RNA–Protein interactions for RNA: ENST00000480353.5

CDK9-203, Transcript of cyclin dependent kinase 9, humanhuman

TSL 2

Gene CDK9, Length 706 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK9-203ENST00000480353 DDX12PQ92771 950 aa16.71■□□□□ 0.27
CDK9-203ENST00000480353 C18orf25Q96B23 403 aaPredicted RBP16.71■□□□□ 0.27
CDK9-203ENST00000480353 ZMAT2Q96NC0 199 aaKnown RBP16.71■□□□□ 0.27
CDK9-203ENST00000480353 PRKD2Q9BZL6 878 aa16.71■□□□□ 0.27
CDK9-203ENST00000480353 WDR6Q9NNW5 1121 aaKnown RBP16.71■□□□□ 0.27
CDK9-203ENST00000480353 EXOC7Q9UPT5 735 aa16.71■□□□□ 0.27
CDK9-203ENST00000480353 CDY1Q9Y6F8 540 aa16.71■□□□□ 0.27
CDK9-203ENST00000480353 C8AP07357 584 aa16.7■□□□□ 0.26
CDK9-203ENST00000480353 GAP43P17677 238 aa16.7■□□□□ 0.26
CDK9-203ENST00000480353 FGFR3P22607 806 aa16.7■□□□□ 0.26
CDK9-203ENST00000480353 ARPP19P56211 112 aa16.7■□□□□ 0.26
CDK9-203ENST00000480353 SPAG1Q07617 926 aa16.7■□□□□ 0.26
CDK9-203ENST00000480353 FOXD4L6Q3SYB3 417 aaPredicted RBP16.7■□□□□ 0.26
CDK9-203ENST00000480353 ADALQ6DHV7 355 aa16.7■□□□□ 0.26
CDK9-203ENST00000480353 SLFN12LQ6IEE8 588 aa16.7■□□□□ 0.26
CDK9-203ENST00000480353 FOXD4L3Q6VB84 417 aaPredicted RBP16.7■□□□□ 0.26
CDK9-203ENST00000480353 SFR1Q86XK3 245 aa16.7■□□□□ 0.26
CDK9-203ENST00000480353 PDILTQ8N807 584 aa16.7■□□□□ 0.26
CDK9-203ENST00000480353 APPL2Q8NEU8 664 aa16.7■□□□□ 0.26
CDK9-203ENST00000480353 LRRC27Q9C0I9 530 aa16.7■□□□□ 0.26
CDK9-203ENST00000480353 TFIP11Q9UBB9 837 aaKnown RBP16.7■□□□□ 0.26
CDK9-203ENST00000480353 MTRRQ9UBK8 725 aa16.7■□□□□ 0.26
CDK9-203ENST00000480353 SEL1LQ9UBV2 794 aa16.7■□□□□ 0.26
CDK9-203ENST00000480353 FBXW11Q9UKB1 542 aa16.7■□□□□ 0.26
CDK9-203ENST00000480353 UBQLN1Q9UMX0 589 aaKnown RBP16.7■□□□□ 0.26
CDK9-203ENST00000480353 SYN3O14994 580 aa16.69■□□□□ 0.26
CDK9-203ENST00000480353 PIGRP01833 764 aa16.69■□□□□ 0.26
CDK9-203ENST00000480353 ASGR2P07307 311 aa16.69■□□□□ 0.26
CDK9-203ENST00000480353 TNFSF9P41273 254 aa16.69■□□□□ 0.26
CDK9-203ENST00000480353 NASPP49321 788 aaPredicted RBP16.69■□□□□ 0.26
CDK9-203ENST00000480353 GTF2BQ00403 316 aa16.69■□□□□ 0.26
CDK9-203ENST00000480353 ZC2HC1CQ53FD0 456 aaPredicted RBP16.69■□□□□ 0.26
CDK9-203ENST00000480353 LILRA6Q6PI73 481 aa16.69■□□□□ 0.26
CDK9-203ENST00000480353 GET4Q7L5D6 327 aaPredicted RBP16.69■□□□□ 0.26
CDK9-203ENST00000480353 MAP4K3Q8IVH8 894 aa16.69■□□□□ 0.26
CDK9-203ENST00000480353 CD302Q8IX05 232 aa16.69■□□□□ 0.26
CDK9-203ENST00000480353 SYCP3Q8IZU3 236 aa16.69■□□□□ 0.26
CDK9-203ENST00000480353 C3orf58Q8NDZ4 430 aa16.69■□□□□ 0.26
CDK9-203ENST00000480353 SLC7A14Q8TBB6 771 aa16.69■□□□□ 0.26
CDK9-203ENST00000480353 POMGNT1Q8WZA1 660 aa16.69■□□□□ 0.26
CDK9-203ENST00000480353 HVCN1Q96D96 273 aa16.69■□□□□ 0.26
CDK9-203ENST00000480353 RHOBTB2Q9BYZ6 727 aa16.69■□□□□ 0.26
CDK9-203ENST00000480353 MFSD1Q9H3U5 465 aa16.69■□□□□ 0.26
CDK9-203ENST00000480353 TBC1D7Q9P0N9 293 aa16.69■□□□□ 0.26
CDK9-203ENST00000480353 BACE2Q9Y5Z0 518 aa16.69■□□□□ 0.26
CDK9-203ENST00000480353 MYMKA6NI61 221 aa16.68■□□□□ 0.26
CDK9-203ENST00000480353 LACTBL1A8MY62 500 aa16.68■□□□□ 0.26
CDK9-203ENST00000480353 PRRG1O14668 218 aa16.68■□□□□ 0.26
CDK9-203ENST00000480353 CCL16O15467 120 aa16.68■□□□□ 0.26
