST00000480468 C17orf75Q9HAS0 396 aa11.28□□□□□ -0.6
SIK3-210ENST00000480468 TIMMDC1Q9NPL8 285 aa11.28□□□□□ -0.6
SIK3-210ENST00000480468 UVRAGQ9P2Y5 699 aa11.28□□□□□ -0.6
SIK3-210ENST00000480468 NIP7Q9Y221 180 aaKnown RBP eCLIP11.28□□□□□ -0.6
SIK3-210ENST00000480468 A0A0J9YVX5 310 aa11.27□□□□□ -0.61
SIK3-210ENST00000480468 TMEM221A6NGB7 291 aa11.27□□□□□ -0.61
SIK3-210ENST00000480468 BUD23O43709 281 aaKnown RBP11.27□□□□□ -0.61
SIK3-210ENST00000480468 MARCH6O60337 910 aa11.27□□□□□ -0.61
SIK3-210ENST00000480468 CIB2O75838 187 aa11.27□□□□□ -0.61
SIK3-210ENST00000480468 KRT15P19012 456 aa11.27□□□□□ -0.61
SIK3-210ENST00000480468 AMPD1P23109 780 aa11.27□□□□□ -0.61
SIK3-210ENST00000480468 SERPINB3P29508 390 aa11.27□□□□□ -0.61
SIK3-210ENST00000480468 TNNI2P48788 182 aa11.27□□□□□ -0.61
SIK3-210ENST00000480468 ARFIP2P53365 341 aa11.27□□□□□ -0.61
SIK3-210ENST00000480468 ARHGAP4P98171 946 aa11.27□□□□□ -0.61
SIK3-210ENST00000480468 ASPHQ12797 758 aa11.27□□□□□ -0.61
SIK3-210ENST00000480468 TTLL12Q14166 644 aaPredicted RBP11.27□□□□□ -0.61
SIK3-210ENST00000480468 PKN2Q16513 984 aaKnown RBP11.27□□□□□ -0.61
SIK3-210ENST00000480468 SUSD4Q5VX71 490 aa11.27□□□□□ -0.61
SIK3-210ENST00000480468 TBC1D9BQ66K14 1250 aa11.27□□□□□ -0.61
SIK3-210ENST00000480468 LVRNQ6Q4G3 990 aa11.27□□□□□ -0.61
SIK3-210ENST00000480468 RFWD2Q8NHY2 731 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 62.1 ms