CDK9-203ENST00000480353 GCNT3O95395 438 aa16.68■□□□□ 0.26
CDK9-203ENST00000480353 HNRNPA1P09651 372 aaKnown RBP eCLIP16.68■□□□□ 0.26
CDK9-203ENST00000480353 RAB33AQ14088 237 aa16.68■□□□□ 0.26
CDK9-203ENST00000480353 POSTNQ15063 836 aa16.68■□□□□ 0.26
CDK9-203ENST00000480353 VARS2Q5ST30 1063 aaKnown RBP16.68■□□□□ 0.26
CDK9-203ENST00000480353 AXDND1Q5T1B0 1012 aaPredicted RBP16.68■□□□□ 0.26
CDK9-203ENST00000480353 ZNF280DQ6N043 979 aa16.68■□□□□ 0.26
CDK9-203ENST00000480353 DSTYKQ6XUX3 929 aa16.68■□□□□ 0.26
CDK9-203ENST00000480353 USP37Q86T82 979 aa16.68■□□□□ 0.26
CDK9-203ENST00000480353 CCDC65Q8IXS2 484 aa16.68■□□□□ 0.26
CDK9-203ENST00000480353 LINC00301Q8NCQ3 95 aa16.68■□□□□ 0.26
CDK9-203ENST00000480353 BEST2Q8NFU1 509 aa16.68■□□□□ 0.26
CDK9-203ENST00000480353 ACCSQ96QU6 501 aa16.68■□□□□ 0.26
CDK9-203ENST00000480353 TSPAN18Q96SJ8 248 aa16.68■□□□□ 0.26
CDK9-203ENST00000480353 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP16.68■□□□□ 0.26
CDK9-203ENST00000480353 TUBGCP4Q9UGJ1 667 aa16.68■□□□□ 0.26
CDK9-203ENST00000480353 AGO2Q9UKV8 859 aaKnown RBP16.68■□□□□ 0.26
CDK9-203ENST00000480353 ARIH1Q9Y4X5 557 aaPredicted RBP16.68■□□□□ 0.26
CDK9-203ENST00000480353 PCDHB13Q9Y5F0 798 aa16.68■□□□□ 0.26
CDK9-203ENST00000480353 MORC2Q9Y6X9 1032 aaPredicted RBP16.68■□□□□ 0.26
CDK9-203ENST00000480353 A0A0B4J269 797 aa16.67■□□□□ 0.26
CDK9-203ENST00000480353 TTC26A0AVF1 554 aa16.67■□□□□ 0.26
CDK9-203ENST00000480353 CUTAO60888 179 aa16.67■□□□□ 0.26
CDK9-203ENST00000480353 PPP6R2O75170 966 aa16.67■□□□□ 0.26
CDK9-203ENST00000480353 YEATS4O95619 227 aa16.67■□□□□ 0.26
CDK9-203ENST00000480353 LRG1P02750 347 aa16.67■□□□□ 0.26
CDK9-203ENST00000480353 ZSCAN22P10073 491 aaPredicted RBP16.67■□□□□ 0.26
CDK9-203ENST00000480353 RFX1P22670 979 aa16.67■□□□□ 0.26
CDK9-203ENST00000480353 FSHRP23945 695 aa16.67■□□□□ 0.26
CDK9-203ENST00000480353 AMPD3Q01432 767 aa16.67■□□□□ 0.26
CDK9-203ENST00000480353 UVSSAQ2YD98 709 aa16.67■□□□□ 0.26
CDK9-203ENST00000480353 CTXN3Q4LDR2 81 aa16.67■□□□□ 0.26
CDK9-203ENST00000480353 STXBP4Q6ZWJ1 553 aa16.67■□□□□ 0.26
CDK9-203ENST00000480353 ZNF720Q7Z2F6 126 aa16.67■□□□□ 0.26
CDK9-203ENST00000480353 BMP8AQ7Z5Y6 402 aa16.67■□□□□ 0.26
CDK9-203ENST00000480353 GRASPQ7Z6J2 395 aaPredicted RBP16.67■□□□□ 0.26
CDK9-203ENST00000480353 FEZF2Q8TBJ5 459 aa16.67■□□□□ 0.26
CDK9-203ENST00000480353 NOC3LQ8WTT2 800 aaKnown RBP16.67■□□□□ 0.26
CDK9-203ENST00000480353 KCNN1Q92952 543 aa16.67■□□□□ 0.26
CDK9-203ENST00000480353 ZNF707Q96C28 371 aaPredicted RBP16.67■□□□□ 0.26
CDK9-203ENST00000480353 HAPLN2Q9GZV7 340 aa16.67■□□□□ 0.26
CDK9-203ENST00000480353 ST6GALNAC4Q9H4F1 302 aa16.67■□□□□ 0.26
CDK9-203ENST00000480353 PANK4Q9NVE7 773 aa16.67■□□□□ 0.26
CDK9-203ENST00000480353 IGSF9Q9P2J2 1179 aa16.67■□□□□ 0.26
CDK9-203ENST00000480353 FBXL21Q9UKT6 434 aa16.67■□□□□ 0.26
CDK9-203ENST00000480353 TECTAO75443 2155 aa16.67■□□□□ 0.26
CDK9-203ENST00000480353 ADAM12O43184 909 aa16.66■□□□□ 0.26
CDK9-203ENST00000480353 F13A1P00488 732 aa16.66■□□□□ 0.26
CDK9-203ENST00000480353 CYP3A5P20815 502 aa16.66■□□□□ 0.26
CDK9-203ENST00000480353 HOXA9P31269 272 aa16.66■□□□□ 0.26
CDK9-203ENST00000480353 PLA2G5P39877 138 aa16.66■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms